FFCP PHASE1:Hg19::chr12:10875733..10875752,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8531 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2428 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=153bp_to_ENST00000279550_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_8_at_CSDA_5end | |||
|id=chr12:10875733..10875752,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002032;1.05e-10;1!CL:0000557;1.05e-10;1!CL:0000138;2.82e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,3.57e-07,6;CL:0000138,3.57e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;4.57e-11;1!DOID:4549;4.57e-11;1!DOID:5861;4.57e-11;1!DOID:6496;4.57e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,5.57e-11,1;DOID:4549,5.57e-11,1;DOID:5861,5.57e-11,1;DOID:6496,5.57e-11,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;3.40e-11;1!UBERON:0000026;3.40e-11;1!UBERON:0008784;3.40e-11;1!UBERON:0006058;3.40e-11;1!UBERON:0003663;3.40e-11;1!UBERON:0004256;3.40e-11;1!UBERON:0004708;3.40e-11;1!UBERON:0002101;3.40e-11;1!UBERON:0004709;3.40e-11;1!UBERON:0002529;3.40e-11;1!UBERON:0010538;3.40e-11;1!UBERON:0003661;3.40e-11;1!UBERON:0010890;3.40e-11;1!UBERON:0002471;3.40e-11;1!UBERON:0001383;3.40e-11;1!UBERON:0010758;3.40e-11;1!UBERON:0010707;3.40e-11;1!UBERON:0000978;3.40e-11;1!UBERON:0002103;3.40e-11;1!UBERON:0001665;3.40e-11;1!UBERON:0003823;3.40e-11;1!UBERON:0000154;3.40e-11;1!UBERON:0010709;3.40e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.41e-11,1;UBERON:0001389,3.41e-11,1;UBERON:0000026,3.41e-11,1;UBERON:0008784,3.41e-11,1;UBERON:0006058,3.41e-11,1;UBERON:0003663,3.41e-11,1;UBERON:0004256,3.41e-11,1;UBERON:0004708,3.41e-11,1;UBERON:0002101,3.41e-11,1;UBERON:0004709,3.41e-11,1;UBERON:0002529,3.41e-11,1;UBERON:0010538,3.41e-11,1;UBERON:0003661,3.41e-11,1;UBERON:0010890,3.41e-11,1;UBERON:0002471,3.41e-11,1;UBERON:0001383,3.41e-11,1;UBERON:0004357,3.41e-11,1;UBERON:0004347,3.41e-11,1;UBERON:0005420,3.41e-11,1;UBERON:0005732,3.41e-11,1;UBERON:0010758,3.41e-11,1;UBERON:0010707,3.41e-11,1;UBERON:0000978,3.41e-11,1;UBERON:0002103,3.41e-11,1;UBERON:0001665,3.41e-11,1;UBERON:0003823,3.41e-11,1;UBERON:0000154,3.41e-11,1;UBERON:0010709,3.41e-11,1;UBERON:0005733,3.41e-11,1;UBERON:0005730,3.41e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.410623275218653,0,0.229240217243854,0.164201178899891,0.236132343941038,0.393364276848904,0,0.154816123316076,0,0,0.739508020333575,0,0,0.587200878669695,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,1.17447437874188,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0.802320587350522,0,0,0,0.255725123687061,0,1.00267582127178,0,0,0,0.0945348171640679,0,0.175669571386252,36.6741411393595,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0,0.366403487860815,0,0,0,0,0,0.132409180813219,0.286836620748814,0,1.12135520028461,0,0,0,0,0,0.151357427644931,0,0,0,0,0.298897361103602,0,0,0,0.204154171254893,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0,0,0.243947412259191,1.06023814657188,0.464775771478074,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,1.03993478527958,0,0.231860809950154,0.352226082707465,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0.144119953416961,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,1.41849132023278,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0,0,0,2.27407504055985,0,0,0,0,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0.276242966807689,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.223874754722178,0.438519753291869,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,1.30012049207304,0,0.096670718292122,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