FFCP PHASE1:Hg19::chr19:7570395..7570427,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374877 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24745 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000477473,uc010xjo.1_5end | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_5_at_C19orf45_5end | |||
|id=chr19:7570395..7570427,+ | |||
|ontology_enrichment_celltype=CL:0000242!2.99e-08!2;CL:0002535!1.78e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;3.20e-31;2!CL:0000242;3.20e-31;2!CL:0000167;5.11e-17;1!CL:0000164;5.11e-17;1!CL:0000502;5.11e-17;1!CL:0000172;5.11e-17;1!CL:0000173;5.11e-17;1!CL:0000312;4.00e-13;5!CL:0000240;4.26e-11;6!CL:0000311;4.26e-11;6!CL:0000079;4.26e-11;6!CL:0000237;4.26e-11;6!CL:0002535;7.21e-09;2!CL:0000082;5.95e-08;19!CL:0000362;1.07e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.18e-31,2;CL:0000167,5.53e-17,1;CL:0000164,5.53e-17,1;CL:0000502,5.53e-17,1;CL:0000172,5.53e-17,1;CL:0000173,5.53e-17,1;CL:0002351,5.53e-17,1;CL:0000312,3.43e-13,5;CL:0000240,3.75e-11,6;CL:0000311,3.75e-11,6;CL:0000079,3.75e-11,6;CL:0000237,3.75e-11,6;CL:0000036,3.75e-11,6;CL:0000357,3.75e-11,6;CL:0000114,3.75e-11,6;CL:0002535,6.94e-09,2;CL:0000082,5.88e-08,19;CL:0000362,9.85e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002351;5.11e-17;1!CL:0000357;4.26e-11;6!CL:0000114;4.26e-11;6 | |||
|ontology_enrichment_disease=DOID:305!1.50e-10!106;DOID:5409!1.33e-08!4;DOID:0050687!2.81e-07!143;DOID:3493!2.89e-07!2;DOID:0050615!3.30e-07!16;DOID:299!3.68e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:4430;5.11e-17;1!DOID:0050619;8.85e-17;1!DOID:1357;8.85e-17;1!DOID:5409;1.72e-16;4!DOID:0050615;8.45e-16;16!DOID:1324;6.30e-10;15!DOID:1325;7.81e-10;7!DOID:3904;7.81e-10;7!DOID:3905;7.63e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,5.53e-17,1;DOID:0050619,8.86e-17,1;DOID:1357,8.86e-17,1;DOID:5409,1.66e-16,4;DOID:0050615,8.29e-16,16;DOID:1324,6.20e-10,15;DOID:1325,7.64e-10,7;DOID:3904,7.64e-10,7;DOID:305,1.26e-08,106;DOID:0050687,6.73e-08,143;DOID:3905,7.51e-08,9;DOID:162,8.46e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0005409!9.03e-13!35;UBERON:0000160!3.40e-10!27;UBERON:0000002!4.85e-09!6;UBERON:0001560!4.85e-09!6;UBERON:0004175!7.06e-09!25;UBERON:0004921!1.64e-08!129;UBERON:0004185!1.64e-08!129;UBERON:0001007!1.08e-07!155;UBERON:0001555!1.08e-07!155;UBERON:0007026!1.08e-07!155;UBERON:0006955!1.78e-07!2;UBERON:0004801!1.78e-07!2;UBERON:0000059!1.79e-07!11;UBERON:0000341!2.63e-07!2;UBERON:0004119!2.85e-07!169;UBERON:0000925!2.85e-07!169;UBERON:0006595!2.85e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;8.85e-17;1!UBERON:0001825;8.85e-17;1!UBERON:0002108;4.96e-13;4!UBERON:0006955;7.21e-09;2!UBERON:0004801;7.21e-09;2!UBERON:0004802;5.95e-08;19!UBERON:0000115;5.95e-08;19!UBERON:0002048;6.16e-07;22!UBERON:0004807;6.16e-07;22!UBERON:0000117;6.16e-07;22!UBERON:0000171;6.16e-07;22!UBERON:0000170;6.16e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,8.86e-17,1;UBERON:0001825,8.86e-17,1;UBERON:0002108,5.95e-13,4;UBERON:0006955,6.94e-09,2;UBERON:0004801,6.94e-09