FFCP PHASE1:Hg19::chr17:39968862..39968880,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10609 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16946 | |||
|TSSclassifier=strong | |||
|UniProt=Q92791 | |||
|association_with_transcript=-7bp_to_ENST00000355468,uc002hxu.2_5end | |||
|description=CAGE_peak_3_at_LEPREL4_5end | |||
|id=chr17:39968862..39968880,- | |||
|ontology_enrichment_celltype=CL:0000055!7.28e-29!180;CL:0000057!1.70e-14!75;CL:0002321!1.04e-12!248;CL:0000220!2.40e-12!246;CL:0000183!6.31e-12!59;CL:0000680!4.38e-11!57;CL:0000056!4.38e-11!57;CL:0000355!4.38e-11!57;CL:0000187!5.27e-11!54;CL:0000393!2.43e-10!60;CL:0000211!2.43e-10!60;CL:0000192!2.28e-09!42;CL:0000514!2.28e-09!42;CL:0000548!3.13e-08!679;CL:0000004!3.13e-08!679;CL:0000255!3.13e-08!679;CL:0000359!5.28e-08!32;CL:0000222!7.00e-08!119;CL:0000012!7.82e-08!682;CL:0002620!2.76e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.70e-08;23!CL:0000057;1.36e-07;73!CL:0000359;1.53e-07;32!CL:0000048;5.47e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.92e-12,76;CL:0000680,2.80e-09,58;CL:0000056,2.80e-09,58;CL:0000355,2.80e-09,58;CL:0000187,4.31e-09,55;CL:0000192,4.32e-09,43;CL:0000514,4.32e-09,43;CL:0000359,2.39e-08,32;CL:0000393,7.42e-08,61;CL:0000211,7.42e-08,61;CL:0002620,8.65e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!1.45e-14!238;UBERON:0009142!1.45e-14!238;UBERON:0000914!2.23e-13!83;UBERON:0002329!2.23e-13!83;UBERON:0003077!2.23e-13!83;UBERON:0003059!2.23e-13!83;UBERON:0007282!2.23e-13!83;UBERON:0009618!2.23e-13!83;UBERON:0007285!2.23e-13!83;UBERON:0004290!3.77e-13!70;UBERON:0002100!8.37e-13!216;UBERON:0005256!2.68e-12!143;UBERON:0000475!4.78e-12!365;UBERON:0000481!1.03e-11!347;UBERON:0000486!4.07e-11!82;UBERON:0001134!1.41e-10!61;UBERON:0002036!1.41e-10!61;UBERON:0003082!1.41e-10!61;UBERON:0000119!2.02e-10!312;UBERON:0000490!2.87e-10!138;UBERON:0002385!7.67e-10!63;UBERON:0001015!7.67e-10!63;UBERON:0000383!7.67e-10!63;UBERON:0000483!1.15e-09!309;UBERON:0001637!3.88e-09!42;UBERON:0003509!3.88e-09!42;UBERON:0004572!3.88e-09!42;UBERON:0002049!9.05e-09!79;UBERON:0007798!9.05e-09!79;UBERON:0003914!1.09e-08!118;UBERON:0004872!1.17e-08!84;UBERON:0000468!1.93e-08!659;UBERON:0000467!4.22e-07!625;UBERON:0001981!4.38e-07!60;UBERON:0007500!4.38e-07!60;UBERON:0004537!4.38e-07!60;UBERON:0006965!4.38e-07!60;UBERON:0000477!5.00e-07!286;UBERON:0002097!5.98e-07!40;UBERON:0002199!6.13e-07!45;UBERON:0002416!6.13e-07!45;UBERON:0000480!6.27e-07!626;UBERON:0004573!9.67e-07!33;UBERON:0004571!9.67e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.37e-07;9!UBERON:0001557;3.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.72e-12,73;UBERON:0007503,2.37e-12,78;UBERON:0002329,3.54e-12,71;UBERON:0003059,3.54e-12,71;UBERON:0007282,3.54e-12,71;UBERON:0004290,3.54e-12,71;UBERON:0009618,3.54e-12,71;UBERON:0003077,7.93e-12,72;UBERON:0007285,7.93e-12,72;UBERON:0003104,1.23e-11,160;UBERON:0009142,1.23e-11,160;UBERON:0005256,1.16e-10,122;UBERON:0001134,1.83e-09,62;UBERON:0002036,1.83e-09,62;UBERON:0003082,1.83e-09,62;UBERON:0000486,2.01e-09,83;UBERON:0002385,7.58e-09,64;UBERON:0001015,7.58e-09,64;UBERON:0000383,7.58e-09,64;UBERON:0000490,2.59e-08,148;UBERON:0001737,1.06e-07,9;UBERON:0002100,1.97e-07,199 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.845726424575827,0,0.446961094427288,2.61701557230111,0,0.631719873426831,0.522371256399677,1.22866968250754,2.09340350391728,0.873765488520689,1.31883489114227,0.495065411840187,1.32558950291166,1.34465029290355,1.20538905604795,1.46062018077475,0,1.47745269692145,1.22400414746552,1.88072832886853,1.14494394852423,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0.919421224478927,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.895037932904712,0.722878304769133,1.00267582127178,0.579386075843295,0,2.91980