FFCP PHASE1:Hg19::chr7:75932978..75933029,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3315 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5246 | |||
|TSSclassifier=strong | |||
|UniProt=C9J3N8 | |||
|association_with_transcript=84bp_to_ENST00000429938,uc010ldj.1_5end | |||
|description=CAGE_peak_3_at_HSPB1_5end | |||
|id=chr7:75932978..75933029,+ | |||
|ontology_enrichment_celltype=CL:0000003!2.98e-20!722;CL:0000012!1.75e-15!682;CL:0000548!2.33e-14!679;CL:0000004!2.33e-14!679;CL:0000255!2.33e-14!679;CL:0000222!2.01e-13!119;CL:0000213!2.06e-12!57;CL:0000215!2.06e-12!57;CL:0000066!4.07e-12!254;CL:0000144!5.00e-09!625;CL:0002078!6.33e-09!44;CL:0000115!2.97e-08!35;CL:0000063!9.05e-08!578;CL:0000071!1.67e-07!18;CL:0002546!1.67e-07!18;CL:0002139!2.24e-07!24;CL:0000084!2.97e-07!25;CL:0000827!2.97e-07!25;CL:1000449!3.01e-07!16;CL:0000220!3.81e-07!246;CL:0000076!5.98e-07!62;CL:1000497!6.21e-07!18;CL:0002518!6.21e-07!18;CL:0002321!6.55e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:1000449;9.53e-08;15!CL:0000071;1.70e-07;18!CL:0000213;1.77e-07;58!CL:0000215;1.77e-07;58!CL:0002139;2.30e-07;24!CL:0000115;2.37e-07;36!CL:1000497;2.42e-07;17!CL:0002518;2.42e-07;17!CL:0000084;2.82e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.12e-13,121;CL:0000213,6.77e-13,58;CL:0000215,6.77e-13,58;CL:0000066,3.38e-12,253;CL:0002078,2.20e-09,45;CL:0000115,9.95e-09,36;CL:1000449,9.33e-08,15;CL:0000071,1.67e-07,18;CL:0002546,1.67e-07,18;CL:0002139,2.23e-07,24;CL:1000497,2.28e-07,17;CL:0002518,2.28e-07,17;CL:0000084,2.96e-07,25;CL:0000827,2.96e-07,25;CL:0002321,4.20e-07,250;CL:0000076,4.42e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.70e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000487!1.55e-07!22;UBERON:0001986!1.67e-07!18;UBERON:0004638!1.67e-07!18;UBERON:0004852!1.67e-07!18;UBERON:0004211!3.01e-07!16;UBERON:0001285!3.01e-07!16;UBERON:0007684!3.01e-07!16;UBERON:0003220!3.01e-07!16;UBERON:0004208!3.01e-07!16;UBERON:0006914!5.68e-07!25;UBERON:0001851!6.65e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;9.53e-08;15!UBERON:0004819;9.53e-08;15!UBERON:0001285;9.53e-08;15!UBERON:0007684;9.53e-08;15!UBERON:0000487;1.56e-07;22!UBERON:0004638;1.70e-07;18!UBERON:0001986;1.70e-07;18!UBERON:0004852;1.70e-07;18!UBERON:0001851;2.28e-07;15!UBERON:0006914;5.55e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,9.33e-08,15;UBERON:0009773,9.33e-08,15;UBERON:0001231,9.33e-08,15;UBERON:0001285,9.33e-08,15;UBERON:0007684,9.33e-08,15;UBERON:0004208,9.33e-08,15;UBERON:0000487,1.55e-07,22;UBERON:0004638,1.67e-07,18;UBERON:0001986,1.67e-07,18;UBERON:0004852,1.67e-07,18;UBERON:0001851,2.19e-07,15;UBERON:0006914,5.68e-07,25;UBERON:0002049,6.11e-07,78;UBERON:0007798,6.11e-07,78;UBERON:0004535,7.82e-07,109;UBERON:0006555,7.86e-07,16;UBERON:0004819,7.86e-07,16 | |||
