FFCP PHASE1:Hg19::chr2:85892885..85892890,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6439 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10801 | |||
|TSSclassifier=strong | |||
|UniProt=P07988 | |||
|association_with_transcript=5bp_to_M19097_5end | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_23_at_SFTPB_5end | |||
|id=chr2:85892885..85892890,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.74e-15;29!UBERON:0001041;1.90e-14;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!7.48e-30!1;UBERON:0006518!7.48e-30!1;UBERON:0008949!7.48e-30!1;UBERON:0000101!7.48e-30!1;UBERON:0002167!7.48e-30!1;UBERON:0002048!2.09e-12!22;UBERON:0000117!2.09e-12!22;UBERON:0000171!2.09e-12!22;UBERON:0000170!2.09e-12!22;UBERON:0005597!2.09e-12!22;UBERON:0000118!2.09e-12!22;UBERON:0005178!2.86e-08!34;UBERON:0002224!2.86e-08!34;UBERON:0005181!4.72e-08!35;UBERON:0005153!1.19e-07!37;UBERON:0008947!1.82e-07!38;UBERON:0003258!1.82e-07!38;UBERON:0002046!6.77e-07!5;UBERON:0004117!6.77e-07!5;UBERON:0007689!6.77e-07!5;UBERON:0007123!6.77e-07!5;UBERON:0003091!6.77e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;9.37e-99;1!UBERON:0006518;9.37e-99;1!UBERON:0008949;9.37e-99;1!UBERON:0000101;9.37e-99;1!UBERON:0002167;9.37e-99;1!UBERON:0002048;3.41e-19;22!UBERON:0000117;3.41e-19;22!UBERON:0000171;3.41e-19;22!UBERON:0000170;3.41e-19;22!UBERON:0005178;1.77e-12;34!UBERON:0002224;1.77e-12;34!UBERON:0005181;1.70e-11;35!UBERON:0000065;1.64e-10;44!UBERON:0000915;8.24e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,9.37e-99,1;UBERON:0006518,9.37e-99,1;UBERON:0008949,9.37e-99,1;UBERON:0000101,9.37e-99,1;UBERON:0002167,9.37e-99,1;UBERON:0002048,3.41e-19,22;UBERON:0000117,3.41e-19,22;UBERON:0000171,3.41e-19,22;UBERON:0000170,3.41e-19,22;UBERON:0005597,3.41e-19,22;UBERON:0000118,3.41e-19,22;UBERON:0005178,6.62e-13,34;UBERON:0002224,6.62e-13,34;UBERON:0005181,1.42e-12,35;UBERON:0005153,5.76e-12,37;UBERON:0008947,1.10e-11,38;UBERON:0003258,1.10e-11,38;UBERON:0005157,1.08e-09,47;UBERON:0000915,6.99e-09,52;UBERON:0000065,1.34e-08,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31040978959853,0.628817220398664,4.55662960881915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p23@SFTPB | |||
}} |
Revision as of 04:14, 21 January 2014
Short description: | p23@SFTPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_SFTPB_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 5bp_to_M19097_5end |
EntrezGene: | SFTPB |
HGNC: | 10801 |
UniProt: | P07988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 9.37e-99 | 1 |
right lung lobe | 9.37e-99 | 1 |
lower lobe of lung | 9.37e-99 | 1 |
lobe of lung | 9.37e-99 | 1 |
right lung | 9.37e-99 | 1 |
lung | 3.41e-19 | 22 |
respiratory tube | 3.41e-19 | 22 |
respiration organ | 3.41e-19 | 22 |
pair of lungs | 3.41e-19 | 22 |
lung primordium | 3.41e-19 | 22 |
lung bud | 3.41e-19 | 22 |
thoracic cavity element | 6.62e-13 | 34 |
thoracic cavity | 6.62e-13 | 34 |
thoracic segment organ | 1.42e-12 | 35 |
epithelial bud | 5.76e-12 | 37 |
respiratory primordium | 1.10e-11 | 38 |
endoderm of foregut | 1.10e-11 | 38 |
epithelial fold | 1.08e-09 | 47 |
thoracic segment of trunk | 6.99e-09 | 52 |
respiratory tract | 1.34e-08 | 54 |