FFCP PHASE1:Hg19::chr3:52719888..52719908,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55193 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30064 | |||
|TSSclassifier=strong | |||
|UniProt=C9J409 | |||
|association_with_transcript=0bp_to_ENST00000458294_5end | |||
|description=CAGE_peak_2_at_PBRM1_5end | |||
|id=chr3:52719888..52719908,- | |||
|ontology_enrichment_celltype=CL:0000037!1.45e-13!172;CL:0000566!1.45e-13!172;CL:0000738!5.02e-13!140;CL:0000988!2.43e-11!182;CL:0002032!3.23e-11!165;CL:0000837!3.23e-11!165;CL:0002031!3.44e-09!124;CL:0002087!1.66e-07!119;CL:0000838!1.89e-07!52;CL:0000542!2.28e-07!53;CL:0000051!2.28e-07!53;CL:0000791!4.10e-07!18;CL:0000789!4.10e-07!18;CL:0002420!4.10e-07!18;CL:0002419!4.10e-07!18;CL:0000790!4.10e-07!18;CL:0000084!8.11e-07!25;CL:0000827!8.11e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.67e-07;18!CL:0000789;5.67e-07;18!CL:0002419;5.67e-07;18!CL:0000084;6.91e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.72e-14,168;CL:0000738,6.93e-14,136;CL:0000988,2.33e-12,177;CL:0002032,7.22e-12,161;CL:0000837,7.22e-12,161;CL:0002031,6.54e-10,120;CL:0002087,3.86e-08,115;CL:0000838,1.71e-07,52;CL:0000542,2.07e-07,53;CL:0000051,2.07e-07,53;CL:0000791,4.06e-07,18;CL:0000789,4.06e-07,18;CL:0002420,4.06e-07,18;CL:0002419,4.06e-07,18;CL:0000790,4.06e-07,18;CL:0000084,8.03e-07,25;CL:0000827,8.03e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;5.67e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-12!115;UBERON:0000073!3.69e-07!94;UBERON:0001016!3.69e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.72e-12,114;UBERON:0001016,1.34e-07,89 | |||
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| |||
|short_description=p2@PBRM1 | |||
}} |
Revision as of 19:12, 21 January 2014
Short description: | p2@PBRM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PBRM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000458294_5end |
EntrezGene: | PBRM1 |
HGNC: | 30064 |
UniProt: | C9J409 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.72e-14 | 168 |
leukocyte | 6.93e-14 | 136 |
hematopoietic cell | 2.33e-12 | 177 |
hematopoietic oligopotent progenitor cell | 7.22e-12 | 161 |
hematopoietic multipotent progenitor cell | 7.22e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 6.54e-10 | 120 |
nongranular leukocyte | 3.86e-08 | 115 |
lymphoid lineage restricted progenitor cell | 1.71e-07 | 52 |
lymphocyte | 2.07e-07 | 53 |
common lymphoid progenitor | 2.07e-07 | 53 |
mature alpha-beta T cell | 4.06e-07 | 18 |
alpha-beta T cell | 4.06e-07 | 18 |
immature T cell | 4.06e-07 | 18 |
mature T cell | 4.06e-07 | 18 |
immature alpha-beta T cell | 4.06e-07 | 18 |
T cell | 8.03e-07 | 25 |
pro-T cell | 8.03e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.72e-12 | 114 |
nervous system | 1.34e-07 | 89 |