FFCP PHASE1:Hg19::chr19:7828124..7828137,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13523 | |||
|TSSclassifier=strong | |||
|UniProt=Q9H2X3,F8WFB3,C9JXP3,E7ENS9,B4E2Z5 | |||
|association_with_transcript=89bp_to_ENST00000248228,ENST00000327325,ENST00000334806,ENST00000357361,ENST00000358690,ENST00000359059,ENST00000394122,NM_001144904,NM_001144905,NM_001144906,NM_001144907,NM_001144908,NM_001144909,NM_001144910,NM_001144911,NM_014257,NR_026707,NR_026708,NR_026709,uc002mhy.2,uc002mhz.2,uc002mia.2,uc002mic.2,uc002mih.2,uc010dvs.2,uc010dvt.2,uc010xjv.1,uc010xjw.1,uc010xjx.1_5end | |||
|coexpression_cluster_id=C2505 | |||
|description=CAGE_peak_1_at_CLEC4M_5end | |||
|id=chr19:7828124..7828137,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002262;2.49e-10;2!CL:1000398;2.49e-10;2!CL:0000182;5.31e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.49e-10,2;CL:1000398,2.49e-10,2;CL:0000182,5.31e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.89e-10;2!UBERON:0004161;1.42e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!4.77e-14!2;UBERON:0003127!5.44e-14!2;UBERON:0007023!3.98e-11!115;UBERON:0004119!6.75e-10!169;UBERON:0000925!6.75e-10!169;UBERON:0006595!6.75e-10!169;UBERON:0001007!8.91e-10!155;UBERON:0001555!8.91e-10!155;UBERON:0007026!8.91e-10!155;UBERON:0004921!1.49e-09!129;UBERON:0004185!1.49e-09!129;UBERON:0001041!1.05e-08!98;UBERON:0005057!1.06e-08!26;UBERON:0002368!2.22e-08!35;UBERON:0000029!2.70e-08!1;UBERON:0000077!2.90e-08!130;UBERON:0002426!4.99e-08!1;UBERON:0003831!4.99e-08!1;UBERON:0003898!4.99e-08!1;UBERON:0004830!4.99e-08!1;UBERON:0001774!4.99e-08!1;UBERON:0003830!4.99e-08!1;UBERON:0005175!4.99e-08!1;UBERON:0003897!4.99e-08!1;UBERON:0001103!4.99e-08!1;UBERON:0010084!4.99e-08!1;UBERON:0001831!6.52e-08!1;UBERON:0001567!6.52e-08!1;UBERON:0008801!6.52e-08!1;UBERON:0001736!7.97e-08!1;UBERON:0006298!7.97e-08!1;UBERON:0001154!9.10e-08!1;UBERON:0001153!9.10e-08!1;UBERON:0002530!1.44e-07!59;UBERON:0002372!1.64e-07!1;UBERON:0001961!1.64e-07!1;UBERON:0001744!1.64e-07!1;UBERON:0001735!1.64e-07!1;UBERON:0002365!2.80e-07!31;UBERON:0002330!2.80e-07!31;UBERON:0009854!3.84e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;8.95e-20;1!UBERON:0002426;5.14e-19;1!UBERON:0003831;5.14e-19;1!UBERON:0003898;5.14e-19;1!UBERON:0004830;5.14e-19;1!UBERON:0003830;5.14e-19;1!UBERON:0005175;5.14e-19;1!UBERON:0001774;5.14e-19;1!UBERON:0001103;5.14e-19;1!UBERON:0002107;1.15e-15;19!UBERON:0006925;1.15e-15;19!UBERON:0002423;5.38e-12;25!UBERON:0001281;2.49e-10;2!UBERON:0003497;2.49e-10;2!UBERON:0003909;2.49e-10;2!UBERON:0003835;2.49e-10;2!UBERON:0005090;3.42e-10;2!UBERON:0001630;3.42e-10;2!UBERON:0002365;1.19e-09;31!UBERON:0002330;1.19e-09;31!UBERON:0002368;8.92e-08;33!UBERON:0001280;2.63e-07;3!UBERON:0004647;2.63e-07;3!UBERON:0002114;2.97e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,8.95e-20,1;UBERON:0002426,4.69e-19,1;UBERON:0003831,4.69e-19,1;UBERON:0003898,4.69e-19,1;UBERON:0004830,4.69e-19,1;UBERON:0003830,4.69e-19,1;UBERON:0005175,4.69e-19,1;UBERON:0001774,4.69e-19,1;UBERON:0001103,4.69e-19,1;UBERON:0010084,4.69e-19,1;UBERON:0002107,1.15e-15,19;UBERON:0006925,1.15e-15,19;UBERON:0008836,1.15e-15,19;UBERON:0008835,1.39e-13,22;UBERON:0003894,1.39e-13,22;UBERON:0009854,5.23e-13,23;UBERON:0007499,5.38e-12,25;UBERON:0009497,5.38e-12,25;UBERON:0000015,5.38e-12,25;UBERON:0002423,5.38e-12,25;UBERON:0006235,5.38e-12,25;UBERON:0004161,5.38e-12,25;UBERON:0009856,1.51e-11,26;UBERON:0001281,2.49e-10,2;UBERON:0003497,2.49e-10,2;UBERON:0003909,2.49e-10,2;UBERON:0003835,2.49e-10,2;UBERON:0005090,3.27e-10,2;UBERON:0001630,3.27e-10,2;UBERON:0002365,9.77e-10,31;UBERON:0002330,9.77e-10,31;UBERON:0002368,1.17e-08,35;UBERON:0001280,2.63e-07,3;UBERON:0004647,2.63e-07,3;UBERON:0005171,2.63e-07,3;UBERON:0002114,2.97e-07,2;UBERON:0000949,8.65e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42893272774789,0,0,0,0,0,11.2250082269467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.22468147755661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61304623806218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,1.60515529459758,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,6.59485051551371,10.6005511129777,0,0,0,0,0.106787412567695,0,0,16.8696447416063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.975726071789027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.186224142887574,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.502055437748735,0.332660356546013,0,0,0,0,0,0,0,0,8.65477312441413,0 | |||
|short_description=p1@CLEC4M | |||
}} |
Revision as of 21:02, 20 January 2014
Short description: | p1@CLEC4M |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLEC4M_5end |
Coexpression cluster: | C2505_Hepatocyte_lymph_vein_liver_Dendritic_left_submaxillary |
Association with transcript: | 89bp_to_ENST00000248228, ENST00000327325, ENST00000334806, ENST00000357361, ENST00000358690, ENST00000359059, ENST00000394122, NM_001144904, NM_001144905, NM_001144906, NM_001144907, NM_001144908, NM_001144909, NM_001144910, NM_001144911, NM_014257, NR_026707, NR_026708, NR_026709, uc002mhy.2, uc002mhz.2, uc002mia.2, uc002mic.2, uc002mih.2, uc010dvs.2, uc010dvt.2, uc010xjv.1, uc010xjw.1, uc010xjx.1_5end |
EntrezGene: | CLEC4M |
HGNC: | 13523 |
UniProt: | Q9H2X3F8WFB3C9JXP3E7ENS9B4E2Z5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.49e-10 | 2 |
endothelial cell of hepatic sinusoid | 2.49e-10 | 2 |
hepatocyte | 5.31e-07 | 12 |