FFCP PHASE1:Hg19::chr7:48672353..48672374,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1360 | |||
|description=CAGE_peak_at_chr7:48672353..48672374,+ | |||
|id=chr7:48672353..48672374,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.93e-19!42;CL:0000860!2.71e-18!45;CL:0000839!8.08e-17!70;CL:0000557!3.19e-16!71;CL:0002009!7.41e-16!65;CL:0000766!2.42e-15!76;CL:0002194!9.16e-15!63;CL:0000576!9.16e-15!63;CL:0000040!9.16e-15!63;CL:0000559!9.16e-15!63;CL:0000763!3.08e-14!112;CL:0000049!3.08e-14!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.80e-29;33!CL:0002057;3.80e-29;33!CL:0000473;9.62e-24;39!CL:0000234;9.62e-24;39!CL:0000576;4.75e-16;48!CL:0000766;6.84e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.06e-30,42;CL:0002057,1.06e-30,42;CL:0000473,1.27e-30,48;CL:0000234,1.27e-30,48;CL:0000839,3.95e-26,66;CL:0000557,1.07e-25,67;CL:0000766,1.87e-24,72;CL:0002009,5.09e-24,61;CL:0002194,3.01e-22,59;CL:0000576,3.01e-22,59;CL:0000040,3.01e-22,59;CL:0000559,3.01e-22,59;CL:0000763,2.65e-21,108;CL:0000049,2.65e-21,108;CL:0000738,5.25e-10,136;CL:0002031,6.71e-10,120;CL:0002032,3.96e-09,161;CL:0000837,3.96e-09,161;CL:0000037,2.26e-08,168;CL:0000988,4.37e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;2.28e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.44e-15!80;UBERON:0001474!6.41e-14!86;UBERON:0004765!1.22e-11!101;UBERON:0001434!1.22e-11!101;UBERON:0002390!5.00e-10!102;UBERON:0003061!5.00e-10!102;UBERON:0002193!4.47e-09!112;UBERON:0002405!6.13e-09!115;UBERON:0002204!1.45e-08!167;UBERON:0003081!8.61e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.25e-23,76;UBERON:0001474,2.71e-20,82;UBERON:0004765,1.84e-18,90;UBERON:0002405,7.38e-18,93;UBERON:0001434,3.70e-16,100;UBERON:0002390,1.23e-15,98;UBERON:0003061,1.23e-15,98;UBERON:0002193,2.58e-14,108;UBERON:0002204,1.48e-13,167;UBERON:0003081,1.74e-10,203 | |||
|phase1_expression=0.908391896352783,0.214100523890983,0.281908808191942,2.00146596706261,0,0.872338524100369,0,0.631719873426831,1.56711376919903,0,0.697801167972428,0.655324116390517,0.527533956456907,0.37129905888014,0,6.05092631806598,3.61616716814386,5.84248072309899,1.95173119516203,0.246242116153576,0.408001382488506,1.25381888591235,0,0.547497700291537,0.376627918784408,0.152826811495903,0.164201178899891,0.314843125254717,0,1.91914699048606,5.57338043937874,0.919421224478927,0.6024118375565,0.739508020333575,0.0774672005803016,0,0.880801318004542,1.10799081706375,0,0.868043482863407,0,0,0,3.05336301437086,3.02300754951048,8.24785808038575,7.90258725479328,4.93401465626191,4.64559556342655,7.76769459269806,12.808035326455,4.96612682766029,11.3766074643084,8.39130088658974,4.06279459783025,6.02375486536335,3.82068610080984,4.04502272001152,7.34601341690166,5.77672248736969,8.31138263538754,9.56568770541477,5.78444607102732,4.68847225585964,4.35313857942876,11.9150897185139,15.5705562248894,5.7787193009051,8.34372669472322,3.47502151528187,6.65939452896706,5.89244217580104,8.54448446090388,2.32380814943136,1.91343869968539,1.25795187305026,1.46027220490444,1.65194582125657,7.23265140136861,0,1.79025009479181,1.0959849225878,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,2.64342657158052,0,1.84368859342554,0.196709770113833,0.393010762749165,0.205601498999509,2.50779743086017,0.32592226663359,0,3.89653456815823,1.22551502573691,2.65145316727353,0.886135578334485,2.70803863765016,1.66518715643378,1.69077151827842,2.46656856905514,0.829050053357545,3.18783394308558,2.52087157375503,4.81573490561484,6.27213142829861,2.94604291013672,0,0.34362744548263,2.78321661221453,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.403213486449465,1.06976078313403,0.724122019413995,0,0,1.02290049474824,0,0,0.144846518960824,0,3.40644409211845,0.189069634328136,0.221729397462564,0.263504357079378,0,0.364295288292542,0.370784442784429,0.97364218096405,1.56716763569341,0.930705723632056,0.238490624305342,0,0.371457501329565,0.39752481473341,2.58070378531837,0.694281003215189,0.56530794192401,0.419499436209906,0.275118041940067,1.04497483268405,0.258416759169329,0,0,0,1.52054421143703,0.24406205754817,0,0,0.267899184852239,0.898117490504679,0.788280363383256,0,0.949265659568129,0.916008719652036,1.31780417436063,0,0.872188104