FFCP PHASE1:Hg19::chr15:29211622..29211634,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=321 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=579 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=52bp_to_ENST00000558804_5end | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_9_at_APBA2_5end | |||
|id=chr15:29211622..29211634,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.68e-25!18;CL:0000789!5.68e-25!18;CL:0002420!5.68e-25!18;CL:0002419!5.68e-25!18;CL:0000790!5.68e-25!18;CL:0000084!1.03e-23!25;CL:0000827!1.03e-23!25;CL:0000625!1.42e-17!11;CL:0000838!2.10e-13!52;CL:0000542!5.07e-13!53;CL:0000051!5.07e-13!53;CL:0000624!1.73e-07!6;CL:0000037!2.22e-07!172;CL:0000566!2.22e-07!172;CL:0002087!3.49e-07!119;CL:0000623!4.46e-07!3;CL:0000825!4.46e-07!3;CL:0000842!8.36e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.29e-44;11!CL:0000791;6.10e-38;18!CL:0000789;6.10e-38;18!CL:0002419;6.10e-38;18!CL:0000084;3.22e-36;25!CL:0000623;3.82e-16;3!CL:0000226;2.68e-15;3!CL:0000842;2.68e-15;3!CL:0000542;3.25e-13;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,8.59e-45,11;CL:0000791,4.33e-38,18;CL:0000789,4.33e-38,18;CL:0002420,4.33e-38,18;CL:0002419,4.33e-38,18;CL:0000790,4.33e-38,18;CL:0000084,2.90e-36,25;CL:0000827,2.90e-36,25;CL:0000838,4.19e-24,52;CL:0000542,1.42e-23,53;CL:0000051,1.42e-23,53;CL:0000623,3.82e-16,3;CL:0000825,3.82e-16,3;CL:0000226,2.00e-15,3;CL:0000842,2.00e-15,3;CL:0002087,3.58e-14,115;CL:0000037,7.81e-13,168;CL:0000738,1.17e-12,136;CL:0000988,6.64e-12,177;CL:0002032,5.97e-10,161;CL:0000837,5.97e-10,161;CL:0002031,2.43e-09,120 | |||
|ontology_enrichment_development_v019=CL:0000790;6.10e-38;18!CL:0000051;3.25e-13;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.73e-17!15;UBERON:0000179!8.73e-17!15;UBERON:0000463!8.73e-17!15;UBERON:0007023!1.44e-15!115;UBERON:0004177!4.64e-08!7;UBERON:0002370!5.30e-07!4;UBERON:0005058!5.30e-07!4;UBERON:0009113!5.30e-07!4;UBERON:0003295!5.30e-07!4;UBERON:0005562!5.30e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.07e-37;15!UBERON:0000179;3.07e-37;15!UBERON:0000463;3.07e-37;15!UBERON:0002390;2.22e-15;32!UBERON:0002193;5.53e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.37e-37,15;UBERON:0000179,3.37e-37,15;UBERON:0000463,3.37e-37,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.98978217526377,0.619264493264304,0,0,0,0,0,0,0,1.40381113229099,0.651032612147555,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57367816091066,0.786021525498329,0.822405995998037,0,0,0,0,0.334231370655521,0.294605907474837,0,0,0,0,0.328875809207352,1.38175008892924,0,3.11401782640327,2.94294910898684,5.22677619024884,0,0.383220493601921,0.34362744548263,3.28925599625354,2.86708872891687,1.95325036156926,4.75226022224187,4.36667845325541,6.01537072425766,0,3.55165878066025,2.46338399076314,4.43534835094411,5.61624411145365,4.63438092424957,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12961773587702,5.31983052545203,3.66566877261179,3.20857590699371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,3.66714141391649,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02979043692868,1.52927441428475,2.84823593587081,4.04994018278241,2.05681136543097,0.648473311192717,1.08006287447623,1.58625035258854,0,0,0.735120647943095,0,0,0,0.159426272728822,1.59663497146253,0,0,0,0,0,0,0,0,0.321176150207399,0.403599414382095,0,0,0,0,0,4.68931428964897,0,0,0,0.66614393599564,0,0,0.146508179271894,0,1.33732061132974,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0.511572370226872,0.295930216910801,4.7896618469388,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,2.04386596391473,1.8837630767403,0,0,0,0,0,0.158936578980379,0,1.14262965711403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.391102765469606,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.320362237703084,0,0.828478110694391,1.48849806543585,0.197611631897944,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0.0657727735628491,0,0,0.313972371402056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0.62041277132864,0,0.111855431797792,0,0,0.647428837187895,0,0,0,0,0,0,0,0,1.20770274853339,0.463044948647668,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0.751871343838829,0.0644578879735772,0,0.178553938605658,0,0,0,0.458729283404541,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0.303114792872958,0.267964130156178,0,0,0,0,0.0645889098360061,0.248298857183432,0.112131862580613,0.0636471582781649,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0.0898252021065869,0,0,0,0,0.603821380773079,0 | |||
|short_description=p9@APBA2 | |||
}} |
Revision as of 22:33, 11 January 2014
Short description: | p9@APBA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_APBA2_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 52bp_to_ENST00000558804_5end |
EntrezGene: | APBA2 |
HGNC: | 579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 8.59e-45 | 11 |
mature alpha-beta T cell | 4.33e-38 | 18 |
alpha-beta T cell | 4.33e-38 | 18 |
immature T cell | 4.33e-38 | 18 |
mature T cell | 4.33e-38 | 18 |
immature alpha-beta T cell | 4.33e-38 | 18 |
T cell | 2.90e-36 | 25 |
pro-T cell | 2.90e-36 | 25 |
lymphoid lineage restricted progenitor cell | 4.19e-24 | 52 |
lymphocyte | 1.42e-23 | 53 |
common lymphoid progenitor | 1.42e-23 | 53 |
natural killer cell | 3.82e-16 | 3 |
pro-NK cell | 3.82e-16 | 3 |
single nucleate cell | 2.00e-15 | 3 |
mononuclear cell | 2.00e-15 | 3 |
nongranular leukocyte | 3.58e-14 | 115 |
hematopoietic stem cell | 7.81e-13 | 168 |
leukocyte | 1.17e-12 | 136 |
hematopoietic cell | 6.64e-12 | 177 |
hematopoietic oligopotent progenitor cell | 5.97e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.97e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 2.43e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 3.37e-37 | 15 |
haemolymphatic fluid | 3.37e-37 | 15 |
organism substance | 3.37e-37 | 15 |