FFCP PHASE1:Hg19::chr5:56469939..56469950,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65056 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29520 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000506184_5end | |||
|description=CAGE_peak_4_at_GPBP1_5end | |||
|id=chr5:56469939..56469950,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.29e-23!140;CL:0000037!1.17e-17!172;CL:0000566!1.17e-17!172;CL:0002031!3.19e-16!124;CL:0002087!6.25e-16!119;CL:0000988!8.74e-16!182;CL:0002032!1.15e-15!165;CL:0000837!1.15e-15!165;CL:0002057!2.21e-13!42;CL:0000860!1.36e-12!45;CL:0000766!2.76e-12!76;CL:0000557!4.61e-10!71;CL:0000839!2.13e-09!70;CL:0000763!1.40e-08!112;CL:0000049!1.40e-08!112;CL:0002194!3.66e-08!63;CL:0000576!3.66e-08!63;CL:0000040!3.66e-08!63;CL:0000559!3.66e-08!63;CL:0002009!3.68e-08!65;CL:0000542!8.54e-08!53;CL:0000051!8.54e-08!53;CL:0000838!1.68e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.03e-20;33!CL:0002057;1.03e-20;33!CL:0000473;1.30e-13;39!CL:0000234;1.30e-13;39!CL:0000766;2.27e-10;69!CL:0000576;2.71e-10;48!CL:0000094;1.56e-08;8!CL:0000081;1.04e-07;11!CL:0002087;2.82e-07;104!CL:0000453;7.22e-07;5!CL:0000623;9.73e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.68e-31,136;CL:0000037,1.56e-24,168;CL:0000988,2.00e-23,177;CL:0000766,5.70e-22,72;CL:0002032,6.08e-22,161;CL:0000837,6.08e-22,161;CL:0002031,5.44e-20,120;CL:0000860,5.91e-20,42;CL:0002057,5.91e-20,42;CL:0000557,8.37e-18,67;CL:0000763,2.83e-17,108;CL:0000049,2.83e-17,108;CL:0002087,6.75e-17,115;CL:0000473,1.72e-16,48;CL:0000234,1.72e-16,48;CL:0000839,1.92e-15,66;CL:0002009,1.20e-13,61;CL:0002194,5.77e-13,59;CL:0000576,5.77e-13,59;CL:0000040,5.77e-13,59;CL:0000559,5.77e-13,59;CL:0000094,1.48e-08,8;CL:0000081,6.69e-08,11;CL:0000453,6.48e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.77e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.95e-11!102;UBERON:0003061!7.95e-11!102;UBERON:0002371!7.55e-09!80;UBERON:0001474!8.24e-09!86;UBERON:0002193!4.58e-08!112;UBERON:0004765!7.92e-07!101;UBERON:0001434!7.92e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.01e-15,98;UBERON:0003061,1.01e-15,98;UBERON:0002371,1.11e-15,76;UBERON:0001474,7.43e-15,82;UBERON:0002193,2.92e-13,108;UBERON:0002405,4.82e-13,93;UBERON:0004765,1.08e-12,90;UBERON:0001434,1.66e-10,100 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.684372125364421,0.87879847716362,0.840547463227464,0.738905305049512,1.10195093839151,0.786728553697808,2.68680578668049,1.23852898652861,0,0,0,1.00707360754392,0.284338464974843,1.17440175733939,1.10799081706375,0.802177789880567,1.73608696572681,0.671746422719773,0.32389366601898,0.257575567634187,0.581592955118259,0.377875943688809,0.970336244751265,1.39457422143411,1.23350366406548,1.23882548358041,2.8769239232215,1.2808035326455,3.07426898855161,1.37898272294647,1.93645405075148,4.06279459783025,1.31769637679823,0.545812300115692,2.02251136000576,3.06083892370903,3.20929027076094,3.19668562899521,0.989553900560148,1.39624560335142,0.426224750532694,2.03146467040009,1.13477044938228,4.35975574296902,2.00998932205395,1.5644487552606,0.868755378820466,3.63239701580021,2.57794345191295,2.53169909952708,0.211255286311942,0.212604299965044,0,0.22465726229299,0.750884464207532,0.32145117339416,0.570025487482497,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0.853460445133014,0.800791974072025,0,0.661044872784862,0,1.70763890732835,2.93618594685469,1.52909291250092,2.64342657158052,1.12101712596307,0,3.73748563216283,0.786021525498329,2.05601498999509,0.167186495390678,1.30368906653436,0.473447805734733,0,0.334231370655521,0.883817722424512,1.32920336750173,0.812411591295047,0.128091319