FFCP PHASE1:Hg19::chr3:37217736..37217753,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9209 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6703 | |||
|TSSclassifier=strong | |||
|UniProt=C9J0U5 | |||
|association_with_transcript=0bp_to_ENST00000438374_5end | |||
|description=CAGE_peak_2_at_LRRFIP2_5end | |||
|id=chr3:37217736..37217753,- | |||
|ontology_enrichment_celltype=CL:0002057!3.16e-19!42;CL:0000860!1.78e-18!45;CL:0000766!6.22e-14!76;CL:0000557!4.20e-13!71;CL:0002009!6.32e-13!65;CL:0002194!6.91e-12!63;CL:0000576!6.91e-12!63;CL:0000040!6.91e-12!63;CL:0000559!6.91e-12!63;CL:0000839!1.94e-11!70;CL:0000057!4.93e-10!75;CL:0002620!1.07e-09!23;CL:0000763!1.60e-08!112;CL:0000049!1.60e-08!112;CL:0002371!2.88e-08!591;CL:0000134!3.03e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.21e-19;33!CL:0002057;9.21e-19;33!CL:0000473;3.18e-13;39!CL:0000234;3.18e-13;39!CL:0002620;6.80e-10;23!CL:0000576;1.46e-08;48!CL:0000766;3.45e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.38e-19,42;CL:0002057,2.38e-19,42;CL:0000473,1.05e-16,48;CL:0000234,1.05e-16,48;CL:0000766,9.64e-14,72;CL:0000557,6.50e-13,67;CL:0002009,9.34e-13,61;CL:0002194,1.06e-11,59;CL:0000576,1.06e-11,59;CL:0000040,1.06e-11,59;CL:0000559,1.06e-11,59;CL:0000839,3.22e-11,66;CL:0000057,5.43e-10,76;CL:0002620,9.43e-10,23;CL:0000763,2.97e-08,108;CL:0000049,2.97e-08,108;CL:0000134,3.31e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;9.55e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!1.33e-12!101;UBERON:0001434!1.33e-12!101;UBERON:0002371!4.23e-12!80;UBERON:0001474!1.76e-11!86;UBERON:0002204!1.62e-10!167;UBERON:0003081!1.11e-09!216;UBERON:0002390!2.50e-09!102;UBERON:0003061!2.50e-09!102;UBERON:0000926!3.30e-09!448;UBERON:0004120!3.30e-09!448;UBERON:0006603!3.30e-09!448;UBERON:0002097!4.00e-09!40;UBERON:0000467!4.52e-09!625;UBERON:0000480!7.35e-09!626;UBERON:0003102!2.23e-08!95;UBERON:0002199!2.50e-08!45;UBERON:0002416!2.50e-08!45;UBERON:0002405!6.51e-08!115;UBERON:0002193!6.51e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;8.91e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.59e-12,76;UBERON:0001474,3.56e-11,82;UBERON:0003081,4.63e-11,203;UBERON:0001434,7.45e-11,100;UBERON:0004765,2.62e-10,90;UBERON:0000926,4.02e-10,315;UBERON:0004120,4.02e-10,315;UBERON:0006603,4.02e-10,315;UBERON:0003102,1.07e-09,99;UBERON:0002097,1.48e-09,41;UBERON:0002204,2.62e-09,167;UBERON:0002390,5.52e-09,98;UBERON:0003061,5.52e-09,98;UBERON:0002199,7.75e-09,46;UBERON:0002416,7.75e-09,46;UBERON:0002405,5.91e-08,93;UBERON:0002193,1.66e-07,108 | |||
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| |||
|short_description=p2@LRRFIP2 | |||
}} |
Revision as of 18:12, 21 January 2014
Short description: | p2@LRRFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRRFIP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000438374_5end |
EntrezGene: | LRRFIP2 |
HGNC: | 6703 |
UniProt: | C9J0U5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.38e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.38e-19 | 42 |
defensive cell | 1.05e-16 | 48 |
phagocyte | 1.05e-16 | 48 |
myeloid leukocyte | 9.64e-14 | 72 |
granulocyte monocyte progenitor cell | 6.50e-13 | 67 |
macrophage dendritic cell progenitor | 9.34e-13 | 61 |
monopoietic cell | 1.06e-11 | 59 |
monocyte | 1.06e-11 | 59 |
monoblast | 1.06e-11 | 59 |
promonocyte | 1.06e-11 | 59 |
myeloid lineage restricted progenitor cell | 3.22e-11 | 66 |
fibroblast | 5.43e-10 | 76 |
skin fibroblast | 9.43e-10 | 23 |
myeloid cell | 2.97e-08 | 108 |
common myeloid progenitor | 2.97e-08 | 108 |
mesenchymal cell | 3.31e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.59e-12 | 76 |
bone element | 3.56e-11 | 82 |
lateral plate mesoderm | 4.63e-11 | 203 |
skeletal system | 7.45e-11 | 100 |
skeletal element | 2.62e-10 | 90 |
mesoderm | 4.02e-10 | 315 |
mesoderm-derived structure | 4.02e-10 | 315 |
presumptive mesoderm | 4.02e-10 | 315 |
surface structure | 1.07e-09 | 99 |
skin of body | 1.48e-09 | 41 |
musculoskeletal system | 2.62e-09 | 167 |
hematopoietic system | 5.52e-09 | 98 |
blood island | 5.52e-09 | 98 |
integument | 7.75e-09 | 46 |
integumental system | 7.75e-09 | 46 |
immune system | 5.91e-08 | 93 |
hemolymphoid system | 1.66e-07 | 108 |