FFCP PHASE1:Hg19::chr3:154798129..154798155,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4311 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |||
|TSSclassifier=strong | |||
|UniProt=P08473 | |||
|association_with_transcript=-32bp_to_ENST00000360490_5end | |||
|coexpression_cluster_id=C1513 | |||
|description=CAGE_peak_5_at_MME_5end | |||
|id=chr3:154798129..154798155,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.46e-15!180;CL:0000057!4.56e-10!75;CL:0000136!6.15e-09!15;CL:0002620!1.36e-07!23;CL:0000680!1.90e-07!57;CL:0000056!1.90e-07!57;CL:0000355!1.90e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.92e-09;13!CL:0002620;7.29e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.37e-10,15;CL:0000057,6.22e-10,76;CL:0002620,8.45e-08,23;CL:0000680,2.27e-07,58;CL:0000056,2.27e-07,58;CL:0000355,2.27e-07,58;CL:0000048,2.27e-07,427;CL:0000034,4.29e-07,441;CL:0000723,5.22e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.81e-10!83;UBERON:0002329!4.81e-10!83;UBERON:0003077!4.81e-10!83;UBERON:0003059!4.81e-10!83;UBERON:0007282!4.81e-10!83;UBERON:0009618!4.81e-10!83;UBERON:0007285!4.81e-10!83;UBERON:0004290!1.28e-09!70;UBERON:0003102!1.87e-08!95;UBERON:0000486!4.37e-08!82;UBERON:0002385!1.32e-07!63;UBERON:0001015!1.32e-07!63;UBERON:0000383!1.32e-07!63;UBERON:0001134!1.59e-07!61;UBERON:0002036!1.59e-07!61;UBERON:0003082!1.59e-07!61;UBERON:0002100!3.77e-07!216;UBERON:0005256!4.25e-07!143;UBERON:0002199!5.78e-07!45;UBERON:0002416!5.78e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;7.10e-08;31!UBERON:0001015;7.10e-08;31!UBERON:0000383;7.10e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.98e-09,71;UBERON:0003059,1.98e-09,71;UBERON:0007282,1.98e-09,71;UBERON:0004290,1.98e-09,71;UBERON:0009618,1.98e-09,71;UBERON:0007524,2.02e-09,73;UBERON:0003077,4.01e-09,72;UBERON:0007285,4.01e-09,72;UBERON:0002199,1.77e-08,46;UBERON:0002416,1.77e-08,46;UBERON:0002097,1.39e-07,41;UBERON:0000486,1.70e-07,83;UBERON:0007503,1.72e-07,78;UBERON:0002385,4.46e-07,64;UBERON:0001015,4.46e-07,64;UBERON:0000383,4.46e-07,64;UBERON:0001134,7.81e-07,62;UBERON:0002036,7.81e-07,62;UBERON:0003082,7.81e-07,62 | |||
|phase1_expression=22.8914757880901,56.9507393550015,5.3562673556469,10.007329835313,4.46961094427288,0.872338524100369,53.1929744153452,8.2123583545488,10.9697963843932,0,0,3.71350332621293,0.791300934685361,0.866364470720326,0.331397375727916,3.36162573225888,2.41077811209591,1.46062018077475,1.46379839637152,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,9.14112966847559,6.96629239188365,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0.727752183563449,0,0,0,0.28769239232215,0,0.47296445977717,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0.329851300186716,0,0.852449501065388,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,6.60856642895129,0,3.16060901730092,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24930726552346,0.947109008176067,0,0,0,0,0,0.670700859703636,1.15076305659177,0,0,0.434539556882471,0,0,0.472674085820339,0,0,4.91171533116422,0,0,0.324547393654683,0.174129737299267,0,0.238490624305342,0,0.371457501329565,0,0,0,0.56530794192401,0,0,0,0,0.35576626268671,0.66944122552934,0,0,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0.183201743930407,13.1780417436063,38.7780264148325,0,0,0.25326102332916,5.03154887090231,1.14734648299525,0,0,0,0,2.48968828319813,2.69421344139376,2.7788523529288,0,1.15235184896,3.51482147750695,9.67696238173994,2.85235910772225,7.02408798593465,8.92502189692613,2.91371299862637,3.37081936085396,2.44985005505872,2.57952066354713,1.23990937410919,10.6920257155385,4.45080472701402,0.910161361938026,0,5.05008341862199,2.12701483782339,4.98715407871529,0.877955241761676,0.30648779579902,4.20666564938471,0.453728732640084,1.79389635688862,18.5794928272154,16.1068244881267,0.300091096084402,2.67936576019941,13.6549486224183,7.81690796592677,5.56961896396179,6.04109431999431,1.00973509697646,9.20498986422994,0.646584227275248,1.42003837006646,0.906768884048762,1.01736355386293,0.386521706326594,0.545492241181669,0.286804595389004,1.46368447355514,0.795178609928912,0.813357600086629,0.310983165046111,0,1.45990943630332,9.38697193978896,1.92972281457866,0,16.2528774811193,10.1063127433742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97316789473185,0.860