FFCP PHASE1:Hg19::chr7:1600433..1600475,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=202915 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28797 | |||
|TSSclassifier=strong | |||
|UniProt=F8WEG1,C9JDD9 | |||
|association_with_transcript=0bp_to_ENST00000421923,ENST00000431208_5end | |||
|coexpression_cluster_id=C665 | |||
|description=CAGE_peak_2_at_TMEM184A_5end | |||
|id=chr7:1600433..1600475,- | |||
|ontology_enrichment_celltype=CL:0002076!3.71e-21!43;CL:0000223!7.51e-15!59;CL:0002368!2.79e-13!13;CL:0002159!1.98e-10!13;CL:0002251!2.06e-10!21;CL:0000066!4.60e-10!254;CL:0000622!2.87e-09!5;CL:0000244!7.67e-09!4;CL:0000731!7.67e-09!4;CL:0000154!1.22e-07!6;CL:0002202!1.99e-07!9;CL:0002632!1.99e-07!9;CL:0002328!7.52e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002076;3.02e-18;42!CL:0002368;4.30e-17;13!CL:0000244;6.58e-13;4!CL:0000731;6.58e-13;4!CL:0002202;2.06e-11;9!CL:0002632;2.06e-11;9!CL:0002251;2.21e-10;20!CL:0002328;6.86e-10;3!CL:0002159;1.40e-09;14!CL:0000307;2.72e-09;3!CL:0002621;4.58e-09;3!CL:0000575;1.01e-07;2!CL:0001014;5.58e-07;2!CL:0001016;5.58e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.15e-25,42;CL:0000223,4.58e-19,58;CL:0002368,4.95e-17,13;CL:0000244,5.75e-13,4;CL:0000731,5.75e-13,4;CL:0002202,2.57e-11,9;CL:0002632,2.57e-11,9;CL:0002251,2.05e-10,20;CL:0000066,3.08e-10,253;CL:0002328,7.40e-10,3;CL:0002159,1.40e-09,14;CL:0000068,3.54e-09,3;CL:0000069,3.54e-09,3;CL:0000307,3.54e-09,3;CL:0000377,3.54e-09,3;CL:0002621,4.58e-09,3;CL:0000575,1.02e-07,2;CL:0001014,5.10e-07,2;CL:0001016,5.10e-07,2;CL:0002077,8.50e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000223;1.11e-10;58!CL:0000377;2.72e-09;3!UBERON:0008814;2.27e-07;2!UBERON:0010056;2.27e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!2.04e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.54e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.81e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.16e-16!72;UBERON:0000161!3.77e-15!35;UBERON:0000166!6.78e-15!21;UBERON:0000165!9.40e-12!28;UBERON:0000930!9.40e-12!28;UBERON:0004119!1.78e-11!169;UBERON:0000925!1.78e-11!169;UBERON:0006595!1.78e-11!169;UBERON:0003102!9.71e-10!95;UBERON:0000065!5.31e-09!53;UBERON:0000974!2.87e-08!10;UBERON:0006562!8.63e-08!11;UBERON:0007196!9.94e-08!14;UBERON:0001558!9.94e-08!14;UBERON:0003408!1.41e-07!10;UBERON:0001044!2.27e-07!6;UBERON:0003293!2.27e-07!6;UBERON:0003294!2.27e-07!6;UBERON:0010047!2.27e-07!6;UBERON:0000167!2.27e-07!6;UBERON:0001444!2.44e-07!48;UBERON:0001723!3.95e-07!3;UBERON:0001033!3.95e-07!3;UBERON:0010056!3.95e-07!3;UBERON:0000078!3.95e-07!18;UBERON:0000365!5.01e-07!5;UBERON:0001007!6.00e-07!155;UBERON:0001555!6.00e-07!155;UBERON:0007026!6.00e-07!155;UBERON:0004815!7.52e-07!3;UBERON:0002031!7.52e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.33e-11;12!UBERON:0000161;5.33e-11;19!UBERON:0000166;5.33e-11;19!UBERON:0000165;1.04e-10;28!UBERON:0000365;2.53e-10;5!UBERON:0001723;3.01e-10;3!UBERON:0001033;3.01e-10;3!UBERON:0004815;6.86e-10;3!UBERON:0002031;6.86e-10;3!UBERON:0001949;4.58e-09;3!UBERON:0007196;6.86e-09;15!UBERON:0001558;6.86e-09;15!UBERON:0005910;1.35e-08;6!UBERON:0000974;2.20e-08;6!UBERON:0003729;1.92e-07;13!UBERON:0006562;2.90e-07;2!UBERON