FFCP PHASE1:Hg19::chr8:23700350..23700367,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=6781 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11373 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-333bp_to_S50179_5end | |||
|coexpression_cluster_id=C960 | |||
|description=CAGE_peak_9_at_STC1_5end | |||
|id=chr8:23700350..23700367,- | |||
|ontology_enrichment_celltype=CL:0000055!4.26e-14!180;CL:0000359!2.42e-09!32;CL:0000393!1.01e-07!60;CL:0000211!1.01e-07!60;CL:0000192!1.04e-07!42;CL:0000514!1.04e-07!42;CL:0000187!2.11e-07!54;CL:0000680!3.60e-07!57;CL:0000056!3.60e-07!57;CL:0000355!3.60e-07!57;CL:0000183!8.56e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002582;1.60e-11;3!CL:0002561;9.00e-09;2!CL:0002539;1.49e-08;10!CL:0000134;1.90e-08;55!CL:0000048;3.16e-08;58!CL:0000723;1.19e-07;61!CL:0002595;1.98e-07;5!CL:0000359;2.02e-07;32!CL:0002559;2.95e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002582,1.90e-11,3;CL:0002561,7.63e-09,2;CL:0002539,1.24e-08,10;CL:0000359,1.55e-07,32;CL:0002595,2.08e-07,5;CL:0002559,2.93e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.21e-14!14;DOID:120!1.41e-10!27;DOID:193!2.15e-09!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.07e-29;14!DOID:120;6.28e-17;27!DOID:193;1.42e-15;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.19e-29,14;DOID:120,5.30e-17,27;DOID:193,1.21e-15,29 | |||
|ontology_enrichment_uberon=UBERON:0004290!4.80e-09!70;UBERON:0000992!8.07e-09!13;UBERON:0000914!2.24e-08!83;UBERON:0002329!2.24e-08!83;UBERON:0003077!2.24e-08!83;UBERON:0003059!2.24e-08!83;UBERON:0007282!2.24e-08!83;UBERON:0009618!2.24e-08!83;UBERON:0007285!2.24e-08!83;UBERON:0000486!2.91e-07!82;UBERON:0001134!6.64e-07!61;UBERON:0002036!6.64e-07!61;UBERON:0003082!6.64e-07!61;UBERON:0003134!8.77e-07!37;UBERON:0000474!8.77e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;3.71e-17;13!UBERON:0002119;2.95e-15;4!UBERON:0002118;3.24e-12;5!UBERON:0000991;4.38e-10;21!UBERON:0005933;9.00e-09;2!UBERON:0005942;9.00e-09;2!UBERON:0005932;9.00e-09;2!UBERON:0004237;1.49e-08;10!UBERON:0004695;1.49e-08;10!UBERON:0002111;1.49e-08;10!UBERON:0004178;1.49e-08;10!UBERON:0003834;1.98e-07;5!UBERON:0001533;1.98e-07;5!UBERON:0002073;2.95e-07;5!UBERON:0002067;7.61e-07;9!UBERON:0004573;9.25e-07;33!UBERON:0004571;9.25e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,3.44e-17,13;UBERON:0002119,4.87e-15,4;UBERON:0002118,1.97e-12,5;UBERON:0000991,4.19e-10,21;UBERON:0009196,4.19e-10,21;UBERON:0009117,4.19e-10,21;UBERON:0005564,4.19e-10,21;UBERON:0004176,1.40e-09,22;UBERON:0005933,7.63e-09,2;UBERON:0005942,7.63e-09,2;UBERON:0005932,7.63e-09,2;UBERON:0004237,1.24e-08,10;UBERON:0004695,1.24e-08,10;UBERON:0002111,1.24e-08,10;UBERON:0004178,1.24e-08,10;UBERON:0002329,5.90e-08,71;UBERON:0003059,5.90e-08,71;UBERON:0007282,5.90e-08,71;UBERON:0004290,5.90e-08,71;UBERON:0009618,5.90e-08,71;UBERON:0003077,8.44e-08,72;UBERON:0007285,8.44e-08,72;UBERON:0007524,1.20e-07,73;UBERON:0003834,2.08e-07,5;UBERON:0001533,2.08e-07,5;UBERON:0002199,2.67e-07,46;UBERON:0002416,2.67e-07,46;UBERON:0004573,2.92e-07,33;UBERON:0004571,2.92e-07,33;UBERON:0002073,2.93e-07,5;UBERON:0005086,2.93e-07,5;UBERON:0007503,5.92e-07,78;UBERON:0002067,8.44e-07,9;UBERON:0004016,8.44e-07,9;UBERON:0010083,8.44e-07,9 | |||
|phase1_expression=0.181678379270557,3.8538094300377,0.563817616383885,0,0,0.872338524100369,0,1.26343974685366,0,0.245733936501509,0,0.218441372130172,0,0,0,1.34465029290355,1.80808358407193,1.46062018077475,0.975865597581014,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,2.1686349143074,0,1.44846518960824,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.516833518338658,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.529636723252875,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0.234321431833797,3.1216007683032,2.2818872861778,4.93180645820944,0.117434498643765,0.485618833104395,0,1.22492502752936,0.245668634623536,0.413303124703062,0,0.741800787835671,0,0,0.336672227908132,0,0.554128230968366,0,0,1.80285670687916,0,0.179389635688862,0,1.27159140695737,0,0,0,0.18611685633159,0,0.194874010322397,0,0,0.323292113637624,0,0,0.169560592310488,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,1.28648187638577,0,4.64367928031979,2.88751792667834