FFCP PHASE1:Hg19::chr19:1360950..1360985,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:1360950..1360985,+ | |||
|id=chr19:1360950..1360985,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.58e-29!180;CL:0000133!8.67e-13!59;CL:0000057!1.35e-12!75;CL:0000333!6.22e-11!41;CL:0000221!1.39e-09!71;CL:0000243!2.34e-08!15;CL:0000125!2.34e-08!15;CL:0000030!2.34e-08!15;CL:0000339!2.34e-08!15;CL:0000325!2.53e-07!39;CL:0000710!2.95e-07!20;CL:0000183!8.25e-07!59;CL:0000095!9.72e-07!17;CL:0000123!9.72e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000147;9.05e-12;14!CL:0000243;4.51e-11;15!CL:0000125;4.51e-11;15!CL:0000095;1.40e-09;17!CL:0000075;2.22e-09;27!CL:0000148;8.38e-09;10!CL:0000710;1.35e-08;20!CL:0002319;2.28e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,2.85e-14,59;CL:0000333,1.13e-13,41;CL:0000147,6.35e-12,14;CL:0000221,2.30e-11,72;CL:0000243,2.53e-11,15;CL:0000125,2.53e-11,15;CL:0000030,2.53e-11,15;CL:0000339,2.53e-11,15;CL:0000095,8.42e-10,17;CL:0000123,8.42e-10,17;CL:0000075,1.59e-09,27;CL:0000710,7.23e-09,20;CL:0000148,9.27e-09,10;CL:0000541,9.27e-09,10;CL:0002319,1.50e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000339;4.51e-11;15!CL:0000133;9.14e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.04e-12!94;UBERON:0001016!1.04e-12!94;UBERON:0003075!1.89e-11!86;UBERON:0007284!1.89e-11!86;UBERON:0002346!3.83e-11!90;UBERON:0005743!4.27e-11!86;UBERON:0004121!1.34e-09!169;UBERON:0000924!1.63e-09!173;UBERON:0006601!1.63e-09!173;UBERON:0001017!1.68e-09!82;UBERON:0000033!2.59e-09!123;UBERON:0000153!5.47e-09!129;UBERON:0007811!5.47e-09!129;UBERON:0000955!1.75e-08!69;UBERON:0006238!1.75e-08!69;UBERON:0000475!3.32e-08!365;UBERON:0003056!3.70e-08!61;UBERON:0002616!5.99e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000019;3.89e-10;19!UBERON:0000047;3.89e-10;19!UBERON:0004088;3.89e-10;19!UBERON:0010230;3.89e-10;19!UBERON:0000970;1.80e-09;20!UBERON:0002104;7.16e-09;21!UBERON:0001456;7.16e-09;21!UBERON:0007625;2.47e-08;11!UBERON:0011135;3.71e-08;5!UBERON:0002216;3.71e-08;5!UBERON:0011134;3.71e-08;5!UBERON:0002209;3.71e-08;5!UBERON:0002213;3.71e-08;5!UBERON:0007844;3.71e-08;5!UBERON:0011138;3.71e-08;5!UBERON:0001130;3.71e-08;5!UBERON:0001066;3.71e-08;5!UBERON:0001468;3.71e-08;5!UBERON:0000020;7.80e-08;23!UBERON:0001801;9.32e-08;14!UBERON:0001032;2.20e-07;24!UBERON:0004456;2.20e-07;24!UBERON:0004905;9.72e-07;8!UBERON:0000982;9.72e-07;8!UBERON:0004770;9.72e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,8.63e-10,171;UBERON:0000924,8.63e-10,171;UBERON:0006601,8.63e-10,171;UBERON:0002346,1.48e-09,86;UBERON:0003075,1.72e-09,82;UBERON:0007284,1.72e-09,82;UBERON:0000019,1.84e-09,20;UBERON:0000047,1.84e-09,20;UBERON:0010312,1.84e-09,20;UBERON:0004088,1.84e-09,20;UBERON:0010230,1.84e-09,20;UBERON:0003072,1.84e-09,20;UBERON:0004128,1.84e-09,20;UBERON:0003071,1.84e-09,20;UBERON:0000970,7.28e-09,21;UBERON:0002104,7.28e-09,21;UBERON:0007625,1.38e-08,11;UBERON:0011135,2.32e-08,5;UBERON:0002216,2.32e-08,5;UBERON:0011134,2.32e-08,5;UBERON:0002209,2.32e-08,5;UBERON:0002213,2.32e-08,5;UBERON:0005856,2.32e-08,5;UBERON:0005866,2.32e-08,5;UBERON:0005863,2.32e-08,5;UBERON:0007844,2.32e-08,5;UBERON:0011138,2.32e-08,5;UBERON:0001130,2.32e-08,5;UBERON:0001066,2.32e-08,5;UBERON:0001468,2.32e-08,5;UBERON:0001456,2.54e-08,22;UBERON:0001801,9.43e-08,14;UBERON:0001016,1.71e-07,89;UBERON:0000020,2.23e-07,24;UBERON:0001032,2.23e-07,24;UBERON:0004456,2.23e-07,24;UBERON:0010371,4.01e-07,104;UBERON:0003056,4.49e-07,61;UBERON:0001017,7.94e-07,81 | |||
|phase1_expression=0.54503513781167,0.642301571672949,1.12763523276777,1.0007329835313,0.446961094427288,1.74467704820074,0,0.631719873426831,0.261185628199839,0.982935746006035,0,0,0,1.8564952944007,1.32558950291166,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,2.58554221961255,3.4680117511523,2.5076377718247,0.85870796139317,1.23186982565596,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0.12786256184353,2.1686349143074,1.00267582127178,0.434539556882471,0,0,1.41802225746102,1.55210578223795,0.702678285545008,0.589405839739707,0.364295288292542,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0.993943903390637,0.886413581652058,0.132409180813219,1.43418310374407,0.709336764396714,0.560677600142307,0,0.49333509683432,0.622422070799533,0.538842688278752,0.326923806226917,0.151357427644931,1.15235184896,0.937285727335186,0.312160076830321,0.570471821544449,0.298897361103602,0.23486899728753,0.323745888736263,0,0.61246251376468,0,1.23990937410919,0,1