FFCP PHASE1:Hg19::chr2:163175088..163175101,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64135 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18873 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BYX4 | |||
|association_with_transcript=-49bp_to_NM_022168,uc002uce.2,uc002ucf.2_5end | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_4_at_IFIH1_5end | |||
|id=chr2:163175088..163175101,- | |||
|ontology_enrichment_celltype=CL:0000738!8.90e-26!140;CL:0002057!4.42e-25!42;CL:0000860!4.73e-24!45;CL:0002087!1.12e-23!119;CL:0002031!7.93e-22!124;CL:0002009!1.83e-19!65;CL:0002194!2.76e-19!63;CL:0000576!2.76e-19!63;CL:0000040!2.76e-19!63;CL:0000559!2.76e-19!63;CL:0000766!2.77e-18!76;CL:0000988!6.45e-18!182;CL:0000557!1.15e-17!71;CL:0002032!1.27e-17!165;CL:0000837!1.27e-17!165;CL:0000037!1.62e-17!172;CL:0000566!1.62e-17!172;CL:0000839!5.02e-17!70;CL:0000763!1.46e-11!112;CL:0000049!1.46e-11!112;CL:0000945!6.14e-08!24;CL:0000826!6.14e-08!24;CL:0002393!1.04e-07!9;CL:0002397!1.04e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.68e-39;33!CL:0002057;4.68e-39;33!CL:0000473;2.14e-28;39!CL:0000234;2.14e-28;39!CL:0000576;8.12e-19;48!CL:0000771;4.47e-16;2!CL:0000766;7.91e-14;69!CL:0000763;1.47e-10;100!CL:0002087;1.11e-07;104!CL:0000081;9.89e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.50e-37,42;CL:0002057,5.50e-37,42;CL:0000473,1.59e-36,48;CL:0000234,1.59e-36,48;CL:0000766,1.30e-29,72;CL:0002194,1.25e-28,59;CL:0000576,1.25e-28,59;CL:0000040,1.25e-28,59;CL:0000559,1.25e-28,59;CL:0002009,1.31e-27,61;CL:0000839,2.51e-25,66;CL:0000557,6.54e-25,67;CL:0000763,1.00e-18,108;CL:0000049,1.00e-18,108;CL:0000771,4.00e-16,2;CL:0000738,5.23e-16,136;CL:0002087,3.12e-15,115;CL:0002031,1.80e-14,120;CL:0000988,5.24e-13,177;CL:0002032,5.47e-13,161;CL:0000837,5.47e-13,161;CL:0000037,2.65e-12,168;CL:0000081,9.70e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.61e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.12e-18!102;UBERON:0003061!1.12e-18!102;UBERON:0002193!2.45e-16!112;UBERON:0002371!2.84e-16!80;UBERON:0001474!3.15e-14!86;UBERON:0002405!2.37e-13!115;UBERON:0004765!6.12e-11!101;UBERON:0001434!6.12e-11!101;UBERON:0001737!2.05e-08!9 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.19e-21,76;UBERON:0002390,6.37e-21,98;UBERON:0003061,6.37e-21,98;UBERON:0001474,7.22e-20,82;UBERON:0002193,1.08e-18,108;UBERON:0004765,7.40e-18,90;UBERON:0002405,3.43e-17,93;UBERON:0001434,8.62e-16,100;UBERON:0002204,1.60e-09,167;UBERON:0003081,2.08e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,0.738905305049512,0.629686250509434,0,0,0,0,0,0,0.154934401160603,0.284338464974843,0,1.66198622559563,0.601633342410425,0.651032612147555,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0.575384784644301,0,1.18241114944293,1.03423704220986,0.645484683583826,1.35426486594342,0,0,0,2.75475503133812,1.28371610830437,4.47535988059329,0.989553900560148,1.39624560335142,0.852449501065388,5.80418477257168,1.70215567407342,1.24564449799115,0.502497330513487,0.521482918420201,1.08594422352558,9.6863920421339,7.36555271975129,6.0127853613768,0.422510572623884,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0,0,0,0.587237189370939,0.382273228125229,1.32171328579026,0.560508562981536,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.674338760312407,0.482022059766964,0.330881918197182,0.871517776369625,0.237270619111097,0.808987848960987,0.98110732562673,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0,0,0,0.763976851116555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,1.29694662