FFCP PHASE1:Hg19::chr16:55462833..55462837,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr16:55462833..55462837,- | |||
|id=chr16:55462833..55462837,- | |||
|ontology_enrichment_celltype=CL:0002057!4.58e-82!42;CL:0000860!5.83e-76!45;CL:0002009!3.56e-69!65;CL:0002194!5.53e-68!63;CL:0000576!5.53e-68!63;CL:0000040!5.53e-68!63;CL:0000559!5.53e-68!63;CL:0000557!9.73e-66!71;CL:0000839!2.00e-63!70;CL:0000766!1.19e-57!76;CL:0000763!4.65e-40!112;CL:0000049!4.65e-40!112;CL:0002031!2.80e-33!124;CL:0002087!2.19e-31!119;CL:0000738!2.73e-28!140;CL:0002032!8.48e-24!165;CL:0000837!8.48e-24!165;CL:0000988!3.82e-23!182;CL:0000037!2.12e-22!172;CL:0000566!2.12e-22!172;CL:0000134!3.69e-07!358;CL:0002320!7.89e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.39e-96;33!CL:0002057;5.39e-96;33!CL:0000473;5.23e-80;39!CL:0000234;5.23e-80;39!CL:0000576;2.85e-44;48!CL:0000766;3.70e-31;69!CL:0000763;1.12e-14;100!CL:0002087;2.56e-12;104!CL:0000738;1.53e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.48e-92,48;CL:0000234,1.48e-92,48;CL:0000860,9.53e-90,42;CL:0002057,9.53e-90,42;CL:0002194,2.80e-73,59;CL:0000576,2.80e-73,59;CL:0000040,2.80e-73,59;CL:0000559,2.80e-73,59;CL:0002009,8.61e-71,61;CL:0000839,3.21e-65,66;CL:0000557,3.33e-64,67;CL:0000766,1.54e-59,72;CL:0000763,1.44e-38,108;CL:0000049,1.44e-38,108;CL:0002087,5.34e-36,115;CL:0002031,2.41e-34,120;CL:0000738,7.35e-30,136;CL:0002032,1.28e-24,161;CL:0000837,1.28e-24,161;CL:0000037,1.98e-23,168;CL:0000988,4.92e-22,177;CL:0000134,6.63e-09,354;CL:0002320,1.20e-08,361;CL:0000219,9.76e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;7.43e-64;42!CL:0000049;9.08e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.17e-57!80;UBERON:0001474!3.16e-55!86;UBERON:0002390!6.10e-50!102;UBERON:0003061!6.10e-50!102;UBERON:0002193!1.04e-46!112;UBERON:0004765!1.74e-45!101;UBERON:0001434!1.74e-45!101;UBERON:0002405!5.02e-43!115;UBERON:0002204!4.29e-26!167;UBERON:0003081!3.11e-21!216;UBERON:0000926!4.72e-10!448;UBERON:0004120!4.72e-10!448;UBERON:0006603!4.72e-10!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.78e-08;1!UBERON:0005208;1.78e-08;1!UBERON:0004145;1.78e-08;1!UBERON:0005946;1.78e-08;1!UBERON:0005965;1.78e-08;1!UBERON:0002078;1.78e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.04e-56,76;UBERON:0001474,6.80e-52,82;UBERON:0004765,5.51e-47,90;UBERON:0002405,2.33e-45,93;UBERON:0002390,7.23e-43,98;UBERON:0003061,7.23e-43,98;UBERON:0001434,6.12e-42,100;UBERON:0002193,1.44e-38,108;UBERON:0002204,1.36e-23,167;UBERON:0003081,1.69e-20,203;UBERON:0000926,1.05e-11,315;UBERON:0004120,1.05e-11,315;UBERON:0006603,1.05e-11,315;UBERON:0002134,1.42e-08,1;UBERON:0005208,1.42e-08,1;UBERON:0005946,1.42e-08,1;UBERON:0005965,1.42e-08,1;UBERON:0002078,1.42e-08,1;UBERON:0002384,2.70e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,1.20326668482085,0.651032612147555,0,0,0,0.145398238779565,3.02300754951048,1.21292030593908,2.09186133215116,6.98985409637104,5.26500830521676,0.28769239232215,5.63553554364021,0.709446689665756,4.82643953031266,5.16387746867061,2.70852973188684,0.752969358170419,3.0019676506363,1.12361742222542,8.57034898638527,4.49300637906531,8.31138263538754,0,0.598390972864896,0.426224750532694,8.9964863974861,9.64554881974938,8.09668923694247,1.25624332628372,3.65038042894141,0.65156653411535,4.23779651843358,4.05105399586321,4.1140110367315,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,1.00451418286425,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:55462833..55462837,- | |||
}} |
Revision as of 03:37, 12 January 2014
Short description: | p@chr16:55462833..55462837, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:55462833..55462837, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.48e-92 | 48 |
phagocyte | 1.48e-92 | 48 |
classical monocyte | 9.53e-90 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.53e-90 | 42 |
monopoietic cell | 2.80e-73 | 59 |
monocyte | 2.80e-73 | 59 |
monoblast | 2.80e-73 | 59 |
promonocyte | 2.80e-73 | 59 |
macrophage dendritic cell progenitor | 8.61e-71 | 61 |
myeloid lineage restricted progenitor cell | 3.21e-65 | 66 |
granulocyte monocyte progenitor cell | 3.33e-64 | 67 |
myeloid leukocyte | 1.54e-59 | 72 |
myeloid cell | 1.44e-38 | 108 |
common myeloid progenitor | 1.44e-38 | 108 |
nongranular leukocyte | 5.34e-36 | 115 |
hematopoietic lineage restricted progenitor cell | 2.41e-34 | 120 |
leukocyte | 7.35e-30 | 136 |
hematopoietic oligopotent progenitor cell | 1.28e-24 | 161 |
hematopoietic multipotent progenitor cell | 1.28e-24 | 161 |
hematopoietic stem cell | 1.98e-23 | 168 |
hematopoietic cell | 4.92e-22 | 177 |
mesenchymal cell | 6.63e-09 | 354 |
connective tissue cell | 1.20e-08 | 361 |
motile cell | 9.76e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.04e-56 | 76 |
bone element | 6.80e-52 | 82 |
skeletal element | 5.51e-47 | 90 |
immune system | 2.33e-45 | 93 |
hematopoietic system | 7.23e-43 | 98 |
blood island | 7.23e-43 | 98 |
skeletal system | 6.12e-42 | 100 |
hemolymphoid system | 1.44e-38 | 108 |
musculoskeletal system | 1.36e-23 | 167 |
lateral plate mesoderm | 1.69e-20 | 203 |
mesoderm | 1.05e-11 | 315 |
mesoderm-derived structure | 1.05e-11 | 315 |
presumptive mesoderm | 1.05e-11 | 315 |
tricuspid valve | 1.42e-08 | 1 |
right atrium valve | 1.42e-08 | 1 |
outflow tract of atrium | 1.42e-08 | 1 |
outflow part of right atrium | 1.42e-08 | 1 |
right cardiac atrium | 1.42e-08 | 1 |
connective tissue | 2.70e-08 | 371 |