725675,0.520237390239513,0.164437904603676,0,0.289803085735052,0.444859689486181,1.07016331235885,0,0.453237370790265,1.53288197440768,0.68725489096526,0.759059076058509,0.637130828648193,1.30216690771284,0.950452044448374,0.451725357233318,0.76791966692651,0,0.947109008176067,0,3.22570789159572,1.33720097891754,1.30341963494519,0,0,0.255725123687061,0,1.00267582127178,0.289693037921647,0.795285947051099,0.486634870302636,0.0945348171640679,0.443458794925128,0.614843499851882,0.589405839739707,0,0,0.324547393654683,0,0.26591592103773,2.38490624305342,5.14795419702115,0.371457501329565,0.39752481473341,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0.732186172644509,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,6.58902087180316,7.75560528296651,0,0,0.379891534993739,0.529636723252875,0.286836620748814,0.354668382198357,0,0,0,0.622422070799533,0.404132016209064,0.163461903113459,0,0,0,0,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0.375355559615893,0.277064115484183,0,0.30648779579902,0.600952235626387,0.567160915800105,0,0.213557388818567,0.423863802319124,0,0.103052529238439,0,0.37223371266318,0.168776332241266,0,0.504867548488229,0.644349290496095,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0.365921118388786,0.265059536642971,0.580969714347592,0.414644220061482,1.00928340350251,0,0,1.28648187638577,0,0,0,0.236613600079688,0,0.723033089650446,0.110293972732394,0,0.237270619111097,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0,0,2.53510069643662,0,0.590789906681404,1.32438929824395,0.368965315629341,0,0.109750285408626,0,0.100528972411631,0.277765335475589,0,0,0,0,0.352226082707465,0.288732895522148,0,0,0,0,0,0.702012795417713,0.148631162288728,0,0.16798212819886,0,0.179117045405697,0,0.383382679165211,1.47798971368783,0.352193736052904,1.03664057770386,2.01767934783746,2.5248486685276,0.126995788584338,0,0,0,0.411309970813294,0,0.285826432630578,0,0,0.22001485746285,0,0,0,0.797814349754612,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0.301439377059586,0,0.699810938274399,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.358121926479791,0,3.15249216323084,2.58753089831421,3.20857590699371,1.01637849688985,0,2.31986643833309,0.837581326671744,1.27587750330633,4.49404214368309,0,6.63064821497657,0.36807447515742,0,0,0.415941723061614,0.535286966391485,0.315404830067869,0.35142424497814,0,0,0,0,0,0.173767228936166,0.195801157462741,0,0.413536052245775,0.862856803274467,1.70764092485511,0.606255142892519,0,0,0,0.153461973288062,0.280660094433074,0.512556597022804,0,0.482561763430822,0,0.308419387605311,0,0.0821271560138091,0,0,1.20859449591622,0.200506470303285,0.184161977871793,0.34444334449382,0.182091168006717,0,0,0.539107359730903,0,0,0,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0.223874754722178,0.657779629937804,0,0.256450125116389,0.328014645699706,0,0.618246069886334,0.0915694648183434,0.495056999523528,0,0,0,0.193341436584244,0,0,0,0.214840489736547,0.145016693914229,0.340906509664404,0.178064071293475,0.165284915360978,0,0.893288987462089,0.708104465988849,0.464845549297286,0,0,1.54016790088044,0,0.869932992075073,0,0,0,0.316379424718726,0,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.573645408816206,0.491245205065606,0,0,0.844430541190656,0,0.379473173765715,0,0,0,0,0.564862804660675,0,0,0,0.918893600827838,1.01489521846434,0,0.569647187174163,1.19115887728894,0.411362273086194,0,0.540031437238115,0.79312517629427,0.534120355637366,2.88743956579008,0.735120647943095,0.929015875628594,0.721346064882224,0.853702120180969,0.159426272728822,0,0.383010740264733,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,0,0.1605