FFCP PHASE1:Hg19::chr5:135382258..135382274,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7045 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11771 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=234bp_to_uc011cyb.1_5end | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_29_at_TGFBI_5end | |||
|id=chr5:135382258..135382274,+ | |||
|ontology_enrichment_celltype=CL:0002194!3.67e-26!63;CL:0000576!3.67e-26!63;CL:0000040!3.67e-26!63;CL:0000559!3.67e-26!63;CL:0002009!6.45e-25!65;CL:0000860!8.19e-23!45;CL:0002057!1.95e-22!42;CL:0000839!3.96e-22!70;CL:0000557!1.28e-21!71;CL:0000766!2.74e-19!76;CL:0000763!4.80e-09!112;CL:0000049!4.80e-09!112;CL:0002087!1.72e-08!119;CL:0002031!1.07e-07!124;CL:0000048!6.53e-07!430;CL:0000723!8.75e-07!436;CL:0000235!8.90e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.27e-47;33!CL:0002057;2.27e-47;33!CL:0000473;2.54e-40;39!CL:0000234;2.54e-40;39!CL:0000576;4.89e-24;48!CL:0000766;2.10e-13;69!CL:0000763;2.83e-09;100!CL:0000738;2.39e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.57e-45,48;CL:0000234,2.57e-45,48;CL:0000860,4.20e-41,42;CL:0002057,4.20e-41,42;CL:0002194,7.14e-40,59;CL:0000576,7.14e-40,59;CL:0000040,7.14e-40,59;CL:0000559,7.14e-40,59;CL:0002009,1.80e-38,61;CL:0000839,2.46e-35,66;CL:0000557,9.17e-35,67;CL:0000766,3.87e-32,72;CL:0000763,2.47e-20,108;CL:0000049,2.47e-20,108;CL:0002087,6.90e-19,115;CL:0002031,5.88e-18,120;CL:0000738,1.96e-15,136;CL:0002032,1.73e-12,161;CL:0000837,1.73e-12,161;CL:0000037,8.08e-12,168;CL:0000988,4.90e-11,177;CL:0000134,2.72e-08,354;CL:0002320,4.83e-08,361;CL:0000219,4.85e-08,386;CL:0000048,7.15e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;4.77e-31;42!CL:0000049;3.78e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.11e-18!80;UBERON:0001474!2.02e-16!86;UBERON:0004765!2.22e-15!101;UBERON:0001434!2.22e-15!101;UBERON:0002204!2.30e-14!167;UBERON:0002390!8.41e-12!102;UBERON:0003061!8.41e-12!102;UBERON:0002405!5.15e-11!115;UBERON:0002193!3.27e-10!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.77e-30,76;UBERON:0001474,7.79e-28,82;UBERON:0004765,4.52e-25,90;UBERON:0002405,3.72e-24,93;UBERON:0002390,9.39e-23,98;UBERON:0003061,9.39e-23,98;UBERON:0001434,3.13e-22,100;UBERON:0002193,2.47e-20,108;UBERON:0002204,2.14e-13,167;UBERON:0003081,2.34e-10,203;UBERON:0002384,1.06e-07,371 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0.487932798790507,0.123121058076788,0,0,0,1.09499540058307,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,3.34415949192999,3.77875943688809,1.69808842831471,1.39457422143411,2.05583944010913,0.619412741790207,2.8769239232215,1.7931249457037,1.18241114944293,0.344745680736619,0.645484683583826,0,3.38836211176688,2.72906150057846,2.47195832889593,1.22433556948361,0.320929027076094,1.27867425159808,3.62836430205388,0.797854630486527,0.852449501065388,0.290209238628584,0,0,1.50749199154046,1.0429658368404,0.434377689410233,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0,0.16072558669708,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0,2.43317435151318,0.283604451492204,0.443458794925128,0.43917392846563,0.0654895377488563,0,0,0.649094787309367,0.870648686496336,1.72845348674525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.98667019366864,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.358779271377724,0,0.211931901159562,0.300091096084402,0.103052529238439,1.54584324027377,0,1.35021065793013,0.194874010322397,1.00973509697646,0,0,1.06502877754984,0.302256294682921,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0.982827216677626,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.594524649154913,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,1.00451418286425,2.10833939483032,0.239624855491583,0,0,0.723906533337896,0.410952645100767,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.356857977594324,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0.767309866440312,0.561320188866147,0,0,0.64341568457443,0,0.154209693802656,0,0,0,0.116210378459959,0,0.40101294060657,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0.0890320356467374,0.165284915360978,0.384380134730212,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0,1.05650146756755,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0,0.199679000498991,0.858452096273142,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0.979762080328227,1.19730191562487,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0,0.159296767163702,0,0.310525913752519,0.829412415681711,0,0,0,0,0.406870733204662,0.545545977607678,0.214821114084977,0,0.398095888698616,1.60011105865261,0.686791410365586,0,0,0.192619830407303,0,0,0,0,0,0.358177682162975,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.366857197043358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0.940634592723046,0,0,0.196308467114945,0,0.4226557275834,0.169927114687817,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.476128862927481,0,0,0,0,0.202117188958219,0,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p29@TGFBI | |||
}} |
Revision as of 07:34, 22 January 2014
Short description: | p29@TGFBI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_TGFBI_5end |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | 234bp_to_uc011cyb.1_5end |
EntrezGene: | TGFBI |
HGNC: | 11771 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.57e-45 | 48 |
phagocyte | 2.57e-45 | 48 |
classical monocyte | 4.20e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.20e-41 | 42 |
monopoietic cell | 7.14e-40 | 59 |
monocyte | 7.14e-40 | 59 |
monoblast | 7.14e-40 | 59 |
promonocyte | 7.14e-40 | 59 |
macrophage dendritic cell progenitor | 1.80e-38 | 61 |
myeloid lineage restricted progenitor cell | 2.46e-35 | 66 |
granulocyte monocyte progenitor cell | 9.17e-35 | 67 |
myeloid leukocyte | 3.87e-32 | 72 |
myeloid cell | 2.47e-20 | 108 |
common myeloid progenitor | 2.47e-20 | 108 |
nongranular leukocyte | 6.90e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 5.88e-18 | 120 |
leukocyte | 1.96e-15 | 136 |
hematopoietic oligopotent progenitor cell | 1.73e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-12 | 161 |
hematopoietic stem cell | 8.08e-12 | 168 |
hematopoietic cell | 4.90e-11 | 177 |
mesenchymal cell | 2.72e-08 | 354 |
connective tissue cell | 4.83e-08 | 361 |
motile cell | 4.85e-08 | 386 |
multi fate stem cell | 7.15e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.77e-30 | 76 |
bone element | 7.79e-28 | 82 |
skeletal element | 4.52e-25 | 90 |
immune system | 3.72e-24 | 93 |
hematopoietic system | 9.39e-23 | 98 |
blood island | 9.39e-23 | 98 |
skeletal system | 3.13e-22 | 100 |
hemolymphoid system | 2.47e-20 | 108 |
musculoskeletal system | 2.14e-13 | 167 |
lateral plate mesoderm | 2.34e-10 | 203 |
connective tissue | 1.06e-07 | 371 |