FFCP PHASE1:Hg19::chr3:194214918..194214921,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr3:194214918..194214921,+ | |||
|id=chr3:194214918..194214921,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.88e-71!42;CL:0000860!5.05e-66!45;CL:0002194!9.32e-45!63;CL:0000576!9.32e-45!63;CL:0000040!9.32e-45!63;CL:0000559!9.32e-45!63;CL:0002009!3.13e-43!65;CL:0000839!8.65e-40!70;CL:0000766!2.00e-39!76;CL:0000557!3.69e-39!71;CL:0000763!5.16e-25!112;CL:0000049!5.16e-25!112;CL:0002087!3.05e-21!119;CL:0002031!3.62e-20!124;CL:0000738!6.80e-19!140;CL:0002032!3.53e-15!165;CL:0000837!3.53e-15!165;CL:0000037!2.48e-14!172;CL:0000566!2.48e-14!172;CL:0000988!3.10e-13!182;CL:0002593!3.16e-11!2;CL:0000048!3.27e-08!430;CL:0000723!5.36e-08!436;CL:0000034!1.01e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.47e-64;33!CL:0002057;9.47e-64;33!CL:0000473;6.03e-45;39!CL:0000234;6.03e-45;39!CL:0000576;1.28e-29;48!CL:0000766;1.48e-19;69!CL:0002087;1.96e-11;104!CL:0000763;1.51e-10;100!CL:0002593;2.57e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.13e-55,42;CL:0002057,1.13e-55,42;CL:0000473,1.37e-48,48;CL:0000234,1.37e-48,48;CL:0002194,1.15e-38,59;CL:0000576,1.15e-38,59;CL:0000040,1.15e-38,59;CL:0000559,1.15e-38,59;CL:0002009,2.20e-37,61;CL:0000839,1.63e-34,66;CL:0000557,5.44e-34,67;CL:0000766,1.38e-31,72;CL:0000763,9.04e-21,108;CL:0000049,9.04e-21,108;CL:0002087,1.92e-19,115;CL:0002031,1.37e-18,120;CL:0000738,2.86e-16,136;CL:0002032,1.47e-13,161;CL:0000837,1.47e-13,161;CL:0000037,6.11e-13,168;CL:0000988,3.22e-12,177;CL:0002593,3.08e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-38;42!CL:0000049;1.43e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.50e-34!80;UBERON:0001474!1.95e-31!86;UBERON:0004765!5.53e-26!101;UBERON:0001434!5.53e-26!101;UBERON:0002390!1.12e-25!102;UBERON:0003061!1.12e-25!102;UBERON:0002204!1.60e-24!167;UBERON:0002405!3.35e-24!115;UBERON:0002193!6.60e-23!112;UBERON:0003081!2.17e-20!216;UBERON:0002456!3.16e-11!2;UBERON:0001637!4.43e-08!42;UBERON:0003509!4.43e-08!42;UBERON:0004572!4.43e-08!42;UBERON:0000926!6.88e-07!448;UBERON:0004120!6.88e-07!448;UBERON:0006603!6.88e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;2.57e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.89e-30,76;UBERON:0001474,1.20e-27,82;UBERON:0004765,4.10e-25,90;UBERON:0002405,2.83e-24,93;UBERON:0002390,5.46e-23,98;UBERON:0003061,5.46e-23,98;UBERON:0001434,1.64e-22,100;UBERON:0002193,9.04e-21,108;UBERON:0002204,2.91e-15,167;UBERON:0003081,2.49e-12,203;UBERON:0002456,3.08e-08,2;UBERON:0000926,1.94e-07,315;UBERON:0004120,1.94e-07,315;UBERON:0006603,1.94e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0.232429036905685,0.411167888021826,0.929119112685311,0.575384784644301,0.512321413058201,0.709446689665756,2.06847408441971,1.29096936716765,1.35426486594342,0,0.272906150057846,0.224723484445085,2.44867113896722,2.24650318953266,0.639337125799041,0,0,0,5.5139755339431,3.97169657283798,6.22822248995575,0.75374599577023,1.5644487552606,1.08594422352558,1.21079900526674,2.20966581592539,2.84816148696796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0.487426979262569,1.05650146756755,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:194214918..194214921,+ | |||
}} |
Revision as of 23:25, 21 January 2014
Short description: | p@chr3:194214918..194214921, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:194214918..194214921, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.13e-55 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-55 | 42 |
defensive cell | 1.37e-48 | 48 |
phagocyte | 1.37e-48 | 48 |
monopoietic cell | 1.15e-38 | 59 |
monocyte | 1.15e-38 | 59 |
monoblast | 1.15e-38 | 59 |
promonocyte | 1.15e-38 | 59 |
macrophage dendritic cell progenitor | 2.20e-37 | 61 |
myeloid lineage restricted progenitor cell | 1.63e-34 | 66 |
granulocyte monocyte progenitor cell | 5.44e-34 | 67 |
myeloid leukocyte | 1.38e-31 | 72 |
myeloid cell | 9.04e-21 | 108 |
common myeloid progenitor | 9.04e-21 | 108 |
nongranular leukocyte | 1.92e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.37e-18 | 120 |
leukocyte | 2.86e-16 | 136 |
hematopoietic oligopotent progenitor cell | 1.47e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-13 | 161 |
hematopoietic stem cell | 6.11e-13 | 168 |
hematopoietic cell | 3.22e-12 | 177 |
smooth muscle cell of the internal thoracic artery | 3.08e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.89e-30 | 76 |
bone element | 1.20e-27 | 82 |
skeletal element | 4.10e-25 | 90 |
immune system | 2.83e-24 | 93 |
hematopoietic system | 5.46e-23 | 98 |
blood island | 5.46e-23 | 98 |
skeletal system | 1.64e-22 | 100 |
hemolymphoid system | 9.04e-21 | 108 |
musculoskeletal system | 2.91e-15 | 167 |
lateral plate mesoderm | 2.49e-12 | 203 |
internal thoracic artery | 3.08e-08 | 2 |
mesoderm | 1.94e-07 | 315 |
mesoderm-derived structure | 1.94e-07 | 315 |
presumptive mesoderm | 1.94e-07 | 315 |