FFCP PHASE1:Hg19::chr18:21594585..21594610,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125488 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26595 | |||
|TSSclassifier=weak | |||
|UniProt=Q8N584 | |||
|association_with_transcript=201bp_to_ENST00000317571,NM_001135993,NM_001243425,uc002kuv.2,uc002kuw.2_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_5_at_TTC39C_5end | |||
|id=chr18:21594585..21594610,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.92e-13!18;CL:0000789!3.92e-13!18;CL:0002420!3.92e-13!18;CL:0002419!3.92e-13!18;CL:0000790!3.92e-13!18;CL:0000542!2.44e-12!53;CL:0000051!2.44e-12!53;CL:0000838!3.14e-12!52;CL:0002087!1.23e-09!119;CL:0000084!1.11e-08!25;CL:0000827!1.11e-08!25;CL:0000625!1.71e-08!11;CL:0000738!2.27e-07!140;CL:0002031!9.66e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.33e-22;18!CL:0000789;1.33e-22;18!CL:0002419;1.33e-22;18!CL:0000084;3.74e-16;25!CL:0000625;3.89e-14;11!CL:0000542;7.27e-12;53!CL:0000624;6.32e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.46e-22,18;CL:0000789,1.46e-22,18;CL:0002420,1.46e-22,18;CL:0002419,1.46e-22,18;CL:0000790,1.46e-22,18;CL:0000838,3.32e-20,52;CL:0000542,1.40e-19,53;CL:0000051,1.40e-19,53;CL:0000084,4.15e-16,25;CL:0000827,4.15e-16,25;CL:0000625,3.89e-14,11;CL:0002087,2.21e-10,115;CL:0000738,4.49e-10,136;CL:0000037,5.51e-10,168;CL:0000624,7.13e-09,6;CL:0000988,1.25e-08,177;CL:0002031,5.94e-08,120;CL:0002032,3.79e-07,161;CL:0000837,3.79e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.33e-22;18!CL:0000051;7.27e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.92e-07;15!UBERON:0000179;2.92e-07;15!UBERON:0000463;2.92e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.95e-07,15;UBERON:0000179,1.95e-07,15;UBERON:0000463,1.95e-07,15 | |||
|phase1_expression=0,1.2846031433459,0.563817616383885,0,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0.218441372130172,0,0.247532705920093,0.994192127183747,0.672325146451775,0,0,0,0.369363174230364,0.204000691244253,0.313454721478088,0,0.684372125364421,0.376627918784408,0.534893840235659,0.164201178899891,0.393553906568396,0.786728553697808,1.15148819429164,2.01260960310899,0,0.90361775633475,1.10926203050036,1.85921281392724,0.284338464974843,1.46800219667424,1.66198622559563,1.60435557976113,2.38711957787437,0.671746422719773,0.647787332037959,0.77272670290256,0.436194716338694,0.377875943688809,0.242584061187816,1.16214518452842,0.822335776043652,0.309706370895104,0.28769239232215,1.2808035326455,0.236482229888585,0.689491361473237,0.645484683583826,0,0.564727018627814,0,0,0.918251677112708,0.962787081228281,0,0.659702600373432,1.99463657621632,0.852449501065388,0.580418477257168,1.70215567407342,1.24564449799115,0.502497330513487,0,0.868755378820466,0,1.10483290796269,0,0,0.425208599930087,0,0.112328631146495,0.750884464207532,0.16072558669708,0,0.19891667719909,0,0,1.09227722252426,1.77901850772711,1.28019066769952,0.400395987036012,0.574752439954483,0.661044872784862,0,3.98449078376614,5.87237189370939,4.58727873750275,2.64342657158052,1.12101712596307,1.31692042387539,9.04864942523632,7.8602152549833,13.5696989339676,3.34372990781356,5.21475626613745,9.9424039204294,5.84480185223734,1.11410456885174,11.7842362989935,14.3997031479354,12.1861738694257,2.17755243533648,1.69077151827842,4.1109476150919,2.76350017785848,1.73881851441031,3.85545064221357,6.1534390460634,5.22677619024884,2.94604291013672,6.51474839123266,6.8725489096526,4.04831507231205,7.00843911513013,4.55758417699493,2.85135613334512,4.51725357233318,4.99147783502232,8.74515085866421,4.2619905367923,3.28451198768419,8.0642697289893,8.82552646085574,8.25499102131954,0,0,0.255725123687061,0,0,0.434539556882471,0,0,0.378139268656271,0.443458794925128,0.43917392846563,3.66741411393595,0.364295288292542,1.11235332835329,0,0.522389211897802,0.132957960518865,2.8618874916641,2.28797964312051,2.60020250930695,0,0.860234595106124,0,0,0,0,0.417989933073621,0,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0.337834441449967,0,0,0.183201