285069,0.496971951695318,0.12663051166458,2.25095607382472,0.286836620748814,1.06400514659507,1.12135520028461,2.1349799145941,0.74000264525148,0,0.134710672069688,0,0.908144565869588,0,0.70296429550139,0.312160076830321,0,0,0,0,0.280901613404497,0.204154171254893,0.122834317311768,0.206651562351531,1.18800285728205,0.989067717114227,0,0.718618141816238,0,0.125118519871964,0,1.31693286264251,0,1.20190447125277,0.680593098960126,0,0.640672166455702,0,0.300091096084402,0.206105058476878,0,0.37223371266318,1.0126579934476,0.0974370051611986,0,0.0920498986422993,1.2931684545505,0,0,0.339121184620975,0.773043412653187,1.90922284413584,0.286804595389004,0.243947412259191,0,0,0,1.7662459561294,3.28479623168247,0,0,5.52539685409922,0.464367928031979,0,2.12952240071719,2.02301628093722,0.723033089650446,1.8749975364507,1.30727666455444,1.89816495288877,2.42696354688296,3.13954344200554,0,0,1.40241773803446,1.2347220339942,0,1.26755034821831,0,0,0,0.122988438543114,3.43135620597051,0.109750285408626,0,0.301586917234893,0.0925884451585296,0,0,0,0.695582429850461,1.87853910777315,0,11.5746378144153,3.80508304469197,0.790204397959275,1.71697232418975,0.738651018262192,0.234004265139238,0.743155811443641,0.93733833986777,1.84780341018745,1.13420077793909,0,0,0.766765358330422,0,1.84901711427775,4.35389042635621,4.61183850934277,6.69084897159814,0.253991577168676,1.14596527667483,0,0,0.205654985406647,6.00686115687835,1.42913216315289,0.112131084345361,0,0.1466765716419,0,7.15312891703765,10.143633030672,0,0,1.02882949704857,0,0.532844358032199,0,0,0.823240336780769,0.325736184293735,0.710783897485092,0,0,0,0.699810938274399,15.8110914833548,5.52482800575339,10.5416969741516,0.479249710983165,0,8.5582143024431,0.289562613335158,0.205476322550383,0.179060963239896,0.112085143993527,0.394061520403854,1.07813787429759,0.385029108839245,0.254094624222463,0,0,0.335032530668698,0.637938751653163,2.24702107184155,0,0.828831026872071,0,0.500170521059677,0,0.415941723061614,1.42743191037729,1.41932173530541,2.10854546986884,0.300946099727719,0,0,0,0.737476674166813,0.0868836144680828,0.391602314925481,0.343143423810856,0,1.07857100409308,0.213455115606889,1.21251028578504,0,0.604780586659361,0,2.30192959932094,0.280660094433074,0.384417447767103,0,0.804269605718038,0,0,0,0,0,0.232420756919918,0,0,0.276242966807689,0,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0,0,0.170093705276516,0.431831832204279,1.54227252690289,0,0,0,0,0.895499018888713,3.50815802633495,4.44440266742331,0,0.328014645699706,0,0.206082023295445,0.366277859273374,0.165018999841176,0,0.650060246036521,0,0.0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| |||
|short_description=p@chr7:48672353..48672374,+ | |||
}} |
Revision as of 17:00, 22 January 2014
Short description: | p@chr7:48672353..48672374, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:48672353..48672374, + |
Coexpression cluster: | C1360_skeletal_Monocytederived_Smooth_optic_Myoblast_acute_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.06e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-30 | 42 |
defensive cell | 1.27e-30 | 48 |
phagocyte | 1.27e-30 | 48 |
myeloid lineage restricted progenitor cell | 3.95e-26 | 66 |
granulocyte monocyte progenitor cell | 1.07e-25 | 67 |
myeloid leukocyte | 1.87e-24 | 72 |
macrophage dendritic cell progenitor | 5.09e-24 | 61 |
monopoietic cell | 3.01e-22 | 59 |
monocyte | 3.01e-22 | 59 |
monoblast | 3.01e-22 | 59 |
promonocyte | 3.01e-22 | 59 |
myeloid cell | 2.65e-21 | 108 |
common myeloid progenitor | 2.65e-21 | 108 |
leukocyte | 5.25e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 6.71e-10 | 120 |
hematopoietic oligopotent progenitor cell | 3.96e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.96e-09 | 161 |
hematopoietic stem cell | 2.26e-08 | 168 |
hematopoietic cell | 4.37e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.25e-23 | 76 |
bone element | 2.71e-20 | 82 |
skeletal element | 1.84e-18 | 90 |
immune system | 7.38e-18 | 93 |
skeletal system | 3.70e-16 | 100 |
hematopoietic system | 1.23e-15 | 98 |
blood island | 1.23e-15 | 98 |
hemolymphoid system | 2.58e-14 | 108 |
musculoskeletal system | 1.48e-13 | 167 |
lateral plate mesoderm | 1.74e-10 | 203 |