0.532306030317022,0,0.37064843820784,0,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0.7133421029625,0.354761064070598,0,0,0,0,0.192444225451024,0,0,0.188287601553558,0,1.68471475667626,0.443430153536676,0,0,0.764637207142375,0,0.238231775457789,0,0,0,2.37937552888281,0,0,0.245040215981032,0,0,0,0.797131363644112,0,0.191505370132367,0,0.649243880549111,0.280797178113459,0.228234679033192,0.313359791546046,0,0.169291777801603,0.1605880751037,0,0.425846237690326,0,0,0.447352215784832,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0.586032717087576,0.242721043499027,0,0,0,0,0,0,0,0,0.659215496907038,0,0.19924798825107,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0.21787692703798,0.139423744278603,0.230850775511391,0.227884111694002,0,0,0,0,0.274792780205587,0,1.02193298195737,0.156980256395025,0.332423363800313,0,0,0.167821586975843,0,0.476809736941136,0,0,0,0,0,0.0884575645033392,0,0,0.123563938946503,0.104421949505455,0.134802265961354,0,0,0.547364367646998,0.19566461893209,0.242780379534093,0,0,0,0.31593289814244,0.60129367765797,0.207376382794494,0,0,0,0,0,0,0,0,0.174118413160805,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,2.11814704059601,0,0,0.397429223405979,0.0633107959558787,0,0,0,0.799238438328521,0,0.229073192331831,0,0,0,0,0,0,0.305994652908965,0,0,0,1.27746588066972,0,0.262887354279314,0,0,0,0.199679000498991,0.858452096273142,0.669514372325618,0.268733889946905,0,0,0,0.164831716762333,0,0,0.254019996197353,0,0.136203406111576,0,0.275078873194468,0.83088067605837,0.2249738915515,0.77380195455795,0,0,0.0788057072991982,0.104909176269996,0.211200673038813,0,0,0.714695326373367,0.662091970365432,0.5085370753095,0,0,0,1.19730191562487,0.082092520749339,0,0,0,1.32506888912221,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0.306345576763462,0.327872630709804,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0.181848659202559,0.322231671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| |||
|short_description=p8@CSDA | |||
}} |
Revision as of 12:09, 11 January 2014
Short description: | p8@CSDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CSDA_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 153bp_to_ENST00000279550_5end |
EntrezGene: | CSDA |
HGNC: | 2428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 3.57e-07 | 6 |
chondrocyte | 3.57e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 3.41e-11 | 1 |
soleus muscle | 3.41e-11 | 1 |
appendage | 3.41e-11 | 1 |
lower limb segment | 3.41e-11 | 1 |
multi-limb segment region | 3.41e-11 | 1 |
hindlimb muscle | 3.41e-11 | 1 |
hindlimb zeugopod muscle | 3.41e-11 | 1 |
paired limb/fin | 3.41e-11 | 1 |
limb | 3.41e-11 | 1 |
pelvic appendage | 3.41e-11 | 1 |
limb segment | 3.41e-11 | 1 |
paired limb/fin segment | 3.41e-11 | 1 |
limb muscle | 3.41e-11 | 1 |
pelvic complex muscle | 3.41e-11 | 1 |
zeugopod | 3.41e-11 | 1 |
muscle of leg | 3.41e-11 | 1 |
paired limb/fin bud | 3.41e-11 | 1 |
limb bud | 3.41e-11 | 1 |
pelvic appendage bud | 3.41e-11 | 1 |
limb/fin field | 3.41e-11 | 1 |
subdivision of organism along appendicular axis | 3.41e-11 | 1 |
appendage girdle complex | 3.41e-11 | 1 |
leg | 3.41e-11 | 1 |
hindlimb | 3.41e-11 | 1 |
triceps surae | 3.41e-11 | 1 |
hindlimb zeugopod | 3.41e-11 | 1 |
posterior region of body | 3.41e-11 | 1 |
pelvic complex | 3.41e-11 | 1 |
limb field | 3.41e-11 | 1 |
hindlimb/pelvic fin field | 3.41e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 5.57e-11 | 1 |
extraosseous chondrosarcoma | 5.57e-11 | 1 |
myxoid chondrosarcoma | 5.57e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 5.57e-11 | 1 |