,2;UBERON:0004802,5.88e-08,19;UBERON:0000115,5.88e-08,19;UBERON:0002048,6.10e-07,22;UBERON:0000117,6.10e-07,22;UBERON:0000171,6.10e-07,22;UBERON:0000170,6.10e-07,22;UBERON:0005597,6.10e-07,22;UBERON:0000118,6.10e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0,0.640358984218058,0,0.576361668616424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.34333520085005,0,0,0,0,0,0,0,0,0,0,0,5.65394746500843,0,0.122026264901963,0,0,0,0,0,0,0,0,0,2.81000943484129,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0.295712172434091,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889851215136553,0.078493092850514,0,0.280272163313789,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,0,0,0,0.294450700845729,0.121917924982269,0,0,0,0,0.701818390386317,0,0,3.61427462524672,0.329821550236287,11.6241389546339,1.00326405540328,0.655678681511872,8.46571133450741,0,11.5481508079797,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0.186224142887574,0,0,0,0,0,0,0.215166616178029,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p5@C19orf45 | |||
}} |
Revision as of 20:59, 20 January 2014
Short description: | p5@C19orf45 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C19orf45_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | 0bp_to_ENST00000477473, uc010xjo.1_5end |
EntrezGene: | C19orf45 |
HGNC: | 24745 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.18e-31 | 2 |
peptide hormone secreting cell | 5.53e-17 | 1 |
enteroendocrine cell | 5.53e-17 | 1 |
type D enteroendocrine cell | 5.53e-17 | 1 |
somatostatin secreting cell | 5.53e-17 | 1 |
pancreatic D cell | 5.53e-17 | 1 |
progenitor cell of endocrine pancreas | 5.53e-17 | 1 |
keratinocyte | 3.43e-13 | 5 |
stratified squamous epithelial cell | 3.75e-11 | 6 |
keratin accumulating cell | 3.75e-11 | 6 |
stratified epithelial cell | 3.75e-11 | 6 |
keratinizing barrier epithelial cell | 3.75e-11 | 6 |
epithelial fate stem cell | 3.75e-11 | 6 |
stratified epithelial stem cell | 3.75e-11 | 6 |
surface ectodermal cell | 3.75e-11 | 6 |
epithelial cell of cervix | 6.94e-09 | 2 |
epithelial cell of lung | 5.88e-08 | 19 |
epidermal cell | 9.85e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 8.86e-17 | 1 |
paranasal sinus | 8.86e-17 | 1 |
small intestine | 5.95e-13 | 4 |
uterine epithelium | 6.94e-09 | 2 |
cervix epithelium | 6.94e-09 | 2 |
respiratory tract epithelium | 5.88e-08 | 19 |
lung epithelium | 5.88e-08 | 19 |
lung | 6.10e-07 | 22 |
respiratory tube | 6.10e-07 | 22 |
respiration organ | 6.10e-07 | 22 |
pair of lungs | 6.10e-07 | 22 |
lung primordium | 6.10e-07 | 22 |
lung bud | 6.10e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 5.53e-17 | 1 |
paranasal sinus cancer | 8.86e-17 | 1 |
maxillary sinus cancer | 8.86e-17 | 1 |
lung small cell carcinoma | 1.66e-16 | 4 |
respiratory system cancer | 8.29e-16 | 16 |
lung cancer | 6.20e-10 | 15 |
bronchus cancer | 7.64e-10 | 7 |
bronchogenic carcinoma | 7.64e-10 | 7 |
carcinoma | 1.26e-08 | 106 |
cell type cancer | 6.73e-08 | 143 |
lung carcinoma | 7.51e-08 | 9 |
cancer | 8.46e-07 | 235 |