238543,0.540031437238115,0,0,0,0,0.371606350251437,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0.276283915531148,0,0,0.246169610922139,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0.108647371922008,0.31900115973192,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.530745387020035,0,4.44781693020933,0.741383633679017,0.730953646538188,0,0,0,0,0,0.242780379534093,0.394584402849391,0,0,0.063186579628488,25.7053047198782,0,0,0.330991955875499,0.313932918407225,0,0.569219092059585,0,0,0,0.174118413160805,0,0,0,0.146178634172371,0,0,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,3.77970767347522,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.494495150286999,0.471824806979294,0,0.338693328263138,0,0,0,0.275078873194468,0,0.2249738915515,0,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0.395223263795889,0.243585196761792,0.638341257770182,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,1.34833881285112,0.214441591374926,0,0.226705925512272,0,1.71315693154527,0,0,0,0,0,0.844712203265363,0,0,0.303859956177382,0,0.194860308839388,0.265729680626726,0.490696182767533,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0.550285795565037,0,0,0,0,0,0,0,0,0,0.295712172434091,0.0675375846183947,0,0,0.126831620387814,0,0,0,0.175871244359621,0.127762427639595,0,0,0.606965604236632,0.455324382702595,0,0.115233987555779,0,0,0,0,0,0,0.157115589916002,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.62041277132864,0,0.111855431797792,0.294450700845729,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0.301925687133347,1.00326405540328,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0.699588091474503,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.193766729508018,0,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0.162806537221949,0.106727345877715,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p4@IFIH1 | |||
}} |
Revision as of 06:20, 21 January 2014
Short description: | p4@IFIH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IFIH1_5end |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | -49bp_to_NM_022168, uc002uce.2, uc002ucf.2_5end |
EntrezGene: | IFIH1 |
HGNC: | 18873 |
UniProt: | Q9BYX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.50e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.50e-37 | 42 |
defensive cell | 1.59e-36 | 48 |
phagocyte | 1.59e-36 | 48 |
myeloid leukocyte | 1.30e-29 | 72 |
monopoietic cell | 1.25e-28 | 59 |
monocyte | 1.25e-28 | 59 |
monoblast | 1.25e-28 | 59 |
promonocyte | 1.25e-28 | 59 |
macrophage dendritic cell progenitor | 1.31e-27 | 61 |
myeloid lineage restricted progenitor cell | 2.51e-25 | 66 |
granulocyte monocyte progenitor cell | 6.54e-25 | 67 |
myeloid cell | 1.00e-18 | 108 |
common myeloid progenitor | 1.00e-18 | 108 |
eosinophil | 4.00e-16 | 2 |
leukocyte | 5.23e-16 | 136 |
nongranular leukocyte | 3.12e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.80e-14 | 120 |
hematopoietic cell | 5.24e-13 | 177 |
hematopoietic oligopotent progenitor cell | 5.47e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.47e-13 | 161 |
hematopoietic stem cell | 2.65e-12 | 168 |
blood cell | 9.70e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.19e-21 | 76 |
hematopoietic system | 6.37e-21 | 98 |
blood island | 6.37e-21 | 98 |
bone element | 7.22e-20 | 82 |
hemolymphoid system | 1.08e-18 | 108 |
skeletal element | 7.40e-18 | 90 |
immune system | 3.43e-17 | 93 |
skeletal system | 8.62e-16 | 100 |
musculoskeletal system | 1.60e-09 | 167 |
lateral plate mesoderm | 2.08e-08 | 203 |