FFCP PHASE1:Hg19::chr7:115897949..115897975,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=26136 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=14620 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-371bp_to_AF147329_5end | |||
|coexpression_cluster_id=C1983 | |||
|description=CAGE_peak_5_at_TES_5end | |||
|id=chr7:115897949..115897975,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.58e-20!42;CL:0000860!1.89e-18!45;CL:0002009!1.43e-11!65;CL:0002194!2.94e-11!63;CL:0000576!2.94e-11!63;CL:0000040!2.94e-11!63;CL:0000559!2.94e-11!63;CL:0002087!9.50e-11!119;CL:0002031!1.41e-09!124;CL:0000557!3.07e-09!71;CL:0000839!1.66e-08!70;CL:0000738!2.54e-08!140;CL:0000766!4.32e-08!76;CL:0000063!2.38e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.95e-37;33!CL:0002057;6.95e-37;33!CL:0000473;2.06e-25;39!CL:0000234;2.06e-25;39!CL:0000576;3.68e-19;48!CL:0000766;5.98e-11;69!CL:0002087;8.06e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.23e-36,42;CL:0002057,8.23e-36,42;CL:0000473,6.14e-32,48;CL:0000234,6.14e-32,48;CL:0002194,2.27e-23,59;CL:0000576,2.27e-23,59;CL:0000040,2.27e-23,59;CL:0000559,2.27e-23,59;CL:0002009,2.84e-22,61;CL:0000839,7.94e-20,66;CL:0000557,2.21e-19,67;CL:0000766,8.32e-19,72;CL:0002087,1.24e-13,115;CL:0002031,1.36e-12,120;CL:0000738,2.55e-11,136;CL:0000763,9.63e-11,108;CL:0000049,9.63e-11,108;CL:0002032,2.19e-08,161;CL:0000837,2.19e-08,161;CL:0000037,1.35e-07,168;CL:0000988,3.72e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-26;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.93e-08!80;UBERON:0002390!1.87e-07!102;UBERON:0003061!1.87e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.54e-17,76;UBERON:0001474,2.54e-15,82;UBERON:0004765,4.37e-15,90;UBERON:0002390,4.71e-14,98;UBERON:0003061,4.71e-14,98;UBERON:0001434,2.05e-13,100;UBERON:0002405,2.65e-13,93;UBERON:0002193,1.18e-12,108;UBERON:0003081,1.61e-10,203;UBERON:0004871,5.32e-08,8;UBERON:0002204,3.61e-07,167;UBERON:0005631,3.66e-07,14;UBERON:0000158,3.66e-07,14 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.140954404095971,3.00219895059391,0.446961094427288,0,0,0.631719873426831,0,0.245733936501509,0.697801167972428,3.27662058195258,1.58260186937072,0.495065411840187,1.32558950291166,1.34465029290355,0,2.92124036154949,0.975865597581014,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,0,0,0,0.426507697462265,0.293600439334847,0.553995408531877,0.200544447470142,0.868043482863407,0,0,0.257575567634187,2.03557534291391,4.1566353805769,2.18325655069035,2.32429036905685,2.05583944010913,2.47765096716083,3.74000110018796,2.0492856522328,2.12834006899727,2.06847408441971,1.93645405075148,2.70852973188684,3.20011977222428,2.72906150057846,2.9214052977861,3.06083892370903,1.92557416245656,1.27867425159808,0.989553900560148,2.39356389145958,0.852449501065388,4.93355705668593,1.70215567407342,4.35975574296902,3.76872997885115,2.60741459210101,2.17188844705117,1.21079900526674,2.20966581592539,3.79754864929061,0,1.06302149982522,0.628975936525128,0.336985893439485,1.20141514273205,0.32145117339416,0.570025487482497,1.19350006319454,1.27864907635244,1.75996244461323,0.546138611262131,0.889509253863555,1.28019066769952,1.60158394814405,0.574752439954483,0,0.954053754535364,0,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0.205601498999509,0.334372990781356,0.32592226663359,0.473447805734733,0,0.668462741311041,0.294605907474837,0.443067789167242,0.541607727530031,0.512365278902701,0.780356085359269,0.657751618414705,0.552700035571697,0.869409257205157,0.296573126324121,0.535081656179426,2.09071047609954,0.679856056185397,0.383220493601921,0.68725489096526,0.253019692019503,0.95569624297229,0,0.950452044448374,0.301150238155546,0.383959833463255,1.24930726552346,1.18388626022008,0,0,0.534880391567015,0.289648807765598,0,0.670700859703636,0.383587685530591,0,1.50401373190767,0.434539556882471,1.5905718941022,0.486634870302636,0.378139268656271,0,0.351339142772504,0.196468613246569,0,0,0,0.348259474598534,0.664789802594326,0,0,0,0.198762407366705,0,0,0,0,1.10047216776027,0,0,0,0,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,1.3082821564276,0.993943903390637,1.64619665163954,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0.74000264525148,0,0.404132016209064,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0.122834