FFCP PHASE1:Hg19::chr13:31191989..31192005,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10208 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20294 | |||
|TSSclassifier=strong | |||
|UniProt=Q5W0Q7 | |||
|association_with_transcript=69bp_to_ENST00000255304_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_4_at_USPL1_5end | |||
|id=chr13:31191989..31192005,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.28e-24!140;CL:0002031!2.09e-20!124;CL:0002087!2.12e-20!119;CL:0000037!2.66e-18!172;CL:0000566!2.66e-18!172;CL:0000766!1.04e-17!76;CL:0002032!1.07e-16!165;CL:0000837!1.07e-16!165;CL:0000860!2.86e-16!45;CL:0002057!3.68e-16!42;CL:0000988!6.54e-16!182;CL:0000839!1.52e-14!70;CL:0002194!6.57e-13!63;CL:0000576!6.57e-13!63;CL:0000040!6.57e-13!63;CL:0000559!6.57e-13!63;CL:0000557!9.06e-13!71;CL:0002009!2.12e-12!65;CL:0000763!4.45e-10!112;CL:0000049!4.45e-10!112;CL:0000838!4.83e-07!52;CL:0000542!4.86e-07!53;CL:0000051!4.86e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.10e-46;33!CL:0002057;8.10e-46;33!CL:0000473;2.20e-32;39!CL:0000234;2.20e-32;39!CL:0000576;9.63e-22;48!CL:0000766;4.41e-15;69!CL:0000775;1.24e-09;3!CL:0000094;3.72e-09;8!CL:0002087;7.99e-09;104!CL:0000763;4.75e-08;100!CL:0000738;2.39e-07;136!CL:0000771;5.02e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.57e-39,42;CL:0002057,4.57e-39,42;CL:0000766,9.86e-34,72;CL:0000473,3.52e-33,48;CL:0000234,3.52e-33,48;CL:0000738,1.13e-26,136;CL:0000839,1.49e-25,66;CL:0000557,4.71e-25,67;CL:0002194,5.77e-25,59;CL:0000576,5.77e-25,59;CL:0000040,5.77e-25,59;CL:0000559,5.77e-25,59;CL:0002009,6.57e-24,61;CL:0002087,1.58e-21,115;CL:0002031,2.00e-20,120;CL:0000763,2.29e-19,108;CL:0000049,2.29e-19,108;CL:0000037,2.48e-19,168;CL:0002032,2.16e-18,161;CL:0000837,2.16e-18,161;CL:0000988,9.36e-18,177;CL:0000775,1.24e-09,3;CL:0000094,3.74e-09,8;CL:0000771,5.03e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-28;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.28e-14!102;UBERON:0003061!1.28e-14!102;UBERON:0002193!3.46e-13!112;UBERON:0002371!1.30e-10!80;UBERON:0001474!7.57e-10!86;UBERON:0007023!1.15e-08!115;UBERON:0002405!5.35e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.95e-25,98;UBERON:0003061,7.95e-25,98;UBERON:0002193,5.08e-23,108;UBERON:0002371,3.72e-21,76;UBERON:0002405,3.43e-20,93;UBERON:0001474,4.90e-19,82;UBERON:0004765,1.18e-16,90;UBERON:0001434,3.16e-14,100;UBERON:0003081,5.17e-10,203 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0.672325146451775,0,0,0.487932798790507,0.123121058076788,0,0,0,0.273748850145768,0,0.61130724598361,0.246301768349837,0.0787107813136792,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0,0.309868802321207,0.284338464974843,0.587200878669695,0.553995408531877,0.601633342410425,0.434021741431704,0.223915474239924,0,0.77272670290256,1.16318591023652,0.755751887377619,4.12392904019288,3.25400651667958,7.81218987241469,6.50383378879718,1.7261543539329,2.56160706529101,4.96612682766029,4.48169384957604,5.80936215225443,13.5426486594342,1.69418105588344,3.82068610080984,4.49446968890169,2.14258724659632,1.92557416245656,5.75403413219137,2.96866170168044,1.59570926097305,3.40979800426155,1.7412554317715,0.56738522469114,6.85104473895132,9.2962006144995,3.65038042894141,6.95004303056373,0.605399502633369,1.84138817993782,3.16462387440884,0.211255286311942,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0,0,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0.800791974072025,0.574752439954483,0.661044872784862,0.954053754535364,1.1384259382189,0.587237189370939,1.14681968437569,0,0,0,0.196709770113833,0.393010762749165,0.822405995998037,0.167186495390678,0.32592226663359,0,0,0.222820913770347,0,0.443067789167242,0,0.128091319725675,0,0.328875809207352,0.276350017785848,0,0.593146252648242,0,0,0.679856056185397,0.383220493601921,0.68725489096526,0.506039384039006,0.637130828648193,0.651083453856419,0,0.301150238155546,0.383959833463255,1.24930726552346,1.18388626022008,0,1.00803371612366,1.06976078313403,0.868946423296794,0,0,0.383587685530591,0,0,0,0,0,0.189069634328136,0.665188192387692,1.49319135678314,0.458426764241994,0,0,0.324547393654683,0.348259474598534,0.132957960518865,0.238490624305342,0.571994910780128,0,0,0,0,0.56530794192401,0,0.825354125820202,0,0,0.35576626268