FFCP PHASE1:Hg19::chr4:90412098..90412104,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:90412098..90412104,+ | |||
|id=chr4:90412098..90412104,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.01e-23!24;CL:0000115!1.36e-15!35;CL:0000071!2.36e-15!18;CL:0002546!2.36e-15!18;CL:0002078!2.80e-12!44;CL:0002543!1.87e-10!6;CL:0005020!4.49e-10!6;CL:0002138!4.49e-10!6;CL:0005022!4.49e-10!6;CL:0000213!6.88e-09!57;CL:0000215!6.88e-09!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.80e-45;24!CL:0000115;1.37e-25;36!CL:0000071;1.94e-25;18!CL:0002543;6.33e-25;6!CL:0002138;5.24e-24;6!CL:0002618;1.99e-19;3!CL:0002078;1.96e-16;45!CL:0000213;6.33e-14;58!CL:0000215;6.33e-14;58!CL:0002545;1.59e-12;2!CL:0002544;2.00e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.32e-45,24;CL:0000115,1.17e-33,36;CL:0002078,2.63e-26,45;CL:0000071,1.60e-25,18;CL:0002546,1.60e-25,18;CL:0002543,4.95e-25,6;CL:0005020,5.51e-24,6;CL:0002138,5.51e-24,6;CL:0005022,5.51e-24,6;CL:0000213,1.03e-19,58;CL:0000215,1.03e-19,58;CL:0002618,1.88e-19,3;CL:0002545,1.45e-12,2;CL:0002544,1.89e-09,6;CL:0000222,4.23e-09,121 | |||
|ontology_enrichment_development_v019=CL:0002546;1.94e-25;18!CL:0005022;5.24e-24;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;4.01e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.96e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0001986!2.36e-15!18;UBERON:0004638!2.36e-15!18;UBERON:0004852!2.36e-15!18;UBERON:0000487!9.16e-12!22;UBERON:0006914!7.55e-10!25;UBERON:0001007!5.17e-08!155;UBERON:0001555!5.17e-08!155;UBERON:0007026!5.17e-08!155;UBERON:0004921!5.55e-08!129;UBERON:0004185!5.55e-08!129;UBERON:0003101!6.68e-08!22;UBERON:0000079!6.68e-08!22;UBERON:0002465!1.35e-07!10;UBERON:0001473!2.92e-07!8;UBERON:0004536!2.92e-07!8;UBERON:0006558!2.92e-07!8;UBERON:0001737!3.44e-07!9;UBERON:0004119!7.53e-07!169;UBERON:0000925!7.53e-07!169;UBERON:0006595!7.53e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.94e-25;18!UBERON:0001986;1.94e-25;18!UBERON:0004852;1.94e-25;18!UBERON:0000487;1.51e-20;22!UBERON:0002465;2.07e-20;10!UBERON:0001473;5.61e-18;8!UBERON:0004536;5.61e-18;8!UBERON:0006558;5.61e-18;8!UBERON:0006914;6.64e-18;25!UBERON:0001638;1.45e-16;9!UBERON:0003920;1.45e-16;9!UBERON:0004582;1.45e-16;9!UBERON:0005800;1.59e-12;2!UBERON:0001515;1.59e-12;2!UBERON:0000490;5.42e-12;33!UBERON:0002066;7.29e-12;5!UBERON:0000055;1.06e-08;65!UBERON:0000996;2.37e-07;1!UBERON:0002405;3.14e-07;27!UBERON:0000029;3.31e-07;1!UBERON:0010260;8.90e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.60e-25,18;UBERON:0001986,1.60e-25,18;UBERON:0004852,1.60e-25,18;UBERON:0000487,1.30e-20,22;UBERON:0002465,2.11e-20,10;UBERON:0006914,5.81e-18,25;UBERON:0001473,5.82e-18,8;UBERON:0004536,5.82e-18,8;UBERON:0006558,5.82e-18,8;UBERON:0001638,1.23e-16,9;UBERON:0003920,1.23e-16,9;UBERON:0004582,1.23e-16,9;UBERON:0000055,3.63e-14,68;UBERON:0005800,1.45e-12,2;UBERON:0001515,1.45e-12,2;UBERON:0002049,5.46e-12,78;UBERON:0007798,5.46e-12,78;UBERON:0002066,7.04e-12,5;UBERON:0004535,4.10e-09,109;UBERON:0001009,8.65e-09,112;UBERON:0000996,2.23e-07,1;UBERON:0000029,3.21e-07,1;UBERON:0010260,8.73e-07,9;UBERON:0007500,9.21e-07,59;UBERON:0001981,9.21e-07,59;UBERON:0004537,9.21e-07,59;UBERON:0006965,9.21e-07,59 