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,1.20097467208968,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.761974731506028,0,0,1.71072446022705,0,0,0,0.560655421726804,0.43596006883328,3.00686971865895,0,0,0.845302752556,0,1.04007436911366,0,0,0.266422179016099,0.285955987316295,0,0,0,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0.239624855491583,0,1.42636905040718,0,0.205476322550383,0,0,0,0,0,1.52456774533478,0,0,0.335032530668698,0,0,0,0,0.736148950314839,0.500170521059677,0.542530047399471,0.415941723061614,0,0,0.468565659970853,0,0,0,0.664225598535437,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0.256278298511402,0,0,0,2.31314540703983,0.887808626565635,1.31403449622095,5.71179872101983,1.27831416305955,0,0.200506470303285,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0.308061348417659,0,0,0,0,0.680374821106063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.193341436584244,0,0,0.275673144969061,0,0,0.170453254832202,0,0.165284915360978,0,0.127612712494584,0,0,2.83331112147576,0.6970372701606,0.308033580176089,1.06461206063404,0,0.9266210955196,0,0.372158369359667,0,0,0,0,0.318203247925937,1.56989728039846,0,0,0.117812402345686,0.404364963146632,0,0.842516912477962,0,3.1682753652067,0,0.272999822815972,0,0,0,2.65375590096488,2.19225442626881,0,0,0.202910376962704,0.6196469961995,0.563391205064483,0.143411352204052,0,0,0.709522128141196,0.633322905892992,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.71623345421307,0,0,0,0,0.890469640183247,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0.174919999992391,0,0,0,0.236387681767936,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.227884111694002,0,0,0,0,0,1.5991043280559,0,0,0,0,0,0,0,0,0.210998064528027,1.95879369790977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992975867626496,0,0,0.284609546029793,0.554698692052555,0,0,0,0,0,0,0,0,0,0,0.225980740780532,1.23337732182076,2.18586072873289,0,0,0,0,0,0,0,0,5.61813712153784,0.124252535565433,0.707082103850386,0.135904206073614,0.313808538937,0.407992870545287,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.550157746388935,0,0.449947783103001,0,0,0,0,0.0524545881349981,0,1.25501137532991,0,0,0,0,0.542999601753713,0.864221491201268,1.30634944043764,0,0.082092520749339,0,0.453248366080503,0.146552233678082,0,0,0.13223260174269,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,1.14186133417987,0.470531639396343,0.468334905806882,0,0.298509605773748,0.233713309847224,0,0.189403005275089,0,1.77962244319307,0.457680136793847,0.151230923763239,0.310874401165561,2.95710299979268,2.54874827461924,2.24901556081802,1.08684069813382,4.97647449409027,1.06336685823198,3.65221543268214,0.751288044986092,1.52322084867518,2.44122439922797,2.72772988803839,0.322231671127465,4.64033759878494,1.99047944349308,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0.512483037175893,0,0.303859956177382,0,0,0,0,0.327609848846413,0.983091635014877,0,0.19998739585493,0,0,0.567515953566836,0,0,0,0,0.107824811396682,0.471797825567689,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0.49131575253029,0,0,0,0.206686796501184,0,0.546974809018219,0,0.496211178389294,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0.514464028312255,0,0,0.354581522651905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30165200803622,1.36341447614652,0,0,0,0.955538938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| |||
|short_description=p9@STC1 | |||
}} |
Revision as of 21:13, 22 January 2014
Short description: | p9@STC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_9_at_STC1_5end |
Coexpression cluster: | C960_Preadipocyte_giant_Smooth_Fibroblast_fibrous_mesenchymal_Meningeal |
Association with transcript: | -333bp_to_S50179_5end |
EntrezGene: | STC1 |
HGNC: | 11373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
visceral preadipocyte | 1.90e-11 | 3 |
outer root sheath cell | 7.63e-09 | 2 |
aortic smooth muscle cell | 1.24e-08 | 10 |
vascular associated smooth muscle cell | 1.55e-07 | 32 |
smooth muscle cell of the subclavian artery | 2.08e-07 | 5 |
hair follicle cell | 2.93e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.19e-29 | 14 |
female reproductive organ cancer | 5.30e-17 | 27 |
reproductive organ cancer | 1.21e-15 | 29 |