880751037,0.403599414382095,0.425846237690326,0,0.307240764308458,0.223676107892416,0.667396566847634,0,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0,0.439524537815682,0,1.00299045849731,0.284136146806413,0.95497793895076,0.593929361665277,0.614321404198464,0,0.562677665642051,0.222617410045812,0.16480387422676,0.844501632511974,0.19924798825107,0.552567831062295,0,0.306806047506464,0.369254416383208,0.622079175323615,0.539210106883961,1.07412704805365,1.02314474045374,0.493217028184668,0,0,0,0.463840490809256,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0,0.236387681767936,0,0.583209226766509,0.347249989866585,0,0.723578631752448,0,1.10579259931225,0.591095237907095,1.09692698576986,0.435753854075961,0.557694977114413,0.384751292518985,0.227884111694002,0.23056390438806,0.538545866458633,0.217294743844016,0.31900115973192,0.366390373607449,0.533034776018635,0,0.470940769185074,0.498635045700469,0,0,0.503464760927528,0,0.635746315921515,0.210998064528027,0.326465616318295,1.13082457147153,0,0,0.442287822516696,1.83309043480088,1.77912677208373,0.617819694732514,0.208843899010911,0.606610196826093,0,0.468528891450678,0.364909578431332,0.19566461893209,0.728341138602278,0,1.20990716048664,0,0.821425535170343,2.25485129121739,0.72581733978073,0,0,0,0,0.569219092059585,0.277349346026277,0.173559738335131,0.685946781900644,0.69647365264322,0.34945333648406,0.171986032471617,0.290268993867255,0.219267951258557,0.328461828212837,0.484945082442097,1.1473296469895,0.225980740780532,0.274083849293502,0,1.13959432720582,1.95551382734803,0.320635281006135,0.213452994739353,0.799238438328521,1.00863292007874,0.343609788497747,0,0.14405479798815,0.49701014226173,0.707082103850386,0.271808412147228,0.313808538937,0.305994652908965,0,0.600420288709789,0.547621515567972,1.27746588066972,0,0.525774708558629,1.11712960508902,0.229160424011684,0.717873024576814,0.199679000498991,0,0.446342914883745,0.403100834920358,0.360299883542404,0,0.86661500537946,0.164831716762333,0.606631894687664,0.492137407573744,0.169346664131569,0.795229689809303,0.544813624446302,0,0,0,6.29926896344201,0,0.789744236554321,0.335434687599266,0.709251365692784,0.524545881349981,0.844802692155252,0,0.383830394638891,0,0.662091970365432,0.25426853765475,0,0,0,1.19730191562487,0.410462603746695,0.170388021785422,0.79318464064088,0.293104467356165,1.32506888912221,0.517131825446202,0.39669780522807,0,0.704815022316672,0.533937062838473,0.628817220398664,0,0,0,0.974340787047167,1.27668251554036,1.63205341010842,1.7548292581589,1.22538230705385,0.983617892129413,0.628216385000937,0,0.976210119215705,1.251909307065,1.72022758707021,0.332787154610557,0.496771223531068,0.968440444553616,0.124980407962107,0.606596470166591,1.14186133417987,0,0.936669811613763,0.144921028610825,0.149254802886874,0,0,0.189403005275089,0.754703705257725,0.889811221596536,0.457680136793847,0.151230923763239,0,0,0.477890301491107,0.449803112163605,0,0,0,0.521745061811734,0,0.761610424337591,0.406870733204662,0,0.322231671127465,0.464033759878494,0,0.400027764663154,0.343395705182793,0.336749488765919,0,0,1.71553273099941,0,0.226705925512272,0.694567422971502,2.44736704506468,0.358177682162975,0,0,0.353378291891762,0.771656153083659,0,0.256241518587947,0,0.303859956177382,0.691292180758654,6.23552988286043,2.92302648689399,3.27130788511688,0.655219697692825,0.737318726261158,0.211312123358627,0.39997479170986,0.320075189082423,0.344429959321631,0.567515953566836,0.368211900503681,0.279759015438889,1.86623178009892,0.127894371303652,0.754773679776773,0.471797825567689,0.436838552768056,0.33946505990805,0.212574920101683,0.495743057036009,0.558644917