919069801795,6.17644117074692,0,0,0,1.20364978706088,4.56131627434455,0,0,0,0.469634776943287,0,0,0,0,0,0.246217006087397,0,0,0,0.335964256397719,0,0.53735113621709,0.871901815541886,0,0,0,0,0,0.12624243342638,8.0007346808133,7.25778008560728,0,1.71072446022705,1.23392991243988,33.0377363628309,1.71495859578347,0,0,0,9.43683525031778,0,0.845302752556,5.31876233169741,3.12022310734098,0.771622122786426,0,0.532844358032199,8.57867961948885,76.5096463601935,21.4042487563,2.60588947434988,7.81862287233601,35.6378342820043,0,0,0,0,0,0,0,0,0,7.09428402671138,2.26023954805422,21.6663765520274,0,0,0,0,0.254094624222463,0,0,0,0,63.6655970355105,44.8742188806037,85.3695957678233,0.858840442033979,0,1.35632511849868,0.415941723061614,0.178428988797162,0.946214490203608,0.468565659970853,7.82459859292069,4.5481500811197,2.0694614258501,0,0.921845842708516,60.2103448263814,0,0,0,0.862856803274467,0,4.85004114314015,0,3.62868351995616,20.8410558567773,27.7766171651393,22.733467649079,3.97231362692673,18.4214609664013,0,0,0.771048469013278,0.532685175939381,1.97105174433142,1.03850885836724,0.929683027679674,0.241718899183244,1.60405176242628,0.828728900423067,1.95184561879831,0.728364672026868,5.50722542829581,1.35359883872224,6.2382423054576,0,0,1.05551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,1.31205858279882,5.20605431462885,4.32772248920434,2.1060976908219,2.55779449753823,1.72279661398852,1.95018073810956,0,4.15684088656124,5.69979883324184,8.13569476048487,7.58101148664918,64.3447266760959,32.4837394367872,4.85791776271775,2.67096106940212,0,0.192190067365106,0.255225424989168,0.10115778085555,1.39453664789186,16.3702420351933,0.6970372701606,0.616067160352178,1.06461206063404,0.869932992075073,0.37064843820784,0,3.72158369359667,3.79655309662471,7.81583795087682,0.511795582622668,6.41908482050881,0,0,25.1821440616641,8.23611089208164,4.24124648444471,0.808729926293264,0,0,0.48763373908959,3.41198885483798,1.05650146756755,3.13949796238367,6.50464986987079,0,0,0.66343897524122,0,1.15755106853338,3.9353685122798,0,1.239293992399,0,91.926676762797,213.200418998473,0.35667105148125,3.19284957663538,0.211107635297664,0,0.379473173765715,1.74967360122491,0.288666338176536,0,0,4.70719003883896,0,0,0,0,15.7308758861972,7.64637207142375,17.659062802399,7.86164859010704,8.63860773481008,18.8057260245888,11.8806916192385,8.72437693923697,31.7267491248595,0,0.245040215981032,0,47.031763430321,1.9919716137556,0,0,0.191505370132367,0,0,0,0,0,0,6.43308755646092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80921266106924,17.8399966971785,0,0,10.7435018131961,2.37571744666111,6.45037474408387,0,0,13.5796620127945,0,0,0.398495976502139,0.828851746593443,0.251932747854276,0,0,0,0.359473404589307,0,0,0.789147245095469,4.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| |||
|short_description=p5@MME | |||
}} |
Revision as of 22:10, 21 January 2014
Short description: | p5@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MME_5end |
Coexpression cluster: | C1513_Smooth_Neutrophils_Eosinophils_Pancreatic_Mesenchymal_Skeletal_mesenchymal |
Association with transcript: | -32bp_to_ENST00000360490_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | P08473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.37e-10 | 15 |
fibroblast | 6.22e-10 | 76 |
skin fibroblast | 8.45e-08 | 23 |
muscle precursor cell | 2.27e-07 | 58 |
myoblast | 2.27e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.27e-07 | 58 |
multi fate stem cell | 2.27e-07 | 427 |
stem cell | 4.29e-07 | 441 |
somatic stem cell | 5.22e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
somite | 1.98e-09 | 71 |
presomitic mesoderm | 1.98e-09 | 71 |
presumptive segmental plate | 1.98e-09 | 71 |
dermomyotome | 1.98e-09 | 71 |
trunk paraxial mesoderm | 1.98e-09 | 71 |
dense mesenchyme tissue | 2.02e-09 | 73 |
paraxial mesoderm | 4.01e-09 | 72 |
presumptive paraxial mesoderm | 4.01e-09 | 72 |
integument | 1.77e-08 | 46 |
integumental system | 1.77e-08 | 46 |
skin of body | 1.39e-07 | 41 |
multilaminar epithelium | 1.70e-07 | 83 |
epithelial vesicle | 1.72e-07 | 78 |
muscle tissue | 4.46e-07 | 64 |
musculature | 4.46e-07 | 64 |
musculature of body | 4.46e-07 | 64 |
skeletal muscle tissue | 7.81e-07 | 62 |
striated muscle tissue | 7.81e-07 | 62 |
myotome | 7.81e-07 | 62 |