743930407,0,0,0.872188104285069,0.496971951695318,0.25326102332916,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0,0.538842688278752,0.653847612453835,0,0,0.70296429550139,0.312160076830321,0.570471821544449,0,0.352303495931295,1.45685649931318,0.561803226808994,0.204154171254893,0.368502951935304,0.619954687054593,0,1.23633464639278,0,0,0.673344455816265,0.125118519871964,0.277064115484183,0.438977620880838,0.612975591598039,1.50238058906597,0,0.717558542755448,0.85422955527427,0.211931901159562,0.300091096084402,0.309157587715317,0.257640540045629,0.37223371266318,0.337552664482532,0.194874010322397,0.252433774244115,0.184099797284599,0.646584227275248,0,0.302256294682921,0,0.386521706326594,0.818238361772504,0.573609190778008,0.121973706129595,0.132529768321485,0.348581828608555,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,1.53798840051797,1.01150814046861,1.44606617930089,1.32352767278873,1.96091499683166,0.949082476444386,1.48314438976181,1.56977172100277,0.38474715694639,0,0,0,0,1.26755034821831,0.982827216677626,0,2.20731549707325,0.122988438543114,0.343135620597051,0.439001141634502,0,0.804231779293047,0.277765335475589,0,2.07986957055916,1.44331342025273,0.463721619900307,0.587043471179108,0,0,0,2.37061319387782,0.858486162094873,0.246217006087397,0.468008530278475,0.594524649154913,1.87467667973554,0.503946384596579,0.708875486211932,0.268675568108545,0,1.15014803749563,0,0.088048434013226,0.414656231081544,0.144119953416961,0,0,0.381988425558278,0,0,0.205654985406647,0,0,0.336393253036082,0.43596006883328,0.07333828582095,0.258543431515556,3.57656445851882,0,0.797814349754612,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.399891964728228,0,0.502257091432126,0,0.479249710983165,0,0,0,0.410952645100767,0.179060963239896,5.94051263165695,4.92576900504818,7.11570997036407,5.39040752374943,0.508189248444927,1.30139853857622,0.773288812777695,1.17261385734044,1.27587750330633,0,0,0,0.736148950314839,0.500170521059677,0.542530047399471,3.32753378449291,1.60586089917446,1.26161932027148,2.10854546986884,0.300946099727719,0,2.0694614258501,0,0.368738337083406,0.260650843404249,0,0,5.37596867919507,2.5885704098234,4.69601254335155,0.303127571446259,0,0.907170879989041,0.496215615637554,0.306923946576125,0.561320188866147,0.384417447767103,0.511707249066704,0.482561763430822,0,0,0.355123450626254,0.410635780069046,0,0,0.362578348774867,0.40101294060657,0.276242966807689,0.34444334449382,0.182091168006717,0.786746489756545,0.902399225814824,0.462092022626489,0,0,0.422206515571503,1.13733384070897,0,0.431831832204279,0,0.270946437543853,0,1.01950509218015,0.83107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| |||
|short_description=p5@TTC39C | |||
}} |
Revision as of 18:48, 20 January 2014
Short description: | p5@TTC39C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TTC39C_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 201bp_to_ENST00000317571, NM_001135993, NM_001243425, uc002kuv.2, uc002kuw.2_5end |
EntrezGene: | TTC39C |
HGNC: | 26595 |
UniProt: | Q8N584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.46e-22 | 18 |
alpha-beta T cell | 1.46e-22 | 18 |
immature T cell | 1.46e-22 | 18 |
mature T cell | 1.46e-22 | 18 |
immature alpha-beta T cell | 1.46e-22 | 18 |
lymphoid lineage restricted progenitor cell | 3.32e-20 | 52 |
lymphocyte | 1.40e-19 | 53 |
common lymphoid progenitor | 1.40e-19 | 53 |
T cell | 4.15e-16 | 25 |
pro-T cell | 4.15e-16 | 25 |
CD8-positive, alpha-beta T cell | 3.89e-14 | 11 |
nongranular leukocyte | 2.21e-10 | 115 |
leukocyte | 4.49e-10 | 136 |
hematopoietic stem cell | 5.51e-10 | 168 |
CD4-positive, alpha-beta T cell | 7.13e-09 | 6 |
hematopoietic cell | 1.25e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 5.94e-08 | 120 |
hematopoietic oligopotent progenitor cell | 3.79e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.79e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 1.95e-07 | 15 |
haemolymphatic fluid | 1.95e-07 | 15 |
organism substance | 1.95e-07 | 15 |