317311768,0,0,0,0,0,1.17835279767846,0.125118519871964,0,0,0,0,1.13432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0.300091096084402,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.368199594569197,0.80823028409406,0.355009592516614,0.503760491138201,0.169560592310488,1.15956511897978,1.90922284413584,0.573609190778008,0.121973706129595,0,0.116193942869518,0.10366105501537,0.504641701751257,0.36497735907583,0,0.643240938192885,0,0.928735856063958,0,1.77460200059766,1.18009283054671,0.241011029883482,0.55146986366197,1.30727666455444,0.237270619111097,0.539325232640658,0.784885860501384,0.38474715694639,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.614942192715568,0.857839051492628,0.439001141634502,1.1240175325762,0.100528972411631,1.48141512253647,0.325808305310325,0,2.88662684050547,0.579652024875384,0.939269553886573,0.288732895522148,1.38895653772983,0.570762456703795,0,0.858486162094873,0,0.234004265139238,0.297262324577456,0,0.839910640994298,0.850650583454319,2.68675568108545,0.871901815541886,0.383382679165211,0,0.176096868026452,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0.300343057843917,0.285826432630578,0.112131084345361,0.87192013766656,0.1466765716419,0.646358578788889,0,0,0.531876233169741,0,0.257207374262142,0,0,0.428933980974443,0,0,0.65147236858747,0.355391948742546,0,1.80863626235752,0.871533458600294,0.499864955910285,1.2162378064119,0,0,0.718874566474748,1.14861935834114,0,0,0,0.179060963239896,0.896681151948218,0.788123040807709,1.50939302401662,0.898401253958239,0,0,0,0,0,0,2.99161459204025,0.414415513436035,0.736148950314839,0,1.35632511849868,0.831883446123229,2.14114786556594,1.10391690523754,0.234282829985426,0.601892199455438,0,0,0,0.184369168541703,0.695068915744663,0,0,0,0,0.426910231213777,1.21251028578504,3.32870879020994,1.81434175997808,0.496215615637554,1.2276957863045,0.561320188866147,0,0.511707249066704,0.64341568457443,1.48418066444991,0.308419387605311,0,0,0.519254429183621,0.464841513839837,1.45031339509947,1.40354529212299,1.01289087829486,1.14814448164607,0.546273504020151,0.655622074797121,0.451199612907412,0.924184045252977,0,0,1.05551628892876,0,0.340187410553031,1.0795795805107,0,0.270946437543853,0,0,0,0.223874754722178,0,0,1.28225062558195,0.328014645699706,0.650756789328606,0.103041011647722,0,0.165018999841176,0,0.650060246036521,1.6068392984416,0.290012154876366,0.770243085573222,1.07452572308291,0.275673144969061,0.322260734604821,0.2900333878284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| |||
|short_description=p5@TES | |||
}} |
Revision as of 18:55, 22 January 2014
Short description: | p5@TES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_5_at_TES_5end |
Coexpression cluster: | C1983_gastric_CD14_squamous_amniotic_myeloma_Placental_Wilms |
Association with transcript: | -371bp_to_AF147329_5end |
EntrezGene: | TES |
HGNC: | 14620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.23e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.23e-36 | 42 |
defensive cell | 6.14e-32 | 48 |
phagocyte | 6.14e-32 | 48 |
monopoietic cell | 2.27e-23 | 59 |
monocyte | 2.27e-23 | 59 |
monoblast | 2.27e-23 | 59 |
promonocyte | 2.27e-23 | 59 |
macrophage dendritic cell progenitor | 2.84e-22 | 61 |
myeloid lineage restricted progenitor cell | 7.94e-20 | 66 |
granulocyte monocyte progenitor cell | 2.21e-19 | 67 |
myeloid leukocyte | 8.32e-19 | 72 |
nongranular leukocyte | 1.24e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 1.36e-12 | 120 |
leukocyte | 2.55e-11 | 136 |
myeloid cell | 9.63e-11 | 108 |
common myeloid progenitor | 9.63e-11 | 108 |
hematopoietic oligopotent progenitor cell | 2.19e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.19e-08 | 161 |
hematopoietic stem cell | 1.35e-07 | 168 |
hematopoietic cell | 3.72e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.54e-17 | 76 |
bone element | 2.54e-15 | 82 |
skeletal element | 4.37e-15 | 90 |
hematopoietic system | 4.71e-14 | 98 |
blood island | 4.71e-14 | 98 |
skeletal system | 2.05e-13 | 100 |
immune system | 2.65e-13 | 93 |
hemolymphoid system | 1.18e-12 | 108 |
lateral plate mesoderm | 1.61e-10 | 203 |
somatic layer of lateral plate mesoderm | 5.32e-08 | 8 |
musculoskeletal system | 3.61e-07 | 167 |
extraembryonic membrane | 3.66e-07 | 14 |
membranous layer | 3.66e-07 | 14 |