:0003343;2.93e-07;4!UBERON:0004785;2.93e-07;4!UBERON:0003126;6.33e-07;7!UBERON:0001005;6.33e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000161,2.04e-17,36;UBERON:0000166,2.65e-14,22;UBERON:0004119,9.02e-13,160;UBERON:0000925,9.02e-13,160;UBERON:0006595,9.02e-13,160;UBERON:0001004,2.03e-12,74;UBERON:0003102,3.83e-11,99;UBERON:0000365,2.27e-10,5;UBERON:0001723,2.71e-10,3;UBERON:0001033,2.71e-10,3;UBERON:0010056,2.71e-10,3;UBERON:0000165,2.87e-10,29;UBERON:0000930,2.87e-10,29;UBERON:0004815,7.40e-10,3;UBERON:0002031,7.40e-10,3;UBERON:0001949,4.58e-09,3;UBERON:0007196,8.05e-09,15;UBERON:0001558,8.05e-09,15;UBERON:0005910,1.23e-08,6;UBERON:0000065,8.19e-08,54;UBERON:0001444,1.39e-07,49;UBERON:0003729,1.80e-07,13;UBERON:0000153,1.84e-07,62;UBERON:0007811,1.84e-07,62;UBERON:0000033,2.56e-07,56;UBERON:0003343,2.60e-07,4;UBERON:0004785,2.60e-07,4;UBERON:0001007,2.94e-07,145;UBERON:0001555,2.94e-07,145;UBERON:0007026,2.94e-07,145;UBERON:0006562,5.49e-07,11;UBERON:0003126,7.43e-07,7;UBERON:0001005,7.43e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.59710612239464,3.31326510656075,8.13458822366933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,17.486173838042,17.4268688108682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4662572514208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,4.36393792945335,1.14721838155602,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70701484124853,3.37205259772859,0.703702806881416,0.648119116109707,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,1.00789276919316,0.425325291727159,0.447792613514241,1.16253575405585,0.766765358330422,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80455823272956,16.022092074846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,2.29706215198469,1.95018073810956,0,0,0,0,0,0,0,0,0,4.79326254546837,0.576570202095319,2.4246415373971,7.78914912587734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,3.07910760721639,3.35151137767894,1.08890984861323,0.376575203107117,6.02707521739722,13.47771805341,16.8503458343937,2.75668080248351,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31103490476991,2.37571744666111,42.0810161875948,0,0,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,5.03081368748361,0,0,0,0,0,0,0,0.724999575434793,2.04828206913899,0,0,0,0,0,0,0,0,0,0,0,0,3.34616986268648,7.23332429935692,0,0,0.0897576444097721,0,2.23300811812344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0878525631105,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,1.56203764501618,2.05784034570193,0,0.873633341210151,0,0,0,0,38.4076505294141,0,2.25980740780532,0,0,0,0,0,0,0,0,0,0,0,0,22.8623213578292,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.349843349309,16.2498410457169,0,0.670869375198532,0,0.419636705079985,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0.414239055347196,0,0,0,6.38341257770182,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.11301144772778,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.71662413160154,0,1.28400018965175,3.81234698296116,0,0,0,0.150420656698515,0,0,0,0,0.147856086217045,0,0,0,0,0,1.09651553371436,5.95453414067153,0,2.29972369751271,0,0,0,0,1.06442844195167,0,0,0,0,0,0,1.88383422841234,