FFCP PHASE1:Hg19::chr3:10334585..10334596,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51738 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18129 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UBU3 | |||
|association_with_transcript=4bp_to_ENST00000287656,ENST00000430179,ENST00000457360_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_GHRL_5end | |||
|id=chr3:10334585..10334596,- | |||
|ontology_enrichment_celltype=CL:0000037!1.39e-34!172;CL:0000566!1.39e-34!172;CL:0000988!8.67e-33!182;CL:0000763!1.71e-29!112;CL:0000049!1.71e-29!112;CL:0002032!9.48e-29!165;CL:0000837!9.48e-29!165;CL:0002057!4.40e-28!42;CL:0000738!1.07e-27!140;CL:0000860!1.31e-25!45;CL:0000766!2.01e-25!76;CL:0002087!1.76e-19!119;CL:0002009!6.30e-19!65;CL:0002194!3.00e-18!63;CL:0000576!3.00e-18!63;CL:0000040!3.00e-18!63;CL:0000559!3.00e-18!63;CL:0000557!1.43e-16!71;CL:0002031!3.39e-16!124;CL:0000094!1.42e-15!8;CL:0000839!1.45e-15!70;CL:0000081!8.10e-11!11;CL:0002393!2.19e-09!9;CL:0002397!2.19e-09!9;CL:0000134!1.57e-07!358;CL:0000775!2.11e-07!3;CL:0000784!2.20e-07!3;CL:0002320!4.46e-07!365;CL:0000945!9.23e-07!24;CL:0000826!9.23e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000094;5.78e-27;8!CL:0000775;1.74e-26;3!CL:0000784;2.06e-26;3!CL:0000081;1.37e-19;11!CL:0000771;1.73e-18;2!CL:0000451;1.37e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,5.79e-27,8;CL:0000775,1.74e-26,3;CL:0000784,2.07e-26,3;CL:0000081,1.37e-19,11;CL:0000771,1.73e-18,2;CL:0000037,6.74e-10,168;CL:0000988,2.98e-09,177;CL:0000763,4.74e-09,108;CL:0000049,4.74e-09,108;CL:0000738,4.05e-08,136;CL:0000766,4.90e-08,72;CL:0002032,1.15e-07,161;CL:0000837,1.15e-07,161;CL:0000451,1.37e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.08e-29!112;UBERON:0002390!8.74e-26!102;UBERON:0003061!8.74e-26!102;UBERON:0002405!1.50e-15!115;UBERON:0002371!6.93e-15!80;UBERON:0001474!3.18e-13!86;UBERON:0000178!7.06e-11!15;UBERON:0000179!7.06e-11!15;UBERON:0000463!7.06e-11!15;UBERON:0004765!5.52e-10!101;UBERON:0001434!5.52e-10!101;UBERON:0003081!1.82e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;7.82e-10;1!UBERON:0000178;6.05e-09;15!UBERON:0000179;6.05e-09;15!UBERON:0000463;6.05e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,8.17e-10,1;UBERON:0000178,5.93e-09,15;UBERON:0000179,5.93e-09,15;UBERON:0000463,5.93e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.0787107813136792,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0,0,0,0.587200878669695,1.10799081706375,0.401088894940283,0.651032612147555,0,0,0,0.145398238779565,0.755751887377619,0.485168122375632,0.697287110717054,0.411167888021826,0,0.28769239232215,0,0,0.344745680736619,0,0,0.941211697713023,0.272906150057846,0.674170453335254,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0,0.580418477257168,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0,0.633765858935825,1.06302149982522,0.419317291016752,0.44931452458598,1.05123824989054,0.48217676009124,0.285012743741249,0,0,0,1.09227722252426,0,0.426730222566507,0,0.574752439954483,1.98313461835459,0.954053754535364,0,0,0.382273228125229,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.96226560763355,12.0118931263827,3.34311751196608,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,21.0848667897701,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0.462985512576611,0.570762456703795,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,6.74106321552464,8.97484377612075,6.63064821497657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,1.01489521846434,0,1.13929437434833,1.90585420366231,0.411362273086194,0.648473311192717,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,2.48956981172077,1.2700414963433,0.973865820823666,0.842391534340376,0.228234679033192,0.313359791546046,0,0,0.1605880751037,0,0,1.71752672377882,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,2.48083010905975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.845855261818682,1.54698931136585,0,0,0,0,0.730336388246517,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0.124149428591716,0,0,0,0,0,0.471464371102113,0,0,0,0,0,0,0,0.122241444182866,0,0,1.20764276154616,0.961705476909699 | |||
|short_description=p2@GHRL | |||
}} |
Revision as of 17:19, 21 January 2014
Short description: | p2@GHRL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GHRL_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 4bp_to_ENST00000287656, ENST00000430179, ENST00000457360_5end |
EntrezGene: | GHRL |
HGNC: | 18129 |
UniProt: | Q9UBU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 5.79e-27 | 8 |
neutrophil | 1.74e-26 | 3 |
plasmacytoid dendritic cell | 2.07e-26 | 3 |
blood cell | 1.37e-19 | 11 |
eosinophil | 1.73e-18 | 2 |
hematopoietic stem cell | 6.74e-10 | 168 |
hematopoietic cell | 2.98e-09 | 177 |
myeloid cell | 4.74e-09 | 108 |
common myeloid progenitor | 4.74e-09 | 108 |
leukocyte | 4.05e-08 | 136 |
myeloid leukocyte | 4.90e-08 | 72 |
hematopoietic oligopotent progenitor cell | 1.15e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-07 | 161 |
dendritic cell | 1.37e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lymph node | 8.17e-10 | 1 |
blood | 5.93e-09 | 15 |
haemolymphatic fluid | 5.93e-09 | 15 |
organism substance | 5.93e-09 | 15 |