FFCP PHASE1:Hg19::chr17:44091602..44091622,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1015 | |||
|description=CAGE_peak_at_chr17:44091602..44091622,+ | |||
|id=chr17:44091602..44091622,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;3.50e-08;10 | |||
|ontology_enrichment_disease=DOID:171!3.77e-12!10 | |||
|ontology_enrichment_disease_v019=DOID:171;8.28e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,8.96e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.35e-47!57;UBERON:0005068!2.35e-47!57;UBERON:0006241!2.35e-47!57;UBERON:0007135!2.35e-47!57;UBERON:0001017!5.36e-45!82;UBERON:0000073!8.71e-44!94;UBERON:0001016!8.71e-44!94;UBERON:0005743!2.19e-42!86;UBERON:0002346!3.24e-40!90;UBERON:0002616!7.60e-40!59;UBERON:0000955!2.39e-39!69;UBERON:0006238!2.39e-39!69;UBERON:0002780!2.07e-37!41;UBERON:0001890!2.07e-37!41;UBERON:0006240!2.07e-37!41;UBERON:0002020!2.31e-36!34;UBERON:0003528!2.31e-36!34;UBERON:0003080!2.37e-36!42;UBERON:0001869!2.39e-35!32;UBERON:0003075!1.49e-33!86;UBERON:0007284!1.49e-33!86;UBERON:0007023!1.79e-33!115;UBERON:0001893!6.19e-33!34;UBERON:0002619!1.45e-32!22;UBERON:0000924!1.79e-32!173;UBERON:0006601!1.79e-32!173;UBERON:0002791!3.57e-31!33;UBERON:0000956!3.37e-28!25;UBERON:0000203!3.37e-28!25;UBERON:0001950!5.65e-28!20;UBERON:0004121!1.71e-27!169;UBERON:0003056!8.97e-23!61;UBERON:0000033!1.35e-21!123;UBERON:0000153!4.21e-20!129;UBERON:0007811!4.21e-20!129;UBERON:0003076!7.94e-12!15;UBERON:0003057!7.94e-12!15;UBERON:0000025!1.86e-11!194;UBERON:0000200!6.50e-11!6;UBERON:0004111!2.28e-10!241;UBERON:0002308!1.54e-09!9;UBERON:0000125!1.54e-09!9;UBERON:0000475!2.71e-09!365;UBERON:0004733!4.04e-09!12;UBERON:0002028!4.04e-09!12;UBERON:0007277!4.04e-09!12;UBERON:0002021!1.02e-08!5;UBERON:0000349!1.43e-08!5;UBERON:0001872!1.81e-08!5;UBERON:0004732!2.47e-08!13;UBERON:0001871!3.64e-08!7;UBERON:0000988!4.61e-08!3;UBERON:0000483!9.69e-08!309;UBERON:0000477!1.36e-07!286;UBERON:0000119!1.48e-07!312;UBERON:0002298!2.22e-07!8;UBERON:0002420!9.18e-07!9;UBERON:0007245!9.18e-07!9;UBERON:0010009!9.18e-07!9;UBERON:0010011!9.18e-07!9;UBERON:0000454!9.18e-07!9;UBERON:0002680!9.54e-07!9;UBERON:0001895!9.54e-07!9;UBERON:0010092!9.54e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.56e-20;4!UBERON:0000923;1.56e-20;4!UBERON:0010316;1.56e-20;4!UBERON:0005291;1.56e-20;4!UBERON:0000922;3.17e-17;49!UBERON:0002050;1.21e-16;5!UBERON:0005423;1.21e-16;5!UBERON:0001950;1.56e-15;20!UBERON:0002619;3.21e-14;22!UBERON:0000956;1.26e-12;25!UBERON:0000203;1.26e-12;25!UBERON:0001871;1.89e-12;6!UBERON:0002771;1.82e-11;2!UBERON:0000955;1.97e-09;68!UBERON:0002791;2.30e-09;32!UBERON:0001869;3.09e-09;32!UBERON:0003528;6.37e-09;34!UBERON:0002020;6.37e-09;34!UBERON:0001893;2.34e-08;34!UBERON:0002114;5.93e-08;2!UBERON:0001017;1.28e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.58e-15,20;UBERON:0002619,3.26e-14,22;UBERON:0000956,1.28e-12,25;UBERON:0000203,1.28e-12,25;UBERON:0001871,1.89e-12,6;UBERON:0001017,1.55e-11,81;UBERON:0002771,1.82e-11,2;UBERON:0001016,2.21e-10,89;UBERON:0000955,3.62e-10,68;UBERON:0006238,3.62e-10,68;UBERON:0002791,5.10e-10,32;UBERON:0001869,5.10e-10,32;UBERON:0003528,1.82e-09,34;UBERON:0002020,1.82e-09,34;UBERON:0001893,1.82e-09,34;UBERON:0004121,8.59e-09,171;UBERON:0000924,8.59e-09,171;UBERON:0006601,8.59e-09,171;UBERON:0002346,4.26e-08,86;UBERON:0002114,5.54e-08,2;UBERON:0002780,6.13e-08,41;UBERON:0001890,6.13e-08,41;UBERON:0003080,6.13e-08,41;UBERON:0006240,6.13e-08,41 