FFCP PHASE1:Hg19::chr2:20793203..20793224,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:20793203..20793224,- | |||
|id=chr2:20793203..20793224,- | |||
|ontology_enrichment_celltype=CL:0000181!4.53e-10!12;CL:0000417!4.53e-10!12;CL:0000668!4.53e-10!12;CL:0000414!4.53e-10!12;CL:0000412!4.53e-10!12;CL:0000182!4.53e-10!12;CL:0000223!1.80e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.40e-50;12!CL:0002549;1.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.51e-50,12;CL:0000223,4.68e-13,58;CL:0002549,2.25e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.74e-40;11!UBERON:0009497;4.50e-34;13!UBERON:0003104;3.42e-19;31!UBERON:0001041;1.22e-14;30!CL:0000223;2.02e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;1.96e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,5.81e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007499!3.49e-09!25;UBERON:0002107!4.37e-09!19;UBERON:0006925!4.37e-09!19;UBERON:0008836!4.37e-09!19;UBERON:0008835!4.70e-09!22;UBERON:0003894!4.70e-09!22;UBERON:0009856!1.05e-08!26;UBERON:0009854!1.55e-08!23;UBERON:0005057!2.73e-08!26;UBERON:0005177!9.49e-08!107;UBERON:0009497!1.26e-07!25;UBERON:0000015!1.26e-07!25;UBERON:0002423!1.26e-07!25;UBERON:0006235!1.26e-07!25;UBERON:0004161!1.26e-07!25;UBERON:0005172!1.73e-07!55;UBERON:0005173!1.73e-07!55;UBERON:0000466!2.49e-07!126;UBERON:0005911!2.50e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.89e-52;19!UBERON:0006925;4.89e-52;19!UBERON:0002423;2.32e-39;25!UBERON:0002365;1.28e-30;31!UBERON:0002330;1.28e-30;31!UBERON:0002368;7.23e-27;33!UBERON:0000949;2.97e-19;43!UBERON:0005172;4.80e-14;52!UBERON:0005173;4.80e-14;52!UBERON:0002417;2.59e-13;58!UBERON:0000916;2.59e-13;58!UBERON:0002530;1.24e-09;57!UBERON:0005629;1.93e-07;2!UBERON:0005358;1.93e-07;2!UBERON:0001886;1.93e-07;2!UBERON:0004086;1.93e-07;2!UBERON:0005282;1.93e-07;2!UBERON:0005281;1.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.20e-52,19;UBERON:0006925,5.20e-52,19;UBERON:0008836,5.20e-52,19;UBERON:0008835,8.18e-45,22;UBERON:0003894,8.18e-45,22;UBERON:0009854,7.86e-43,23;UBERON:0007499,2.43e-39,25;UBERON:0009497,2.43e-39,25;UBERON:0000015,2.43e-39,25;UBERON:0002423,2.43e-39,25;UBERON:0006235,2.43e-39,25;UBERON:0004161,2.43e-39,25;UBERON:0009856,8.52e-38,26;UBERON:0002365,1.45e-31,31;UBERON:0002330,1.45e-31,31;UBERON:0002368,7.37e-28,35;UBERON:0005172,6.65e-22,54;UBERON:0005173,6.65e-22,54;UBERON:0000949,1.81e-21,45;UBERON:0002417,1.33e-19,60;UBERON:0000916,1.33e-19,60;UBERON:0003929,9.86e-18,54;UBERON:0002530,3.79e-16,59;UBERON:0005911,2.46e-11,82;UBERON:0005177,3.65e-11,101;UBERON:0001041,1.26e-10,87;UBERON:0009569,6.04e-10,112;UBERON:0003914,1.76e-09,117;UBERON:0005256,4.86e-09,122;UBERON:0003104,4.58e-08,160;UBERON:0009142,4.58e-08,160;UBERON:0004921,1.76e-07,118;UBERON:0005629,2.25e-07,2;UBERON:0005358,2.25e-07,2;UBERON:0001886,2.25e-07,2;UBERON:0004086,2.25e-07,2;UBERON:0005282,2.25e-07,2;UBERON:0005281,2.25e-07,2;UBERON:0000490,3.16e-07,148 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0.580418477257168,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,3.9313088667105,2.95394953340702,0,0.860919069801795,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.464841513839837,0.846016147141356,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.847294206991012,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12493582569533,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392125068635479,0.503464760927528,0,0,0,0.163232808159148,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0.293977192243133,0.174118413160805,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,1.16495949527454,3.23011047459617,2.39005989305383,3.70719491198017,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0.113312091520126,1.61207457045891,1.32506888912221,0,0,0.171086837884329,0,0,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0.624902039810533,0,0,0.470531639396343,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0,0,0,0,0,0.406870733204662,0,0.429642228169954,0,0.796191777397232,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0085253435176,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,1.72742072974897,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0.31020638566432,1.91107787795487,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,0.162806537221949,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p@chr2:20793203..20793224,- | |||
}} |
Revision as of 01:57, 21 January 2014
Short description: | p@chr2:20793203..20793224, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:20793203..20793224, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.51e-50 | 12 |
endodermal cell | 4.68e-13 | 58 |
fibroblast of choroid plexus | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 5.81e-08 | 39 |