FFCP PHASE1:Hg19::chr6:17291794..17291815,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:17291794..17291815,+ | |||
|id=chr6:17291794..17291815,+ | |||
|ontology_enrichment_celltype=CL:0000242!7.57e-13!2 | |||
|ontology_enrichment_celltype_v019=CL:0000047;9.07e-18;2!CL:0000632;2.59e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,2.07e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.84e-34;1!UBERON:0004140;5.05e-34;1!UBERON:0006603;1.37e-07;65 | |||
|ontology_enrichment_disease=DOID:2513!2.09e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001630!1.56e-13!2;UBERON:0005090!1.56e-13!2;UBERON:0000341!8.03e-13!2;UBERON:0003978!5.85e-09!3;UBERON:0009751!5.85e-09!3;UBERON:0000946!5.85e-09!3;UBERON:0002523!5.85e-09!3;UBERON:0005983!5.85e-09!3;UBERON:0002165!5.85e-09!3;UBERON:0002062!5.85e-09!3;UBERON:0007280!5.85e-09!3;UBERON:0002110!1.44e-08!3;UBERON:0006242!1.44e-08!3;UBERON:0005418!1.20e-07!1;UBERON:0001389!1.20e-07!1;UBERON:0000026!1.20e-07!1;UBERON:0008784!1.20e-07!1;UBERON:0006058!1.20e-07!1;UBERON:0003663!1.20e-07!1;UBERON:0001383!1.20e-07!1;UBERON:0004256!1.20e-07!1;UBERON:0002529!1.20e-07!1;UBERON:0004708!1.20e-07!1;UBERON:0002101!1.20e-07!1;UBERON:0004709!1.20e-07!1;UBERON:0003661!1.20e-07!1;UBERON:0002471!1.20e-07!1;UBERON:0004357!1.20e-07!1;UBERON:0009872!1.20e-07!1;UBERON:0004347!1.20e-07!1;UBERON:0005420!1.20e-07!1;UBERON:0005732!1.20e-07!1;UBERON:0006057!1.20e-07!1;UBERON:0000978!1.20e-07!1;UBERON:0002103!1.20e-07!1;UBERON:0001665!1.20e-07!1;UBERON:0003823!1.20e-07!1;UBERON:0000154!1.20e-07!1;UBERON:0005733!1.20e-07!1;UBERON:0005730!1.20e-07!1;UBERON:0002426!1.44e-07!1;UBERON:0003831!1.44e-07!1;UBERON:0003898!1.44e-07!1;UBERON:0004830!1.44e-07!1;UBERON:0001774!1.44e-07!1;UBERON:0003830!1.44e-07!1;UBERON:0005175!1.44e-07!1;UBERON:0003897!1.44e-07!1;UBERON:0001103!1.44e-07!1;UBERON:0010084!1.44e-07!1;UBERON:0000989!1.74e-07!1;UBERON:0008811!1.74e-07!1;UBERON:0006258!1.74e-07!1;UBERON:0005876!1.74e-07!1;UBERON:0004874!1.74e-07!1;UBERON:0002135!2.23e-07!1;UBERON:0002146!2.67e-07!1;UBERON:0005623!2.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;5.05e-34;1!UBERON:0000026;5.05e-34;1!UBERON:0008784;5.05e-34;1!UBERON:0006058;5.05e-34;1!UBERON:0003663;5.05e-34;1!UBERON:0004256;5.05e-34;1!UBERON:0004708;5.05e-34;1!UBERON:0002101;5.05e-34;1!UBERON:0004709;5.05e-34;1!UBERON:0002529;5.05e-34;1!UBERON:0010538;5.05e-34;1!UBERON:0003661;5.05e-34;1!UBERON:0010890;5.05e-34;1!UBERON:0002471;5.05e-34;1!UBERON:0001383;5.05e-34;1!UBERON:0010758;5.05e-34;1!UBERON:0010707;5.05e-34;1!UBERON:0000978;5.05e-34;1!UBERON:0002103;5.05e-34;1!UBERON:0001665;5.05e-34;1!UBERON