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502548796003046,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0.371072392647405,3.99227596002388,0.260427761085233,0,0,0,0,0,0,0.291604613383254,0.347249989866585,0,0.482385754501632,0,0.221158519862449,0.886642856860642,0.219385397153973,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,2.14250933141343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.953423842781029,0,0,0.415440338029185,0,0,0.607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,4.6369980662746,0.876336514945499,0,0.554645257684261,0.0620964029413835,0,0,0,0.285465333544967,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0.255788742607303,0,0.786329709279482,0,0.509197589862076,0.637724760305049,1.48722917110803,0.558644917973244,0,0,0,0,0,0.192687675289379,0,0.638535436228605,0.615349092722265,2.01657356977374,0.276629009856872,0.484426936895553,0,0.0981477185010256,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.202612753855184,0,0.826747186004736,0.19024743058172,1.64092442705466,0,0,1.05522746615772,0,0.535701835878287,0,0,0,0,0,0,0.203909198930495,0.394636641377094,0.118193840883968,0,0,0.628462359664008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0.237840181555137,0,0.109940516745429,0.150962843566674,0,0,0,0.245148321753905,0,0.392616934229891,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,2.61810414204226,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0.829169439458779,0.413731983447581,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0.0898252021065869,0,0,0.406896178315738,0,0.603821380773079,0 | |||
|short_description=p@chr17:44091602..44091622,+ | |||
}} |
Revision as of 15:52, 20 January 2014
Short description: | p@chr17:44091602..44091622, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:44091602..44091622, + |
Coexpression cluster: | C1015_occipital_neuroectodermal_temporal_parietal_duodenum_brain_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 1.58e-15 | 20 |
regional part of cerebral cortex | 3.26e-14 | 22 |
cerebral cortex | 1.28e-12 | 25 |
pallium | 1.28e-12 | 25 |
temporal lobe | 1.89e-12 | 6 |
central nervous system | 1.55e-11 | 81 |
middle temporal gyrus | 1.82e-11 | 2 |
nervous system | 2.21e-10 | 89 |
brain | 3.62e-10 | 68 |
future brain | 3.62e-10 | 68 |
regional part of telencephalon | 5.10e-10 | 32 |
cerebral hemisphere | 5.10e-10 | 32 |
brain grey matter | 1.82e-09 | 34 |
gray matter | 1.82e-09 | 34 |
telencephalon | 1.82e-09 | 34 |
ectoderm-derived structure | 8.59e-09 | 171 |
ectoderm | 8.59e-09 | 171 |
presumptive ectoderm | 8.59e-09 | 171 |
neurectoderm | 4.26e-08 | 86 |
duodenum | 5.54e-08 | 2 |
regional part of forebrain | 6.13e-08 | 41 |
forebrain | 6.13e-08 | 41 |
anterior neural tube | 6.13e-08 | 41 |
future forebrain | 6.13e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.96e-09 | 10 |