FFCP PHASE1:Hg19::chr2:113875466..113875511,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3557 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6000 | |||
|TSSclassifier=strong | |||
|UniProt=P18510,Q53SC2 | |||
|association_with_transcript=0bp_to_ENST00000259206,ENST00000354115,ENST00000361779,NM_000577,NM_173841,NM_173843,uc002tiy.2,uc002tiz.2,uc002tja.2_5end | |||
|description=CAGE_peak_3_at_IL1RN_5end | |||
|id=chr2:113875466..113875511,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.49e-15!43;CL:0000223!1.40e-09!59;CL:0002368!1.80e-09!13;CL:0000066!1.24e-08!254;CL:0002251!4.26e-08!21;CL:0002159!4.01e-07!13;CL:0000557!8.24e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.88e-13;42!CL:0002368;3.77e-12;13!CL:0002159;1.11e-09;14!CL:0002251;1.24e-08;20!CL:0002202;1.21e-07;9!CL:0002632;1.21e-07;9!CL:0000097;1.78e-07;5!CL:0000622;4.09e-07;5!CL:0000990;4.50e-07;8!CL:0000244;6.49e-07;4!CL:0000731;6.49e-07;4!CL:0000840;8.06e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.88e-17,42;CL:0002368,3.60e-12,13;CL:0000223,7.00e-12,58;CL:0000066,1.77e-10,253;CL:0002159,1.10e-09,14;CL:0002251,1.34e-08,20;CL:0000557,6.35e-08,67;CL:0002202,1.19e-07,9;CL:0002632,1.19e-07,9;CL:0000097,1.84e-07,5;CL:0002028,1.84e-07,5;CL:0000990,3.81e-07,8;CL:0000622,4.35e-07,5;CL:0000244,6.40e-07,4;CL:0000731,6.40e-07,4;CL:0000840,7.88e-07,5;CL:0001029,7.88e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000223;4.18e-07;58 | |||
|ontology_enrichment_disease=DOID:1749!2.00e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.65e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.24e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.05e-11!169;UBERON:0000925!3.05e-11!169;UBERON:0006595!3.05e-11!169;UBERON:0000062!3.91e-09!511;UBERON:0000161!8.41e-09!35;UBERON:0000166!1.77e-08!21;UBERON:0000165!3.27e-08!28;UBERON:0000930!3.27e-08!28;UBERON:0001004!4.40e-08!72;UBERON:0001007!2.65e-07!155;UBERON:0001555!2.65e-07!155;UBERON:0007026!2.65e-07!155;UBERON:0000468!3.68e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;1.94e-08;7!UBERON:0001173;1.94e-08;7!UBERON:0000165;1.96e-08;28!UBERON:0000365;1.05e-07;5!UBERON:0000161;1.20e-07;19!UBERON:0000166;1.20e-07;19!UBERON:0000486;3.07e-07;12!UBERON:0000344;6.40e-07;20!UBERON:0003729;7.45e-07;13!UBERON:0000974;7.55e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.28e-13,160;UBERON:0000925,7.28e-13,160;UBERON:0006595,7.28e-13,160;UBERON:0000161,2.24e-09,36;UBERON:0000166,5.67e-09,22;UBERON:0000922,2.60e-08,592;UBERON:0005423,3.00e-08,581;UBERON:0000165,5.27e-08,29;UBERON:0000930,5.27e-08,29;UBERON:0001007,5.36e-08,145;UBERON:0001555,5.36e-08,145;UBERON:0007026,5.36e-08,145;UBERON:0002050,7.51e-08,564;UBERON:0003102,9.55e-08,99;UBERON:0000365,1.00e-07,5;UBERON:0001004,1.44e-07,74;UBERON:0000344,6.52e-07,20;UBERON:0003729,7.16e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,4.91467873003018,6.28021051175185,10.0483031179879,6.06664049925443,0.37129905888014,0,2.01697543935533,0,0.730310090387373,0.975865597581014,2.70866327768933,1.22400414746552,0,0,0,0,0,0,0,0,0,0.619264493264304,28.5020579588467,40.3615931162855,68.4044918808557,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0.411167888021826,1.23882548358041,0,0,0.236482229888585,10.3423704220986,7.10033151942209,9.47985406160392,0.188242339542605,0,0.674170453335254,7.34601341690166,7.70229664982625,13.4260796417799,0,0,0,1.7412554317715,5.6738522469114,9.34233373493363,0.251248665256743,0.521482918420201,0.217188844705117,2.42159801053347,3.31449872388808,7.59509729858123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,63.7516754511949,78.2355174275146,85.6805119248364,83.408144166349,74.5894158510833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.4892613520973,0,0.379891534993739,0.132409180813219,0.286836620748814,0.709336764396714,0,0,0,0.311211035399766,0,0,0.605429710579726,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0.122834317311768,0.103325781175765,1.18800285728205,0,0,0,1.34668891163253,0.250237039743928,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,53.5332563262332,76.3689137654337,62.8102063901918,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,41.5953581698691,12.3641928583382,43.6295740266478,34.7206669344486,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0.984868024349589,148.826712628555,49.9400705290127,29.0574885359009,80.9673857918503,94.5639898606718,1.70161193135412,2.3250715081117,7.28427090413901,70.4508430191199,17.6096868026452,19.9034990919141,7.06187771743111,17.926425546546,0.190493682876507,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,2.43247561282381,3.01354254859276,8.43335757932127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.33440328590885,1.66435439510497,6.04780586