.48360157567134,0,2.15585442544872,0,0.125118519871964,0,0.877955241761676,1.22595118319608,1.80285670687916,0.113432183160021,1.61450672119976,0.85422955527427,0.423863802319124,0.600182192168805,0.721367704669072,1.03056216018252,0.37223371266318,1.18143432568886,1.26668106709558,1.51460264546469,0.736399189138395,0.80823028409406,0.710019185033229,0.604512589365842,0.339121184620975,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0.36497735907583,0,0,0,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,0,0,0.590789906681404,0,0,1.54411029268673,0,0,0.100528972411631,0.0925884451585296,3.9096996637239,2.07986957055916,0,2.55046890945169,1.17408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,1.32072651019839,1.24396869324463,1.44119953416961,1.64115163454294,5.58781469771088,4.20187268114105,4.68869788840188,3.4214489204541,2.77634230298973,5.40617504119051,2.00078502841405,0.897048674762886,0.87192013766656,0.51336800074665,0.646358578788889,10.7296933755565,0,0,1.04007436911366,0,2.83698264046557,1.5985330740966,0.714889968290738,0,0,0.977208552881205,0.355391948742546,0,1.20575750823834,0.871533458600294,0.199945982364114,0,0,0,0.479249710983165,3.44585807502342,0,0.289562613335158,0.205476322550383,0.537182889719687,0,0,0,0,0,1.30139853857622,2.31986643833309,0.335032530668698,0.637938751653163,0,0,0,2.57652132610194,2.50085260529839,1.08506009479894,1.66376689224646,2.3195768543631,0.946214490203608,0.937131319941706,1.20378439891088,0,3.10419213877515,0,0.737476674166813,0.695068915744663,1.95801157462741,0.686286847621712,0,0,0,0,0,0,0.248107807818777,1.07423381301644,0.841980283299221,0.768834895534206,0.511707249066704,0.804269605718038,1.48418066444991,1.23367755042124,0.355123450626254,1.06765302817952,0.519254429183621,0.581051892299796,0,0.200506470303285,0,0,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0.431831832204279,0,1.35473218771926,0.501689773854853,0,0,0,0,0,0.512900250232778,2.95213181129735,4.55529752530024,0.309123034943167,1.00726411300178,0.907604499126468,0,0,0,1.25671933779759,1.3864375540318,0.921022048356777,1.10269257987624,1.71872391789238,0.870100163485371,0.93749290157711,1.60257664164127,0,0,0,0,0,1.25924938732256,0.6970372701606,0,0.532306030317022,0,0.9266210955196,0.715624433709956,0.372158369359667,1.58189712359363,0.953150969619124,0.767693373934002,0.42793898803392,0.318203247925937,0.78494864019923,0.539617372749944,0.823611089208164,0.589062011728432,1.2130948894399,0,0.842516912477962,0,0,0,0.409499734223957,0.424216295861138,2.26016233240486,0.551365343546124,0,0.438450885253763,0.578775534266688,0,0,0.30982349809975,0.563391205064483,0.286822704408103,0.0982490410131212,0,0.709522128141196,1.05553817648832,0.329294892959902,0,1.04980416073495,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0.432807638929335,0,0,0,0,0,0.324621940274555,0,1.14117339516596,0.47003968731907,0,0.169291777801603,0.321176150207399,0.403599414382095,0.425846237690326,0,0.307240764308458,0,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0.121360521749513,0.111443384277478,0,0.71623345421307,0,0,0,0.844016498463076,0,0.16480387422676,1.26675244876796,0.996239941255349,0,0,0.409074730008619,0,0,0,0,2.04628948090749,0.197286811273867,0,1.11136990144637,0,0.463840490809256,0,0,0,0,0,1.5255219017566,0,0.344743373241465,0,0.520874984799877,0,0.120596438625408,0,0,0.295547618953547,0.658156191461918,0.21787692703798,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0.784901281975124,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,2.15683625538167,0,0.937057782901357,0,0,0,0,0,1.53036380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| |||
|short_description=p@chr19:1360950..1360985,+ | |||
}} |
Revision as of 20:15, 20 January 2014
Short description: | p@chr19:1360950..1360985, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1360950..1360985, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 2.85e-14 | 59 |
migratory neural crest cell | 1.13e-13 | 41 |
pigment cell | 6.35e-12 | 14 |
ectodermal cell | 2.30e-11 | 72 |
glial cell (sensu Vertebrata) | 2.53e-11 | 15 |
glial cell | 2.53e-11 | 15 |
glioblast | 2.53e-11 | 15 |
glioblast (sensu Vertebrata) | 2.53e-11 | 15 |
neuron associated cell | 8.42e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 8.42e-10 | 17 |
columnar/cuboidal epithelial cell | 1.59e-09 | 27 |
neurecto-epithelial cell | 7.23e-09 | 20 |
melanocyte | 9.27e-09 | 10 |
melanoblast | 9.27e-09 | 10 |
neural cell | 1.50e-08 | 25 |