922181582,0.850813354476611,1.77383517970051,1.22968699970376,0.130979075497713,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0.79504962946682,0.860234595106124,0.694281003215189,1.13061588384802,0.419499436209906,0.825354125820202,0.835979866147242,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.732186172644509,0.735326160691737,0.81014194788176,0.267899184852239,0.898117490504679,0.112611480483322,0,0,0.916008719652036,0,0,0.872188104285069,2.48485975847659,2.02608818663328,0.926864265692532,2.58152958673932,2.12801029319014,1.68203280042692,2.1349799145941,1.72667283892012,0.622422070799533,0.67355336034844,1.14423332179421,3.63257826347835,3.45705554687999,0.234321431833797,0.936480230490962,1.1409436430889,0.298897361103602,1.05691048779388,1.45685649931318,1.40450806702248,1.22492502752936,0.61417158655884,0.516628905878827,1.18800285728205,0,0.910161361938026,0.718618141816238,2.18836948140286,0.500474079487857,1.10825646193673,0,0.612975591598039,1.05166641234618,2.1552114800404,2.33206526395521,1.06778694409284,1.69545520927649,2.40072876867522,1.13357782162283,1.54584324027377,1.48893485065272,1.35021065793013,0.389748020644795,1.26216887122057,1.47279837827679,1.13152239773168,2.13005755509969,0.906768884048762,1.01736355386293,0.57978255948989,0,0,0.731842236777572,1.45782745153634,0.464775771478074,1.34759371519982,0.756962552626885,0.72995471815166,3.12899064659632,1.92972281457866,2.76269842704961,0.464367928031979,0.721879481669586,1.18306800039844,1.01150814046861,1.92808823906786,1.54411561825352,1.52515610864684,1.42362371466658,2.56179485504312,1.96221465125346,2.69323009862473,0,1.40241773803446,0.8231480226628,2.94017422771084,0,0,0,0,1.35287282397425,0.343135620597051,0.439001141634502,0,0,0.925884451585296,0.977424915930974,1.03993478527958,0,0.811512834825538,1.40890433082986,0.144366447761074,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0.671928512795438,0.425325291727159,0.358234090811393,0.290633938513962,1.15014803749563,0,0.088048434013226,0,0,0,1.26995788584338,1.14596527667483,0,0,1.43958489784653,2.40274446275134,0.571652865261156,1.34557301214433,2.1798003441664,1.466765716419,0.904902010304444,3.57656445851882,0,1.86156681609409,0,0.771622122786426,1.41849132023278,1.3321108950805,1.00084595560703,2.17048642156577,4.11620168390384,0.977208552881205,1.06617584622764,1.58390374586686,0,0,0.499864955910285,0,0,0,0.958499421966331,0,0,1.01346914667305,1.02738161275192,0.179060963239896,0.112085143993527,0,0,0,1.52456774533478,0,0,0.670065061337395,0,0,0,0,0.736148950314839,0,0.813795071099207,1.03985430765404,0.535286966391485,0.315404830067869,0.937131319941706,0.601892199455438,0,1.03473071292505,0.664225598535437,2.21243002250044,0.781952530212746,6.06983588134496,4.11772108573027,0,0,0,1.81876542867756,0,1.20956117331872,0.744323423456331,1.99500565274481,1.12264037773229,0.768834895534206,0,1.93024705372329,2.96836132889982,1.23367755042124,1.24293207719189,0.821271560138091,0,1.39452454151951,1.93375119346596,0.601519410909855,1.28913384510255,1.03333003348146,0.728364672026868,0.393373244878272,0.902399225814824,0.385076685522074,0.784349769176855,1.46139224653261,1.16106791782163,0,0.680374821106063,1.29549549661284,0,1.62567862526312,0,0.509752546090077,0,0.447749509444357,0,0,0.512900250232778,0.328014645699706,0,0.206082023295445,0.640986253728404,0.577566499444116,1.14853107599234,0.650060246036521,1.6068392984416,0.870036464629098,0.462145851343933,1.38153307253517,1.65403886981437,0.751941714077915,1.0151168573996,0.852266274161009,2.93805717634233,0.165284915360978,0.192190067365106,1.02090169995667,0.4046311234222,0.464845549297286,1.88887408098384,2.0911118104818,0.308033580176089,1.59691809095107,0.869932992075073,1.29726953372744,1.14499909393593,3.34942532423701