FFCP PHASE1:Hg19::chr16:50667622..50667641,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_at_chr16:50667622..50667641,+ | |||
|id=chr16:50667622..50667641,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;2.63e-07;3!CL:0000182;6.16e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.47e-07,3;CL:0000182,5.64e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0001041;3.90e-15;30!UBERON:0006965;2.48e-10;2!UBERON:0004161;1.72e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.71e-19;1!DOID:1357;2.71e-19;1!DOID:1325;2.30e-11;7!DOID:3904;2.30e-11;7!DOID:0050615;7.84e-11;16!DOID:3910;2.48e-10;2!DOID:3905;4.80e-09;9 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,3.91e-19,1;DOID:1357,3.91e-19,1;DOID:1325,2.18e-11,7;DOID:3904,2.18e-11,7;DOID:0050615,8.11e-11,16;DOID:3910,2.27e-10,2;DOID:3905,4.61e-09,9 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.52e-18!115;UBERON:0001049!4.78e-15!57;UBERON:0005068!4.78e-15!57;UBERON:0006241!4.78e-15!57;UBERON:0007135!4.78e-15!57;UBERON:0002780!3.20e-12!41;UBERON:0001890!3.20e-12!41;UBERON:0006240!3.20e-12!41;UBERON:0001017!3.37e-12!82;UBERON:0003080!7.48e-12!42;UBERON:0005743!2.20e-11!86;UBERON:0002616!3.15e-11!59;UBERON:0003075!1.84e-10!86;UBERON:0007284!1.84e-10!86;UBERON:0000955!6.17e-10!69;UBERON:0006238!6.17e-10!69;UBERON:0000073!8.31e-10!94;UBERON:0001016!8.31e-10!94;UBERON:0002346!9.09e-10!90;UBERON:0000025!1.26e-09!194;UBERON:0004111!1.23e-08!241;UBERON:0001893!7.03e-08!34;UBERON:0003056!3.74e-07!61;UBERON:0001894!4.62e-07!7;UBERON:0006222!4.62e-07!7;UBERON:0000477!5.15e-07!286;UBERON:0001897!6.64e-07!2;UBERON:0002791!8.20e-07!33;UBERON:0000483!8.69e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;2.71e-19;1!UBERON:0001764;2.71e-19;1!UBERON:0001825;2.71e-19;1!UBERON:0006518;2.71e-19;1!UBERON:0008949;2.71e-19;1!UBERON:0000101;2.71e-19;1!UBERON:0002167;2.71e-19;1!UBERON:0001897;2.48e-10;2!UBERON:0001954;2.48e-10;2!UBERON:0004903;2.48e-10;2!UBERON:0003022;2.48e-10;2!UBERON:0002421;2.48e-10;2!UBERON:0010225;2.48e-10;2!UBERON:0002600;2.48e-10;2!UBERON:0002173;2.48e-10;2!UBERON:0002186;2.48e-10;2!UBERON:0002048;4.89e-08;22!UBERON:0000117;4.89e-08;22!UBERON:0000171;4.89e-08;22!UBERON:0000170;4.89e-08;22!UBERON:0004821;2.63e-07;3!UBERON:0007499;2.63e-07;3!UBERON:0003215;2.63e-07;3!UBERON:0010368;2.63e-07;3!UBERON:0009911;2.63e-07;3!UBERON:0002299;2.63e-07;3!UBERON:0006524;2.63e-07;3!UBERON:0008874;2.63e-07;3!UBERON:0002169;2.63e-07;3!UBERON:0004894;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,3.91e-19,1;UBERON:0001825,3.91e-19,1;UBERON:0002171,4.69e-19,1;UBERON:0006518,4.69e-19,1;UBERON:0008949,4.69e-19,1;UBERON:0000101,4.69e-19,1;UBERON:0002167,4.69e-19,1;UBERON:0001897,1.89e-10,2;UBERON:0010225,1.89e-10,2;UBERON:0001954,2.07e-10,2;UBERON:0003022,2.07e-10,2;UBERON:0002421,2.07e-10,2;UBERON:0002600,2.07e-10,2;UBERON:0004903,2.27e-10,2;UBERON:0002173,2.27e-10,2;UBERON:0002186,2.27e-10,2;UBERON:0002048,5.14e-08,22;UBERON:0000117,5.14e-08,22;UBERON:0000171,5.14e-08,22;UBERON:0000170,5.14e-08,22;UBERON:0005597,5.14e-08,22;UBERON:0000118,5.14e-08,22;UBERON:0004821,2.47e-07,3;UBERON:0003215,2.47e-07,3;UBERON:0010368,2.47e-07,3;UBERON:0009911,2.47e-07,3;UBERON:0002299,2.47e-07,3;UBERON:0006524,2.47e-07,3;UBERON:0008874,2.47e-07,3;UBERON:0002169,2.47e-07,3;UBERON:0004894,2.47e-07,3;UBERON:0007499,3.97e-07,25;UBERON:0000025,5.91e-07,192;UBERON:0009856,7.12e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0.307160702099232,0.994147647766298,0,0,0,0,1.39473591775749,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.552896299656123,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0.611030144933625,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0.787831823072237,1.81314888438566,1.28066733322951,0,0,1.59045937961861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0.314408610199332,1.24271716604159,0,0,0,0,0,0,0,0,1.25643277000187,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41023272848151,0.756215088665154,0,0.484426936895553,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.295712172434091,0.0675375846183947,0.781078098613847,0,0,0,0,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,11.340194184198,0,2.823652050974,0.109940516745429,0,0,0.218559560503957,0,0,0,0,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0.253397002022874,0,0,0.0918948995348449,0,0.227336094654718,0,1.65833887891756,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr16:50667622..50667641,+ | |||
}} |
Revision as of 03:31, 12 January 2014
Short description: | p@chr16:50667622..50667641, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50667622..50667641, + |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.47e-07 | 3 |
hepatocyte | 5.64e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 3.91e-19 | 1 |
paranasal sinus | 3.91e-19 | 1 |
lower lobe of right lung | 4.69e-19 | 1 |
right lung lobe | 4.69e-19 | 1 |
lower lobe of lung | 4.69e-19 | 1 |
lobe of lung | 4.69e-19 | 1 |
right lung | 4.69e-19 | 1 |
dorsal plus ventral thalamus | 1.89e-10 | 2 |
thalamic complex | 1.89e-10 | 2 |
Ammon's horn | 2.07e-10 | 2 |
lobe parts of cerebral cortex | 2.07e-10 | 2 |
hippocampal formation | 2.07e-10 | 2 |
limbic lobe | 2.07e-10 | 2 |
bronchoalveolar duct junction | 2.27e-10 | 2 |
alveolar duct | 2.27e-10 | 2 |
bronchiole | 2.27e-10 | 2 |
lung | 5.14e-08 | 22 |
respiratory tube | 5.14e-08 | 22 |
respiration organ | 5.14e-08 | 22 |
pair of lungs | 5.14e-08 | 22 |
lung primordium | 5.14e-08 | 22 |
lung bud | 5.14e-08 | 22 |
pulmonary alveolus epithelium | 2.47e-07 | 3 |
alveolus | 2.47e-07 | 3 |
pulmonary lobule | 2.47e-07 | 3 |
lobule | 2.47e-07 | 3 |
alveolus of lung | 2.47e-07 | 3 |
alveolar system | 2.47e-07 | 3 |
pulmonary acinus | 2.47e-07 | 3 |
alveolar sac | 2.47e-07 | 3 |
alveolar wall | 2.47e-07 | 3 |
epithelial sac | 3.97e-07 | 25 |
tube | 5.91e-07 | 192 |
sac | 7.12e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 3.91e-19 | 1 |
maxillary sinus cancer | 3.91e-19 | 1 |
bronchus cancer | 2.18e-11 | 7 |
bronchogenic carcinoma | 2.18e-11 | 7 |
respiratory system cancer | 8.11e-11 | 16 |
lung adenocarcinoma | 2.27e-10 | 2 |
lung carcinoma | 4.61e-09 | 9 |