|phase1_expression=16.3510541343501,21.8382534368803,18.3240725324763,14.0102617694383,23.241976910219,29.6595098194125,50.6599756336621,24.6370750636464,28.2080478455826,63.3993556173893,106.763578699781,49.5861914735491,32.4433383220998,43.4419898889764,41.7560693417174,27.5653310045228,39.7778388495825,37.245814609756,33.667363116545,64.6385554903136,56.7121921659023,42.3163873995419,32.3446665458094,40.7885786717195,26.6150395940982,28.5022003439858,24.9585791927835,27.7849058037288,25.5686779951788,14.2016877295969,13.9334510984468,34.0185853057203,30.4217977966033,34.0173689353445,107.447007204878,0,108.632162553893,19.3898392986157,16.6451891400218,19.5309783644267,17.689322464954,13.2796403067782,18.2878653020272,8.57849608799432,11.3362783106643,10.6736986922639,8.83230340241602,12.7462045286766,8.6717783850629,9.78154133895312,14.3449995656296,15.8443094025352,10.3423704220986,16.1371170895957,12.1883837934908,8.65914761895982,12.2807767526031,10.3372802844739,6.42776173978895,10.9115869205872,7.03270838378945,6.92687730392104,17.9517291859469,9.80316926225197,7.83564944297177,9.07816359505824,7.4738669879469,8.79370328398601,16.1659704710262,10.8594422352558,7.87019353423379,12.5214396235772,10.1267963981083,38.8709726813973,34.6545008943021,33.5453832813401,16.5123087785348,16.5194582125657,14.6260283894343,53.2973830796135,30.832084965859,40.1861138282195,36.9592113368778,30.0376236194172,29.3538053774973,21.7632413508919,23.6233632351247,18.3920780785435,27.7638846569642,26.7135051269902,23.9069447025968,23.4894875748376,20.6427543187624,81.946223718996,49.8852621053567,76.9081527543225,80.2575862064439,78.602152549833,60.8580437038547,59.6855788544721,128.087450787001,138.246759274542,105.206433340272,35.6513462032555,52.439851530521,62.6940921671648,51.452734115353,34.8408389653836,30.0437092863319,55.2511359468352,63.2841540729593,68.9731344049425,115.960092392731,135.375659013395,110.807655233275,38.2985578317774,108.834620182946,99.9955866354453,81.4723408302799,87.6054889391266,76.176764101201,94.094752400389,85.8278178743305,95.2220386988873,96.1966594453063,76.0054979061294,75.5437757167363,33.869932861755,32.0928234940209,53.29538062887,26.8187552945358,41.5834533016254,26.4675503016108,17.3490793144592,22.0588680679791,31.8662341713812,21.4727205703797,21.411934293316,47.8346174850183,47.0066322620636,40.4918362045311,13.2943761630178,94.3524796677684,70.0782596862572,5.19275829847493,6.61693001737215,12.8969221703299,20.7486843145648,31.459720092907,34.17409012232,61.6163462836786,89.4643978910369,95.4636379420884,72.3594165662732,102.357862435217,60.8010872687549,38.2460788762363,32.5605116553354,40.9131202089717,41.5053559828191,52.3678112241891,62.342312668918,43.6871083011223,65.0763652212188,52.6592266123144,66.7068970282076,74.7682810845145,84.6838333234583,68.9924868596475,63.6007991910646,73.8303028039541,1.31780417436063,0,67.5945780820928,7.9515512271251,27.6054515428784,7.54732330635347,4.58938593198102,32.6294911622488,32.5193008082538,21.349799145941,43.9068236182545,22.7184055841829,23.8437889563348,17.9808093424805,44.6504411552548,23.62321290368,93.9628941653524,38.7078495269597,55.3357666898116,25.2568270132544,35.9349565849921,32.05084298489,30.0564726342812,45.1180718473314,39.9211531263246,44.2234343432276,21.384051431077,25.4684937156914,137.434365652642,117.853375257863,43.9357257420113,51.1734746276333,49.8715407871529,38.1910530166329,21.7606335017304,19.380709598951,20.9849538846039