FFCP PHASE1:Hg19::chr2:64681279..64681316,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25012 | |||
|TSSclassifier=strong | |||
|UniProt=Q3ZCW2 | |||
|association_with_transcript=-10bp_to_NM_014181,uc002scy.3_5end | |||
|description=CAGE_peak_2_at_LGALSL_5end | |||
|id=chr2:64681279..64681316,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.75e-18!254;CL:0000223!2.31e-08!59;CL:0002076!3.00e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.08e-18,253;CL:0000223,1.01e-09,58;CL:0002076,2.34e-08,42 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.74e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.17e-16!115;UBERON:0000481!1.76e-14!347;UBERON:0000468!1.79e-14!659;UBERON:0000922!4.30e-14!612;UBERON:0000480!5.35e-12!626;UBERON:0000467!9.76e-12!625;UBERON:0004119!1.19e-11!169;UBERON:0000925!1.19e-11!169;UBERON:0006595!1.19e-11!169;UBERON:0002050!1.43e-11!605;UBERON:0005423!1.43e-11!605;UBERON:0000466!1.59e-11!126;UBERON:0001007!2.09e-11!155;UBERON:0001555!2.09e-11!155;UBERON:0007026!2.09e-11!155;UBERON:0000923!3.22e-11!604;UBERON:0005291!3.22e-11!604;UBERON:0006598!3.22e-11!604;UBERON:0002532!3.22e-11!604;UBERON:0000064!2.26e-10!219;UBERON:0005177!6.87e-10!107;UBERON:0000062!8.94e-10!511;UBERON:0004921!1.14e-09!129;UBERON:0004185!1.14e-09!129;UBERON:0000464!1.47e-09!104;UBERON:0002417!3.72e-09!61;UBERON:0000916!3.72e-09!61;UBERON:0009569!4.03e-09!113;UBERON:0003103!8.76e-09!69;UBERON:0005172!1.30e-08!55;UBERON:0005173!1.30e-08!55;UBERON:0003104!2.09e-08!238;UBERON:0009142!2.09e-08!238;UBERON:0000477!2.42e-08!286;UBERON:0000077!3.66e-08!130;UBERON:0001048!4.10e-08!168;UBERON:0004111!4.26e-08!241;UBERON:0002553!8.25e-08!70;UBERON:0000483!3.57e-07!309;UBERON:0000119!5.41e-07!312;UBERON:0000475!5.87e-07!365;UBERON:0002365!7.04e-07!31;UBERON:0002330!7.04e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.68e-08;33!UBERON:0002365;2.14e-07;31!UBERON:0002330;2.14e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.10e-16,114;UBERON:0001007,1.89e-12,145;UBERON:0001555,1.89e-12,145;UBERON:0007026,1.89e-12,145;UBERON:0004119,2.17e-12,160;UBERON:0000925,2.17e-12,160;UBERON:0006595,2.17e-12,160;UBERON:0000922,2.26e-11,592;UBERON:0004921,3.89e-11,118;UBERON:0005177,2.28e-10,101;UBERON:0002417,9.88e-10,60;UBERON:0000916,9.88e-10,60;UBERON:0005423,1.13e-09,581;UBERON:0009569,2.24e-09,112;UBERON:0005172,3.62e-09,54;UBERON:0005173,3.62e-09,54;UBERON:0011216,1.50e-08,223;UBERON:0003103,1.60e-08,68;UBERON:0001048,2.00e-08,160;UBERON:0001041,6.68e-08,87;UBERON:0002365,1.95e-07,31;UBERON:0002330,1.95e-07,31;UBERON:0000033,2.27e-07,56;UBERON:0001444,4.79e-07,49;UBERON:0002050,4.87e-07,564;UBERON:0004111,6.73e-07,240;UBERON:0005409,7.88e-07,25 | |||
|phase1_expression=1.63510541343501,1.71280419112787,1.9733616573436,2.00146596706261,5.36353313312745,5.23403114460221,0,2.52687949370732,0.783556884599516,1.47440361900905,8.37361401566913,2.83973783769224,3.16520373874144,1.60896258848061,1.32558950291166,0.672325146451775,0.602694528023977,0,0.487932798790507,0.492484232307152,0.408001382488506,1.88072832886853,0.286235987131057,1.64249310087461,2.51085279189606,0.916960868975415,1.39571002064908,0.708397031823113,0.393364276848904,1.15148819429164,0.77408061658038,1.83884244895785,6.92773613189975,6.28581817283539,0,0.142169232487422,0.293600439334847,0,0,0.217010870715852,0.671746422719773,0.647787332037959,0,1.01778767145695,0,0.485168122375632,1.16214518452842,0,0.619412741790207,0.575384784644301,0,0,0,0.645484683583826,0,0.564727018627814,0.272906150057846,0,0.612167784741805,0,0,1.31940520074686,0.199463657621632,0.426224750532694,0.580418477257168,1.13477044938228,1.86846674698672,0.75374599577023,1.0429658368404,0.434377689410233,2.42159801053347,0.368277635987565,0,0,0,0,0,0.300353785683013,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.520237390239513,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,3.45228916977532,4.3372698286148,4.01070328508712,2.75208386025565,2.3858578411533,6.32625331393427,1.79616152611729,1.33037638477538,2.10803485663503,3.01251873644739,3.27865759463288,4.82019775619758,2.92092654289215,4.00498395788315,1.72845348674525,0.715471872916026,0,0,1.59009925893364,0.860234595106124,2.77712401286075,1.69592382577203,2.09749718104953,2.20094433552054,1.67195973229448,2.58416759169329,4.62496141492723,1.67360306382335,3.62546385398232,2.28081631715554,3.66093086322254,1.47065232138347,2.43042584364528,1.60739510911344,1.79623498100936,2.92789849256638,1.53316637465883,0,1.28241220751285,2.63560834872127,7.75560528