:0003823;5.05e-34;1!UBERON:0000154;5.05e-34;1!UBERON:0010709;5.05e-34;1!UBERON:0005090;9.07e-18;2!UBERON:0001630;9.07e-18;2!UBERON:0001134;3.01e-09;16!UBERON:0002036;3.01e-09;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,5.05e-34,1;UBERON:0001389,5.05e-34,1;UBERON:0000026,5.05e-34,1;UBERON:0008784,5.05e-34,1;UBERON:0006058,5.05e-34,1;UBERON:0003663,5.05e-34,1;UBERON:0004256,5.05e-34,1;UBERON:0004708,5.05e-34,1;UBERON:0002101,5.05e-34,1;UBERON:0004709,5.05e-34,1;UBERON:0002529,5.05e-34,1;UBERON:0010538,5.05e-34,1;UBERON:0003661,5.05e-34,1;UBERON:0010890,5.05e-34,1;UBERON:0002471,5.05e-34,1;UBERON:0001383,5.05e-34,1;UBERON:0004357,5.05e-34,1;UBERON:0004347,5.05e-34,1;UBERON:0005420,5.05e-34,1;UBERON:0005732,5.05e-34,1;UBERON:0010758,5.05e-34,1;UBERON:0010707,5.05e-34,1;UBERON:0000978,5.05e-34,1;UBERON:0002103,5.05e-34,1;UBERON:0001665,5.05e-34,1;UBERON:0003823,5.05e-34,1;UBERON:0000154,5.05e-34,1;UBERON:0010709,5.05e-34,1;UBERON:0005733,5.05e-34,1;UBERON:0005730,5.05e-34,1;UBERON:0005090,9.07e-18,2;UBERON:0001630,9.07e-18,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,1.00775208730089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0,0.224263725161227,0,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p@chr6:17291794..17291815,+ | |||
}} |
Revision as of 10:17, 22 January 2014
Short description: | p@chr6:17291794..17291815, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:17291794..17291815, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 2.07e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 5.05e-34 | 1 |
soleus muscle | 5.05e-34 | 1 |
appendage | 5.05e-34 | 1 |
lower limb segment | 5.05e-34 | 1 |
multi-limb segment region | 5.05e-34 | 1 |
hindlimb muscle | 5.05e-34 | 1 |
hindlimb zeugopod muscle | 5.05e-34 | 1 |
paired limb/fin | 5.05e-34 | 1 |
limb | 5.05e-34 | 1 |
pelvic appendage | 5.05e-34 | 1 |
limb segment | 5.05e-34 | 1 |
paired limb/fin segment | 5.05e-34 | 1 |
limb muscle | 5.05e-34 | 1 |
pelvic complex muscle | 5.05e-34 | 1 |
zeugopod | 5.05e-34 | 1 |
muscle of leg | 5.05e-34 | 1 |
paired limb/fin bud | 5.05e-34 | 1 |
limb bud | 5.05e-34 | 1 |
pelvic appendage bud | 5.05e-34 | 1 |
limb/fin field | 5.05e-34 | 1 |
subdivision of organism along appendicular axis | 5.05e-34 | 1 |
appendage girdle complex | 5.05e-34 | 1 |
leg | 5.05e-34 | 1 |
hindlimb | 5.05e-34 | 1 |
triceps surae | 5.05e-34 | 1 |
hindlimb zeugopod | 5.05e-34 | 1 |
posterior region of body | 5.05e-34 | 1 |
pelvic complex | 5.05e-34 | 1 |
limb field | 5.05e-34 | 1 |
hindlimb/pelvic fin field | 5.05e-34 | 1 |
muscle structure | 9.07e-18 | 2 |
muscle organ | 9.07e-18 | 2 |