,4.12596162084383,27.5489031575952,21.8289858194349,6.00182192168805,29.0608132452398,1.8034837803194,29.5925801567228,3.37552664482532,14.4206767638574,1.26216887122057,22.7363249646479,20.5290492159891,5.68015348026583,18.0346255827476,24.7558464773312,18.7463027568398,24.0016586119934,22.3707584403423,19.6377666868649,19.4818759432583,22.8902067452951,24.6713310936582,23.4658391314334,18.6138453128673,25.0319251727706,28.9458422186798,15.1948413487729,16.2528774811193,44.0346483818447,88.1385660296837,86.6525307001443,92.5482354752571,84.0440072220842,85.4087420842232,84.7056110226615,96.1347227181972,94.9711891206675,105.805468160257,78.9826336448374,54.6942917833439,35.8069389858318,23.5213938216867,10.1404027857465,29.4848165003288,18.9052770138049,64.453612514539,6.14942192715568,60.735004845678,41.5953581698691,35.9685610424383,35.5872562337173,31.9430135796927,63.5326195355133,53.0366740492585,70.7223575923839,73.0361551342984,32.0525735263793,49.3733251342872,44.4466092073546,29.6796477485973,140.656382836751,163.970856960121,16.742756413943,8.42415354501256,19.3220510975347,32.8068418953719,23.6854800760392,30.6234210043555,21.9418380621978,20.3443756959773,21.852812712417,77.3481283496631,41.9991030243088,47.8927946899183,33.8681890529859,46.7097003677606,25.0816682454068,33.6149814491284,30.4765362746122,42.7681115056763,25.3983906977209,16.5188681814155,37.4432626746057,56.8504597630979,60.1624894989927,39.676012629134,25.0787128570089,157.368836174828,29.58559633946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| |||
|short_description=p3@HSPB1 | |||
}} |
Revision as of 17:27, 22 January 2014
Short description: | p3@HSPB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HSPB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 84bp_to_ENST00000429938, uc010ldj.1_5end |
EntrezGene: | HSPB1 |
HGNC: | 5246 |
UniProt: | C9J3N8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.12e-13 | 121 |
lining cell | 6.77e-13 | 58 |
barrier cell | 6.77e-13 | 58 |
epithelial cell | 3.38e-12 | 253 |
meso-epithelial cell | 2.20e-09 | 45 |
endothelial cell | 9.95e-09 | 36 |
epithelial cell of nephron | 9.33e-08 | 15 |
blood vessel endothelial cell | 1.67e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.67e-07 | 18 |
endothelial cell of vascular tree | 2.23e-07 | 24 |
kidney cell | 2.28e-07 | 17 |
kidney epithelial cell | 2.28e-07 | 17 |
T cell | 2.96e-07 | 25 |
pro-T cell | 2.96e-07 | 25 |
embryonic cell | 4.20e-07 | 250 |
squamous epithelial cell | 4.42e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 9.33e-08 | 15 |
renal tubule | 9.33e-08 | 15 |
nephron tubule | 9.33e-08 | 15 |
nephron | 9.33e-08 | 15 |
uriniferous tubule | 9.33e-08 | 15 |
nephrogenic mesenchyme | 9.33e-08 | 15 |
simple squamous epithelium | 1.55e-07 | 22 |
blood vessel endothelium | 1.67e-07 | 18 |
endothelium | 1.67e-07 | 18 |
cardiovascular system endothelium | 1.67e-07 | 18 |
cortex | 2.19e-07 | 15 |
squamous epithelium | 5.68e-07 | 25 |
vasculature | 6.11e-07 | 78 |
vascular system | 6.11e-07 | 78 |
cardiovascular system | 7.82e-07 | 109 |
excretory tube | 7.86e-07 | 16 |
kidney epithelium | 7.86e-07 | 16 |