296651,4.79703457356788,4.96971951695318,3.03913227994991,0.397227542439656,0.573673241497627,0.709336764396714,5.60677600142307,2.1349799145941,0.98667019366864,5.60179863719579,3.63718814588158,1.63461903113459,4.08665054641315,2.88087962239999,1.40592859100278,1.24864030732128,0.570471821544449,0.896692083310806,2.23125547423153,2.5899671098901,1.12360645361799,1.42907919878425,1.59684612505298,2.06651562351531,1.18800285728205,3.21447008062124,2.73048408581408,0.718618141816238,1.85169725349473,2.12701483782339,1.10825646193673,2.19488810440419,2.14541457059314,3.60571341375832,0.907457465280168,0,0.640672166455702,0.211931901159562,0,0.206105058476878,0.772921620136887,1.48893485065272,0.168776332241266,0.584622030967192,0,0.276149695926898,1.45481451136931,0,0.10075209822764,0.847802961552438,6.95739071387869,4.90943017063502,10.0381608386151,11.465528376182,7.42166702600317,7.08783051504062,7.56725701612204,7.56962552626885,4.74470566798579,0,0.643240938192885,0,0,0,2.01121560067735,2.19160097101532,0.964044119533928,1.7647035637183,2.17879444092406,1.18635309555548,2.02246962240247,1.56977172100277,2.69323009862473,7.38155454624648,1.40241773803446,1.6462960453256,0,0,1.96565443335525,2.36315962672562,0,5.53447973444011,1.20097467208968,5.04851312879678,3.37205259772859,3.61904300681871,3.79612625149971,1.3032332212413,2.07986957055916,1.44331342025273,5.56465943880369,1.76113041353732,2.16549671641611,2.77791307545966,1.90254152234598,0.790204397959275,0.858486162094873,1.23108503043699,5.14809383306323,2.37809859661965,4.68669169933885,5.54341023056236,5.38745369521069,5.10483579406235,4.06887513919547,4.21720947081732,0,0,3.31724984865235,2.45003920808834,1.38866676769018,0.380987365753014,1.52795370223311,0,1.71072446022705,0.925447434329912,0,1.71495859578347,1.34557301214433,1.74384027533312,0.5867062865676,1.68053230485111,0,0.845302752556,1.06375246633948,1.04007436911366,0.514414748524284,0,0.266422179016099,2.28764789853036,1.62786481617433,0,0,2.48774364119782,0.791951872933429,1.80863626235752,0.871533458600294,4.09889263846434,6.08118903205952,0.502257091432126,0,2.15662369942424,10.3375742250703,4.27910715122155,0.723906533337896,1.02738161275192,1.07436577943937,0,0,0,0,2.03275699377971,1.30139853857622,0,1.34013012267479,1.27587750330633,0.749007023947182,5.9832291840805,4.55857064779639,3.0672872929785,2.00068208423871,1.62759014219841,6.03115498439341,4.28229573113188,6.15039418632345,5.38850508966481,1.80567659836631,2.27407504055985,1.03473071292505,0.664225598535437,2.94990669666725,0.434418072340414,1.37060810223918,2.05886054286514,0.620304078368662,0.215714200818617,0.320182673410333,1.21251028578504,1.66435439510497,0.30239029332968,2.97729369382532,0.306923946576125,1.12264037773229,1.79394808957981,6.14048698880044,2.2519548960105,2.96836132889982,1.07946785661859,0.710246901252508,1.14978018419333,0,1.16210378459959,3.98836183652353,3.20810352485256,6.81399318125633,0.68888668898764,0.182091168006717,0.786746489756545,5.86559496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| |||
|short_description=p2@LGALSL | |||
}} |
Revision as of 03:31, 21 January 2014
Short description: | p2@LGALSL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LGALSL_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_NM_014181, uc002scy.3_5end |
EntrezGene: | LGALSL |
HGNC: | 25012 |
UniProt: | Q3ZCW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.08e-18 | 253 |
endodermal cell | 1.01e-09 | 58 |
endo-epithelial cell | 2.34e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.10e-16 | 114 |
digestive system | 1.89e-12 | 145 |
digestive tract | 1.89e-12 | 145 |
primitive gut | 1.89e-12 | 145 |
endoderm-derived structure | 2.17e-12 | 160 |
endoderm | 2.17e-12 | 160 |
presumptive endoderm | 2.17e-12 | 160 |
embryo | 2.26e-11 | 592 |
subdivision of digestive tract | 3.89e-11 | 118 |
trunk region element | 2.28e-10 | 101 |
abdominal segment of trunk | 9.88e-10 | 60 |
abdomen | 9.88e-10 | 60 |
developing anatomical structure | 1.13e-09 | 581 |
subdivision of trunk | 2.24e-09 | 112 |
abdomen element | 3.62e-09 | 54 |
abdominal segment element | 3.62e-09 | 54 |
organ system subdivision | 1.50e-08 | 223 |
compound organ | 1.60e-08 | 68 |
primordium | 2.00e-08 | 160 |
foregut | 6.68e-08 | 87 |
exocrine gland | 1.95e-07 | 31 |
exocrine system | 1.95e-07 | 31 |
head | 2.27e-07 | 56 |
subdivision of head | 4.79e-07 | 49 |
embryonic structure | 4.87e-07 | 564 |
anatomical conduit | 6.73e-07 | 240 |
gastrointestinal system | 7.88e-07 | 25 |