659361,0,0,0,0,0,0,0,0.154209693802656,2.30830242907065,0.821271560138091,0,0.348631135379878,0,9.82481704486096,51.7495157819737,0,0,0.131124414959424,12.1823895485001,4.85196623757813,0.784349769176855,0,0.422206515571503,0,0,0.215915916102139,0,0,0,1.01950509218015,0.831076008928724,0.447749509444357,0.657779629937804,0.522870902049801,0,0,0,0.103041011647722,0,0,23.5448870578431,33.8031327938991,0,0.193341436584244,0,0,0,0,0,0.255679882248303,0,48.9243349468495,18.06586633232,8.80527716212631,21.1419761988099,0,0,0,0,0.532306030317022,0.869932992075073,0,0,0,0.316379424718726,0,0,0,1.59101623962968,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0.731140468893853,0,0,0,0,1.10273068709225,0.66343897524122,0,0,0.655894752046633,0,3.0982349809975,0,0,0,0,0,0.211107635297664,0,0,0,42.9150622755784,46.9211592875051,40.2896643986894,0.753150406214233,36.5929566770545,40.4331541602301,61.6367913415979,53.2958288480146,0,0,0,0,0,0,0,0,0,0,2.94048259177238,0,0,0,0,1.99579371432817,0,7.4085753953359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,10.6670108032685,0.73254089635947,0,0.222886768554957,0,32.2305054395881,7.7210817016486,46.381266016984,0,0,1.00177834520615,0,0,0,0.552567831062295,0,0,0,0,24.2644548097782,9.66714343248289,0,1.479651084554,0,0,0,0,0,1.5625665665114,0.0874599999961957,0,5.46208551770398,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,52.8415990815906,9.38793153746324,2.05095700524602,0,0,0,3.50901275705111,0.366390373607449,0.533034776018635,0,3.29658538429552,0.166211681900156,0,0,0,0,2.38404868470568,0,0,0,0,1.99052386215701,5.39591143470369,0,0,0,0,0,0,0,0,2.15231080825299,0,3.94584402849391,0,0,0,0,0,0,0,0,0,1.99226682220855,0,0.694238953340524,48.5062367201169,14.713005912088,1.22308667769421,0,0.0967563312890851,0,0,63.0428607174726,0,7.00540296419651,0,0,0,4.30213042016567,5.21032331634969,9.60538476327087,0,1.00863292007874,0,0,0,0,37.9467395733041,0,0,0,1.15580235960608,0,0,0,0.429765441419957,0.525774708558629,0,0,0,0.399358000997982,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,87.9647915966367,6.96421759102155,0.121499113316049,8.72130187758092,0.551639951094387,1.15400093896996,0,0,0.767660789277781,0,0,0,0,0,0,0,0.656740165994712,0,0,0,0,0,0,0,4.9337051562167,0.213574825135389,0.314408610199332,0.828478110694391,0,0,0,12.1284838976335,0,0.5013797880454,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.705797459094515,0,0,9.70156218764681,2.33713309847224,0,0,0,0,1.14420034198462,0.453692771289717,3.57505561340395,23.9525342983207,0,0,0.465788870628778,0,0,0,0,0.380805212168795,0,2.18218391043071,0,0.928067519756987,0,0,0.686791410365586,0,0,0,0,0,0.226705925512272,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0.194860308839388,1.86010776438708,1.4720885483026,0,0,1.05656061679314,0,0,0,0,17.305959323673,49.3774662249639,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| |||
|short_description=p3@IL1RN | |||
}} |
Revision as of 05:03, 21 January 2014
Short description: | p3@IL1RN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IL1RN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000259206, ENST00000354115, ENST00000361779, NM_000577, NM_173841, NM_173843, uc002tiy.2, uc002tiz.2, uc002tja.2_5end |
EntrezGene: | IL1RN |
HGNC: | 6000 |
UniProt: | P18510Q53SC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.88e-17 | 42 |
respiratory epithelial cell | 3.60e-12 | 13 |
endodermal cell | 7.00e-12 | 58 |
epithelial cell | 1.77e-10 | 253 |
general ecto-epithelial cell | 1.10e-09 | 14 |
epithelial cell of alimentary canal | 1.34e-08 | 20 |
granulocyte monocyte progenitor cell | 6.35e-08 | 67 |
epithelial cell of tracheobronchial tree | 1.19e-07 | 9 |
epithelial cell of lower respiratory tract | 1.19e-07 | 9 |
mast cell | 1.84e-07 | 5 |
basophil mast progenitor cell | 1.84e-07 | 5 |
conventional dendritic cell | 3.81e-07 | 8 |
acinar cell | 4.35e-07 | 5 |
transitional epithelial cell | 6.40e-07 | 4 |
urothelial cell | 6.40e-07 | 4 |
immature conventional dendritic cell | 7.88e-07 | 5 |
common dendritic progenitor | 7.88e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.28e-13 | 160 |
endoderm | 7.28e-13 | 160 |
presumptive endoderm | 7.28e-13 | 160 |
orifice | 2.24e-09 | 36 |
oral opening | 5.67e-09 | 22 |
embryo | 2.60e-08 | 592 |
developing anatomical structure | 3.00e-08 | 581 |
mouth | 5.27e-08 | 29 |
stomodeum | 5.27e-08 | 29 |
digestive system | 5.36e-08 | 145 |
digestive tract | 5.36e-08 | 145 |
primitive gut | 5.36e-08 | 145 |
embryonic structure | 7.51e-08 | 564 |
surface structure | 9.55e-08 | 99 |
urothelium | 1.00e-07 | 5 |
respiratory system | 1.44e-07 | 74 |
mucosa | 6.52e-07 | 20 |
mouth mucosa | 7.16e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.24e-09 | 14 |