671,0.66944122552934,0,0.760272105718513,0.488124115096339,0,0.81014194788176,0.446498641420399,0.898117490504679,0.675668882899933,0,0.949265659568129,0.366403487860815,17.1314542666882,46.533631697799,0,0,0.379891534993739,0.794455084879313,0,0.354668382198357,0,0,0,0.622422070799533,0.269421344139376,0.490385709340376,0.151357427644931,1.15235184896,0,0,0,0,0,0.161872944368132,0,0.204154171254893,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0.900273288253207,0,0,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0.132529768321485,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0.643240938192885,0,0,0,0.591534000199219,0.168584690078102,0.482022059766964,0.110293972732394,0,0,0.269662616320329,0.392442930250692,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.939269553886573,0.288732895522148,0,0,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0,0.176096868026452,3.93923419527467,0.720599767084807,5.93339437103986,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.1466765716419,0.258543431515556,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.336255431980582,0.591092280605782,1.2937654491571,0.385029108839245,0,0,0.773288812777695,0.335032530668698,0,23.2192177423627,11.966458368161,14.5045429702612,0,0,0,0,0,0,0.585707074963566,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,1.86091223510599,1.2942852049117,0.533637789017222,0,0,0,0,0.153461973288062,0,0.128139149255701,1.53512174720011,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0.231046011313244,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0.657779629937804,0.784306353074702,0,0,0.325378394664303,5.46117361732928,0.183138929636687,0.495056999523528,0,0,0,0.096670718292122,0,0,0.275673144969061,0.214840489736547,0.145016693914229,0.255679882248303,0.178064071293475,0,0,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0.953150969619124,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0.655894752046633,0,0,0,0.286822704408103,0.491245205065606,0,0.709522128141196,0,0,0,0,0,0,0,6.59006605437454,0,0,0,0.229723400206959,0.507447609232169,2.29391162142713,0.569647187174163,0.238231775457789,0.822724546172388,1.29694662238543,2.70015718619057,0,0.106824071127473,0.962479855263359,0.245040215981032,0.185803175125719,0.144269212976445,0.782560276832555,0.797131363644112,0,0.191505370132367,0.423347165447766,0,0,0,0.313359791546046,0,0.169291777801603,0.321176150207399,0,0.425846237690326,0,0.614481528616916,0.223676107892416,0,0,0,0,0,0.66614393599564,0,0,1.02555725490326,0.242721043499027,0.334330152832435,0,0.2387444847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| |||
|short_description=p4@USPL1 | |||
}} |
Revision as of 17:11, 11 January 2014
Short description: | p4@USPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_USPL1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 69bp_to_ENST00000255304_5end |
EntrezGene: | USPL1 |
HGNC: | 20294 |
UniProt: | Q5W0Q7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.57e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.57e-39 | 42 |
myeloid leukocyte | 9.86e-34 | 72 |
defensive cell | 3.52e-33 | 48 |
phagocyte | 3.52e-33 | 48 |
leukocyte | 1.13e-26 | 136 |
myeloid lineage restricted progenitor cell | 1.49e-25 | 66 |
granulocyte monocyte progenitor cell | 4.71e-25 | 67 |
monopoietic cell | 5.77e-25 | 59 |
monocyte | 5.77e-25 | 59 |
monoblast | 5.77e-25 | 59 |
promonocyte | 5.77e-25 | 59 |
macrophage dendritic cell progenitor | 6.57e-24 | 61 |
nongranular leukocyte | 1.58e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 2.00e-20 | 120 |
myeloid cell | 2.29e-19 | 108 |
common myeloid progenitor | 2.29e-19 | 108 |
hematopoietic stem cell | 2.48e-19 | 168 |
hematopoietic oligopotent progenitor cell | 2.16e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.16e-18 | 161 |
hematopoietic cell | 9.36e-18 | 177 |
neutrophil | 1.24e-09 | 3 |
granulocyte | 3.74e-09 | 8 |
eosinophil | 5.03e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.95e-25 | 98 |
blood island | 7.95e-25 | 98 |
hemolymphoid system | 5.08e-23 | 108 |
bone marrow | 3.72e-21 | 76 |
immune system | 3.43e-20 | 93 |
bone element | 4.90e-19 | 82 |
skeletal element | 1.18e-16 | 90 |
skeletal system | 3.16e-14 | 100 |
lateral plate mesoderm | 5.17e-10 | 203 |