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35762335895883,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,6.21838736116411,0.838998872419812,0,0.626984899610432,1.55050055501597,3.20189636418039,3.68192674041137,0,6.0821768457481,0.24406205754817,2.20597848207521,1.62028389576352,7.32257771929454,9.87929239555147,7.65758067286591,1.53316637465883,1.89853131913626,0.549605231791222,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0,0,0,0,0,0,0,0.816616685019573,0,0.516628905878827,0,0,0,0,0,0.125118519871964,0.831192346452549,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397589304964456,0,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0.473227200159376,0.337169380156203,0.723033089650446,0.55146986366197,0.435758888184812,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,1.58803092537181,0.462985512576611,1.33177906564219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,1.60740227430449,0,0.131124414959424,0,0,0,0,0,0,1.36074964221213,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.589062011728432,0,0,0,0,0,0,0.136499911407986,1.55545975149084,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,13.8483999902083,0,0,14.4876399560722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,1.1279783030859,0.980312671588698,1.1747511088309,7.02088811079485,0,0,0,0.141353071433941,0,0,0.0884575645033392,0.611030144933625,3.26173241548684,0.494255755786011,0,0,0,0,0,0,0,0,0,0,0,16.2349292967652,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0.17472666824203,0,4.45079123929792,2.77739404927505,2.46346371159628,0.193978032976839,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0.525774708558629,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,2.85439696392771,0,0,0,0,0.550157746388935,0.415440338029185,0,0,0,0,0,0.0524545881349981,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,2.48083010905975,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0.261906694481422,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.460935950223117,0.171488009437418,0,0,0,0.111231401892069,0.156986185701028,0,0.560544326627578,0,0,0,0.0714765441766563,0.316027223465453,3.25475991030751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0.218531143927391,0,0.407955318967927,0,0.0918948995348449,0.752122617877125,5.0013940824038,4.28742608249886,0,0,0,0.23806443146374,0,0,0,0.190941474834495,0,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,3.32878387092756,0,0 | |||
|short_description=p@chr4:90412098..90412104,+ | |||
}} |
Revision as of 02:15, 22 January 2014
Short description: | p@chr4:90412098..90412104, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:90412098..90412104, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.32e-45 | 24 |
endothelial cell | 1.17e-33 | 36 |
meso-epithelial cell | 2.63e-26 | 45 |
blood vessel endothelial cell | 1.60e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.60e-25 | 18 |
vein endothelial cell | 4.95e-25 | 6 |
lymphangioblast | 5.51e-24 | 6 |
endothelial cell of lymphatic vessel | 5.51e-24 | 6 |
vascular lymphangioblast | 5.51e-24 | 6 |
lining cell | 1.03e-19 | 58 |
barrier cell | 1.03e-19 | 58 |
endothelial cell of umbilical vein | 1.88e-19 | 3 |
thoracic aorta endothelial cell | 1.45e-12 | 2 |
aortic endothelial cell | 1.89e-09 | 6 |
mesodermal cell | 4.23e-09 | 121 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.60e-25 | 18 |
endothelium | 1.60e-25 | 18 |
cardiovascular system endothelium | 1.60e-25 | 18 |
simple squamous epithelium | 1.30e-20 | 22 |
lymphoid system | 2.11e-20 | 10 |
squamous epithelium | 5.81e-18 | 25 |
lymphatic vessel | 5.82e-18 | 8 |
lymph vasculature | 5.82e-18 | 8 |
lymphatic part of lymphoid system | 5.82e-18 | 8 |
vein | 1.23e-16 | 9 |
venous blood vessel | 1.23e-16 | 9 |
venous system | 1.23e-16 | 9 |
vessel | 3.63e-14 | 68 |
segment of aorta | 1.45e-12 | 2 |
thoracic aorta | 1.45e-12 | 2 |
vasculature | 5.46e-12 | 78 |
vascular system | 5.46e-12 | 78 |
umbilical vein | 7.04e-12 | 5 |
cardiovascular system | 4.10e-09 | 109 |
circulatory system | 8.65e-09 | 112 |
vagina | 2.23e-07 | 1 |
lymph node | 3.21e-07 | 1 |
umbilical blood vessel | 8.73e-07 | 9 |
epithelial tube open at both ends | 9.21e-07 | 59 |
blood vessel | 9.21e-07 | 59 |
blood vasculature | 9.21e-07 | 59 |
vascular cord | 9.21e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.96e-07 | 8 |