,0.949138274156178,0.571890581771475,0,0.855877976067841,0.636406495851874,1.56989728039846,1.07923474549989,1.37268514868027,1.64937363283961,1.41527737101321,1.58510321173008,0.421258456238981,2.43816869544795,1.46228093778771,0,0.9554993798559,1.41405431953713,1.13008116620243,1.10273068709225,1.32687795048244,0.876901770507525,1.15755106853338,0.655894752046633,2.02910376962704,1.54911749049875,1.97186921772569,1.57752487424457,1.27723753317057,1.426684205925,0.354761064070598,0.211107635297664,0.987884678879706,1.89736586882858,0.349934720244983,0.577332676353072,0,1.08890984861323,0.188287601553558,0.86101074534246,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,1.1750647824022,5.77487913158015,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0.677167111206413,0,0,0.851692475380653,0,0.307240764308458,0.223676107892416,0,0,0.278406173895242,0,0.540911356951966,0.33307196799782,1.4098700508785,0.18714054040822,0,2.91265252198832,0,1.70481688083848,1.67121139316383,1.48482340416319,1.53580351049616,0,0.422008249231538,1.22439575525196,0,1.26675244876796,0.398495976502139,0.276283915531148,0.503865495708552,1.1249555075237,0.123084805461069,0.622079175323615,0.539210106883961,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0.349839999984783,2.89999830173917,0.796554137998498,0,1.18193840883968,0.344743373241465,0,0.347249989866585,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0,2.39664619741778,0,0.307801034015188,0.683652335082007,0.69169171316418,0.359030577639089,0,0.638002319463839,1.55715908783166,0,0,0.156980256395025,0.498635045700469,0,0,0,0,0,0.843992258112108,0,0.424059214301822,2.59666367690509,0,0,0,0.593042257361244,0.123563938946503,0.104421949505455,0.067401132980677,1.60515529459758,0,0,0.19566461893209,0.485560759068186,0.789168805698781,1.20990716048664,0.30607276163049,0,0.300646838828985,1.24425829676697,0.664653872707185,0,0.627865836814451,1.19472429772959,1.42304773014896,0.554698692052555,0.347119476670262,0,0.522355239482415,0.17472666824203,1.20390222730132,0.870806981601766,1.24251839046515,1.06750094169172,0,1.76512253383001,0.677942222341597,1.64450309576101,0.19871461170299,0.0633107959558787,0,1.68333522528221,0.213452994739353,1.19885765749278,0,1.94712213482057,0.171594997861965,0.288109595976299,0.372757606696298,0.942776138467182,1.22313785466253,1.255234155748,0.917983958726896,0.866851769704557,0,0,0,0.429765441419957,0,0.558564802544508,0.229160424011684,0,0,0,0.223171457441873,0.403100834920358,1.08089965062721,0,1.49688046383725,1.56590130924216,1.55028150864625,0.0984274815147488,0,0.795229689809303,0.136203406111576,1.12527203925513,0.962776056180637,0.83088067605837,0,0,0.182248669974074,0,0.0788057072991982,0.944182586429966,1.16160370171347,1.25501137532991,0.383830394638891,0,0,1.77987976358325,0.542999601753713,0.864221491201268,1.30634944043764,3.59190574687462,0.656740165994712,0.851940108927109,0.906496732161005,0.146552233678082,0,0,0.13223260174269,1.36869470307464,0.704815022316672,0.106787412567695,0.314408610199332,0.414239055347196,0.992332043623902,0,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.122026264901963,0.3755727921195,0,0,0.0620964029413835,1.66018361923477,1.12482367165896,0.303298235083296,1.14186133417987,2.82318983637806,0.936669811613763,0.434763085832475,1.79105763464249,2.57084640831947,1.10961172300523,0.568209015825267,1.76097531226803,1.77962244319307,0.915360273587694,1.36107831386915,1.70980920641059,1.03498604992744,0.796483835818512,0.449803112163605,1.24210365501008,1.24411862352257,0.797525143673985,1.5652351854352,2.55437935295271,0.380805212168795,1.22061219961398,2.00033525122815,0.644463342254931,2.78420255927096,0.398095888698616,0.800055529326307,0.686791410365586,1.34699795506368,1.26184898228651,0.57785949122191,0.214441591374926,0,1.13352962756136,0.463044948647668,0.489473409012935,1.61179956973339,1.54400723580486,0.657852148736121,0.530067437837643,0.192914038270915,1.8583668471838,0.256241518587947,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0.245772908753719,0,0,0.213383459388282,0,0.567515953566836,1.28874165176289,0.279759015438889,0,0.511577485214607,2.04867141653695,0.943595651135378,0.873677105536111,0,0.212574920101683,1.23935764259002,0,0,0.315446980005013,0,2.82140754952547,0.6124909547064,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.414943514785307,0.322951291263702,0,0.785181748008205,1.06172751012966,0,0.231051332300676,1.52552838186867,0.690359926060101,0.994581110581374,0.526472298444801,1.81534561833168,0.781514011233092,0,0.327543835020193,1.18284868973636,0.0675375846183947,0,0.413373593002368,0.253663240775627,0,0.548257766857182,0,0.175871244359621,0.255524855279191,0,0,0,0.227662191351298,0.266107110487916,0,0.685952037749674,0,0.131545547125698,0.236387681767936,0.333694205676207,0.156986185701028,0,0,1.82631744101899,0.647782773655864,7.16627531830575,0.214429632529969,0,2.20858708199438,0.695433089210318,0.801711364730253,0.414432328326074,0.17071847709395,0,0,0,0.340853619036631,0,0.22910686854405,0,0,0,0.490751168076215,0,0,0,1.1598144313382,1.45713297917742,0.467878926924211,0.994753875806841,0.83244063544298,0.67767649223376,0.329821550236287,1.05673990496671,0,0.218559560503957,0.470317296361523,0.245148321753905,0.471353094203252,0.196308467114945,0,2.9585900930838,1.86919826156599,0,0.580120991762195,0,0,0.352894871715692,0,1.46067277649303,0,0.143339583151451,2.68211655728414,0.135982980381829,0.872701380680755,0,1.48798007266701,0.462175628631418,0.865253124247578,0.126166424835079,0.218531143927391,1.39368351112581,0.203977659483963,0.26721740526556,0.0918948995348449,0,0.0757786982182394,0,0,0.103432995861895,0.426467963801962,0.476128862927481,0,0.0620747142958579,0.448527450322454,0.25458863311266,0.606351566874658,0,0.684466602170562,0,0.215166616178029,0,0.244209805832924,0.320182037633146,1.9307228228694,0.359300808426348,0,0.244482888365733,0.406896178315738,0.665756774185513,0.201273793591026,0 | |||
|short_description=p3@LEPREL4 | |||
}} |
Revision as of 15:22, 20 January 2014
Short description: | p3@LEPREL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LEPREL4_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000355468, uc002hxu.2_5end |
EntrezGene: | LEPREL4 |
HGNC: | 16946 |
UniProt: | Q92791 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.92e-12 | 76 |
muscle precursor cell | 2.80e-09 | 58 |
myoblast | 2.80e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.80e-09 | 58 |
muscle cell | 4.31e-09 | 55 |
smooth muscle cell | 4.32e-09 | 43 |
smooth muscle myoblast | 4.32e-09 | 43 |
vascular associated smooth muscle cell | 2.39e-08 | 32 |
electrically responsive cell | 7.42e-08 | 61 |
electrically active cell | 7.42e-08 | 61 |
skin fibroblast | 8.65e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.72e-12 | 73 |
epithelial vesicle | 2.37e-12 | 78 |
somite | 3.54e-12 | 71 |
presomitic mesoderm | 3.54e-12 | 71 |
presumptive segmental plate | 3.54e-12 | 71 |
dermomyotome | 3.54e-12 | 71 |
trunk paraxial mesoderm | 3.54e-12 | 71 |
paraxial mesoderm | 7.93e-12 | 72 |
presumptive paraxial mesoderm | 7.93e-12 | 72 |
mesenchyme | 1.23e-11 | 160 |
entire embryonic mesenchyme | 1.23e-11 | 160 |
trunk mesenchyme | 1.16e-10 | 122 |
skeletal muscle tissue | 1.83e-09 | 62 |
striated muscle tissue | 1.83e-09 | 62 |
myotome | 1.83e-09 | 62 |
multilaminar epithelium | 2.01e-09 | 83 |
muscle tissue | 7.58e-09 | 64 |
musculature | 7.58e-09 | 64 |
musculature of body | 7.58e-09 | 64 |
unilaminar epithelium | 2.59e-08 | 148 |
larynx | 1.06e-07 | 9 |
trunk | 1.97e-07 | 199 |