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0.51215543128185,9.67763526539729,0.860454717640555,0,0,1.27016115057279,0,0,0,0.111855431797792,0,0.121917924982269,0.647428837187895,0,0,3.39997695141398,0,0.397901550322736,0,0,0,0,0.0771741581079447,0,0,0.735444965261716,0,0,0,0,0,0,0,0,1.07132363163395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.275684698604535,0,0.227336094654718,0,0,0,20.6836962443951,0.952257725854961,0.129177819672012,0.434523000071005,0,0,0,28.5208939745019,8.89806582821731,34.618955249498,7.17222053926764,0.99798106963804,0,0,0,0,0,0.977931553462932,6.10344267473608,3.99454064511308,0.201273793591026,0 | |||
|short_description=p2@TMEM184A | |||
}} |
Revision as of 15:24, 22 January 2014
Short description: | p2@TMEM184A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMEM184A_5end |
Coexpression cluster: | C665_amniotic_esophagus_tongue_Corneal_tonsil_salivary_Urothelial |
Association with transcript: | 0bp_to_ENST00000421923, ENST00000431208_5end |
EntrezGene: | TMEM184A |
HGNC: | 28797 |
UniProt: | F8WEG1C9JDD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.15e-25 | 42 |
endodermal cell | 4.58e-19 | 58 |
respiratory epithelial cell | 4.95e-17 | 13 |
transitional epithelial cell | 5.75e-13 | 4 |
urothelial cell | 5.75e-13 | 4 |
epithelial cell of tracheobronchial tree | 2.57e-11 | 9 |
epithelial cell of lower respiratory tract | 2.57e-11 | 9 |
epithelial cell of alimentary canal | 2.05e-10 | 20 |
epithelial cell | 3.08e-10 | 253 |
bronchial epithelial cell | 7.40e-10 | 3 |
general ecto-epithelial cell | 1.40e-09 | 14 |
duct epithelial cell | 3.54e-09 | 3 |
branched duct epithelial cell | 3.54e-09 | 3 |
tracheal epithelial cell | 3.54e-09 | 3 |
tracheoblast | 3.54e-09 | 3 |
gingival epithelial cell | 4.58e-09 | 3 |
corneal epithelial cell | 1.02e-07 | 2 |
CD1a-positive Langerhans cell | 5.10e-07 | 2 |
immature CD1a-positive Langerhans cell | 5.10e-07 | 2 |
ecto-epithelial cell | 8.50e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
orifice | 2.04e-17 | 36 |
oral opening | 2.65e-14 | 22 |
endoderm-derived structure | 9.02e-13 | 160 |
endoderm | 9.02e-13 | 160 |
presumptive endoderm | 9.02e-13 | 160 |
respiratory system | 2.03e-12 | 74 |
surface structure | 3.83e-11 | 99 |
urothelium | 2.27e-10 | 5 |
tongue | 2.71e-10 | 3 |
gustatory system | 2.71e-10 | 3 |
future tongue | 2.71e-10 | 3 |
mouth | 2.87e-10 | 29 |
stomodeum | 2.87e-10 | 29 |
lower respiratory tract epithelium | 7.40e-10 | 3 |
epithelium of bronchus | 7.40e-10 | 3 |
gingival epithelium | 4.58e-09 | 3 |
tracheobronchial tree | 8.05e-09 | 15 |
lower respiratory tract | 8.05e-09 | 15 |
transitional epithelium | 1.23e-08 | 6 |
respiratory tract | 8.19e-08 | 54 |
subdivision of head | 1.39e-07 | 49 |
mouth mucosa | 1.80e-07 | 13 |
anterior region of body | 1.84e-07 | 62 |
craniocervical region | 1.84e-07 | 62 |
head | 2.56e-07 | 56 |
mucosa of oral region | 2.60e-07 | 4 |
respiratory system mucosa | 2.60e-07 | 4 |
digestive system | 2.94e-07 | 145 |
digestive tract | 2.94e-07 | 145 |
primitive gut | 2.94e-07 | 145 |
pharynx | 5.49e-07 | 11 |
trachea | 7.43e-07 | 7 |
respiratory airway | 7.43e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.81e-09 | 14 |