FFCP PHASE1:Hg19::chr5:71895544..71895568,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr5:71895544..71895568,+ | |||
|id=chr5:71895544..71895568,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.36e-42!42;CL:0000860!2.63e-41!45;CL:0002194!2.46e-29!63;CL:0000576!2.46e-29!63;CL:0000040!2.46e-29!63;CL:0000559!2.46e-29!63;CL:0002009!4.25e-28!65;CL:0000766!1.14e-27!76;CL:0000839!2.56e-25!70;CL:0000557!8.27e-25!71;CL:0002087!2.97e-17!119;CL:0000738!7.88e-17!140;CL:0000763!4.27e-15!112;CL:0000049!4.27e-15!112;CL:0002031!3.19e-13!124;CL:0000144!6.55e-12!625;CL:0000034!7.72e-12!444;CL:0000048!1.17e-11!430;CL:0002371!1.64e-11!591;CL:0000037!2.48e-11!172;CL:0000566!2.48e-11!172;CL:0000723!3.36e-11!436;CL:0000988!9.97e-11!182;CL:0000071!2.07e-10!18;CL:0002546!2.07e-10!18;CL:0000134!3.55e-10!358;CL:0002320!1.25e-09!365;CL:0002032!1.88e-09!165;CL:0000837!1.88e-09!165;CL:0000012!1.18e-08!682;CL:0002543!9.22e-08!6;CL:0000219!9.55e-08!390;CL:0000548!1.34e-07!679;CL:0000004!1.34e-07!679;CL:0000255!1.34e-07!679;CL:0002594!1.43e-07!4;CL:0002139!3.65e-07!24;CL:0000767!3.95e-07!3;CL:1000413!4.52e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.72e-71;33!CL:0002057;5.72e-71;33!CL:0000473;3.37e-48;39!CL:0000234;3.37e-48;39!CL:0000576;4.31e-40;48!CL:0000766;9.64e-26;69!CL:0000767;5.48e-14;3!CL:0002087;8.68e-12;104!CL:0000763;9.71e-12;100!CL:0000071;8.19e-08;18!CL:0000738;1.50e-07;136!CL:0002393;1.65e-07;6!CL:0002397;1.65e-07;6!CL:0002543;9.20e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.25e-76,42;CL:0002057,3.25e-76,42;CL:0000473,7.62e-66,48;CL:0000234,7.62e-66,48;CL:0002194,3.12e-55,59;CL:0000576,3.12e-55,59;CL:0000040,3.12e-55,59;CL:0000559,3.12e-55,59;CL:0000766,8.61e-55,72;CL:0002009,3.16e-53,61;CL:0000839,9.77e-49,66;CL:0000557,6.44e-48,67;CL:0000763,3.13e-34,108;CL:0000049,3.13e-34,108;CL:0000738,1.57e-29,136;CL:0002087,2.73e-29,115;CL:0002031,8.86e-28,120;CL:0002032,8.93e-24,161;CL:0000837,8.93e-24,161;CL:0000037,1.81e-22,168;CL:0000988,6.10e-21,177;CL:0000767,5.61e-14,3;CL:0000134,4.85e-08,354;CL:0000071,8.74e-08,18;CL:0002546,8.74e-08,18;CL:0002320,9.83e-08,361;CL:0002543,8.93e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.66e-55;42!CL:0000049;1.26e-08;108!CL:0002546;8.19e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.03e-29!216;UBERON:0002371!1.57e-23!80;UBERON:0001474!4.16e-21!86;UBERON:0002390!1.32e-20!102;UBERON:0003061!1.32e-20!102;UBERON:0002193!1.08e-17!112;UBERON:0004765!2.11e-17!101;UBERON:0001434!2.11e-17!101;UBERON:0002204!2.11e-15!167;UBERON:0002405!9.02e-15!115;UBERON:0001986!2.07e-10!18;UBERON:0004638!2.07e-10!18;UBERON:0004852!2.07e-10!18;UBERON:0000926!3.70e-10!448;UBERON:0004120!3.70e-10!448;UBERON:0006603!3.70e-10!448;UBERON:0001981!1.34e-09!60;UBERON:0007500!1.34e-09!60;UBERON:0004537!1.34e-09!60;UBERON:0006965!1.34e-09!60;UBERON:0002384!6.79e-09!375;UBERON:0004872!3.70e-08!84;UBERON:0006914!4.69e-08!25;UBERON:0000487!4.82e-08!22;UBERON:0001637!4.84e-08!42;UBERON:0003509!4.84e-08!42;UBERON:0004572!4.84e-08!42;UBERON:0000055!1.33e-07!69;UBERON:0001310!1.43e-07!4;UBERON:0003915!4.52e-07!9;UBERON:0004700!4.52e-07!9;UBERON:0001917!4.52e-07!9;UBERON:0001638!9.40e-07!9;UBERON:0003920!9.40e-07!9;UBERON:0004582!9.40e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;8.19e-08;18!UBERON:0001986;8.19e-08;18!UBERON:0004852;8.19e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.66e-41,76;UBERON:0001474,5.28e-38,82;UBERON:0004765,4.71e-34,90;UBERON:0002405,9.57e-33,93;UBERON:0002390,9.64e-31,98;UBERON:0003061,9.64e-31,98;UBERON:0001434,5.37e-30,100;UBERON:0002193,2.75e-27,108;UBERON:0003081,1.03e-25,203;UBERON:0002204,1.28e-16,167;UBERON:0000926,1.44e-13,315;UBERON:0004120,1.44e-13,315;UBERON:0006603,1.44e-13,315;UBERON:0004638,8.74e-08,18;UBERON:0001986,8.74e-08,18;UBERON:0004852,8.74e-08,18;UBERON:0002384,2.57e