973244,0.636008701306837,1.02520268501629,0.80057074828547,0,0.3062454773532,0.770750701157514,1.41696576325585,1.11743701340006,1.23069818544453,1.76450187355203,0.276629009856872,0.968853873791107,0,0.196295437002051,0.235939446695481,0.183428598521679,0.808679663052368,0,0.690359926060101,0.397832444232549,0.451261970095544,0.20170506870352,0.781514011233092,0.261906694481422,0.163771917510097,0.591424344868181,0.810451015420736,1.56215619722769,1.03343398250592,0.443910671357348,0,0.548257766857182,0.992422356778588,0.175871244359621,0.638812138197976,2.67850917939143,1.68141861109412,1.21393120847326,0.455324382702595,0.443511850813194,0.576169937778896,0.514464028312255,0.40781839786099,0.263091094251396,0.354581522651905,0.222462803784138,0.549451649953598,1.25692471932802,0.840816489941367,0,0.215927591218621,0,0.571812353413251,1.26410889386181,1.16241425368125,0.347716544605159,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.4582137370881,0.31020638566432,0,1.23040974977572,0.687051635306701,0.609589624911347,1.29485767437579,0.307988420568741,0,0.485710993059139,0.701818390386317,0.198950775161368,0.237840181555137,0.45178432815584,0.439762066981716,0.301925687133347,0.385870790539723,1.31135736302374,0,0.735444965261716,0.471353094203252,0.196308467114945,1.18818560130834,0,0.169927114687817,0.657887425858975,0.515663103788617,1.49911733887393,0.535661815816973,0.352894871715692,0.561689566824178,0.730336388246517,0.458729283404541,0.430018749454354,0,0.543931921527318,0.872701380680755,0.5290268405154,0,0.462175628631418,0,0.252332849670158,0.546327859818478,0.506794004045748,0.305966489225945,0,0.36757959813938,0,0.757786982182394,0.535928260312357,0,0.310298987585686,0.426467963801962,0.952257725854961,0.710478008196067,0.620747142958579,0.224263725161227,0.700118741059814,1.21270313374932,0.435433495793923,0.684466602170562,0.404112318087525,0.215166616178029,0,0.651226148887796,0.213454691755431,0,0.179650404213174,0,0.244482888365733,0.406896178315738,0.665756774185513,1.20764276154616,0.961705476909699 | |||
|short_description=p4@GPBP1 | |||
}} |
Revision as of 05:29, 22 January 2014
Short description: | p4@GPBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GPBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000506184_5end |
EntrezGene: | GPBP1 |
HGNC: | 29520 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 6.68e-31 | 136 |
hematopoietic stem cell | 1.56e-24 | 168 |
hematopoietic cell | 2.00e-23 | 177 |
myeloid leukocyte | 5.70e-22 | 72 |
hematopoietic oligopotent progenitor cell | 6.08e-22 | 161 |
hematopoietic multipotent progenitor cell | 6.08e-22 | 161 |
hematopoietic lineage restricted progenitor cell | 5.44e-20 | 120 |
classical monocyte | 5.91e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.91e-20 | 42 |
granulocyte monocyte progenitor cell | 8.37e-18 | 67 |
myeloid cell | 2.83e-17 | 108 |
common myeloid progenitor | 2.83e-17 | 108 |
nongranular leukocyte | 6.75e-17 | 115 |
defensive cell | 1.72e-16 | 48 |
phagocyte | 1.72e-16 | 48 |
myeloid lineage restricted progenitor cell | 1.92e-15 | 66 |
macrophage dendritic cell progenitor | 1.20e-13 | 61 |
monopoietic cell | 5.77e-13 | 59 |
monocyte | 5.77e-13 | 59 |
monoblast | 5.77e-13 | 59 |
promonocyte | 5.77e-13 | 59 |
granulocyte | 1.48e-08 | 8 |
blood cell | 6.69e-08 | 11 |
Langerhans cell | 6.48e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.01e-15 | 98 |
blood island | 1.01e-15 | 98 |
bone marrow | 1.11e-15 | 76 |
bone element | 7.43e-15 | 82 |
hemolymphoid system | 2.92e-13 | 108 |
immune system | 4.82e-13 | 93 |
skeletal element | 1.08e-12 | 90 |
skeletal system | 1.66e-10 | 100 |