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,8.26064981382698,4.60595277716655,7.58599004248772,0,0,0,0,0,0,44.8736280910821,22.2604336691857,23.2201631665961,0,0,0,0.872389432677388,0.377875943688809,0.727752183563449,1.16214518452842,0.411167888021826,4.33588919253145,3.45230870786581,5.89169625016932,9.93225365532058,39.9904989654477,54.2207134210414,70.4217730290577,1.31769637679823,1.09162460023138,1.57306439111559,46.8308355327481,68.3578827672079,106.129962882641,0,1.99463657621632,1.70489900213078,12.4789972610291,8.5107783703671,19.9303119678584,1.00499466102697,5.21482918420201,7.8187984093842,3.63239701580021,15.8359383474653,19.9371304087757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,5.04457706683382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66943437013739,0,0.74291500265913,2.18638648103376,0,0.694281003215189,1.13061588384802,0.419499436209906,0.275118041940067,2.08994966536811,0,0,0,0,0,0,0,0,0.17859945656816,0.44905874525234,0,1.53316637465883,2.84779697870439,1.28241220751285,0,0,0,0,0,0.794455084879313,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,1.97030760201927,0,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0.206768026122887,0.862856803274467,0.853820462427555,0,1.66435439510497,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,2.27466768141793,0.510281115829547,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.286249773483982,0,0,0,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,1.62328301570163,0.6196469961995,0.281695602532241,0.143411352204052,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0,0.15543720058278,1.03498604992744,0,0,0.155262956876259,0,0,0,0.300515217994437,0,0.406870733204662,0.909243296012797,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62041277132864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:71895544..71895568,+ | |||
}} |
Revision as of 05:54, 22 January 2014
Short description: | p@chr5:71895544..71895568, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:71895544..71895568, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.25e-76 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.25e-76 | 42 |
defensive cell | 7.62e-66 | 48 |
phagocyte | 7.62e-66 | 48 |
monopoietic cell | 3.12e-55 | 59 |
monocyte | 3.12e-55 | 59 |
monoblast | 3.12e-55 | 59 |
promonocyte | 3.12e-55 | 59 |
myeloid leukocyte | 8.61e-55 | 72 |
macrophage dendritic cell progenitor | 3.16e-53 | 61 |
myeloid lineage restricted progenitor cell | 9.77e-49 | 66 |
granulocyte monocyte progenitor cell | 6.44e-48 | 67 |
myeloid cell | 3.13e-34 | 108 |
common myeloid progenitor | 3.13e-34 | 108 |
leukocyte | 1.57e-29 | 136 |
nongranular leukocyte | 2.73e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 8.86e-28 | 120 |
hematopoietic oligopotent progenitor cell | 8.93e-24 | 161 |
hematopoietic multipotent progenitor cell | 8.93e-24 | 161 |
hematopoietic stem cell | 1.81e-22 | 168 |
hematopoietic cell | 6.10e-21 | 177 |
basophil | 5.61e-14 | 3 |
mesenchymal cell | 4.85e-08 | 354 |
blood vessel endothelial cell | 8.74e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.74e-08 | 18 |
connective tissue cell | 9.83e-08 | 361 |
vein endothelial cell | 8.93e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.66e-41 | 76 |
bone element | 5.28e-38 | 82 |
skeletal element | 4.71e-34 | 90 |
immune system | 9.57e-33 | 93 |
hematopoietic system | 9.64e-31 | 98 |
blood island | 9.64e-31 | 98 |
skeletal system | 5.37e-30 | 100 |
hemolymphoid system | 2.75e-27 | 108 |
lateral plate mesoderm | 1.03e-25 | 203 |
musculoskeletal system | 1.28e-16 | 167 |
mesoderm | 1.44e-13 | 315 |
mesoderm-derived structure | 1.44e-13 | 315 |
presumptive mesoderm | 1.44e-13 | 315 |
blood vessel endothelium | 8.74e-08 | 18 |
endothelium | 8.74e-08 | 18 |
cardiovascular system endothelium | 8.74e-08 | 18 |
connective tissue | 2.57e-07 | 371 |