FFCP PHASE1:Hg19::chr8:144874971..144874988,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C480 | |||
|description=CAGE_peak_at_chr8:144874971..144874988,- | |||
|id=chr8:144874971..144874988,- | |||
|ontology_enrichment_celltype=CL:0000188!1.11e-20!9;CL:0002575!7.89e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000188;5.38e-55;9!CL:0000228;5.71e-21;1!CL:0002372;5.71e-21;1!CL:0000680;3.15e-12;7!CL:0002575;1.82e-11;2!CL:0000632;7.02e-08;3!CL:0000594;7.02e-08;3!CL:0000187;8.57e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,6.02e-55,9;CL:0000228,5.16e-21,1;CL:0002372,5.16e-21,1;CL:0002575,1.82e-11,2;CL:0000187,3.60e-09,55;CL:0000680,1.06e-08,58;CL:0000056,1.06e-08,58;CL:0000355,1.06e-08,58;CL:0000393,2.83e-08,61;CL:0000211,2.83e-08,61;CL:0000632,6.34e-08,3;CL:0000594,7.76e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000355;1.91e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.40e-44;16!UBERON:0002036;2.40e-44;16!UBERON:0002385;2.65e-22;31!UBERON:0001015;2.65e-22;31!UBERON:0000383;2.65e-22;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.93e-11,62;UBERON:0002036,1.93e-11,62;UBERON:0003082,1.93e-11,62;UBERON:0002385,4.41e-11,64;UBERON:0001015,4.41e-11,64;UBERON:0000383,4.41e-11,64;UBERON:0002329,5.58e-10,71;UBERON:0003059,5.58e-10,71;UBERON:0007282,5.58e-10,71;UBERON:0004290,5.58e-10,71;UBERON:0009618,5.58e-10,71;UBERON:0003077,7.71e-10,72;UBERON:0007285,7.71e-10,72;UBERON:0007524,1.06e-09,73;UBERON:0007503,4.50e-09,78;UBERON:0000486,1.61e-08,83;UBERON:0000490,3.43e-08,148;UBERON:0005256,1.04e-07,122;UBERON:0003104,1.49e-07,160;UBERON:0009142,1.49e-07,160 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441175890929576,0,0,0,0,0,0,0,0,1.47008711385542,0,0.982827216677626,0,0,0.122988438543114,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,8.23544217146054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70678011217942,0.308097234229289,0.767518373630648,2.34322173223702,0,0.725083469571143,1.19317278382541,3.91740956845644,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0,0.782560276832555,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0.381382095467167,0,0,0.0752103283492573,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0.23248285073625,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.098150233615243,0.121917924982269,0,0,1.1598144313382,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:144874971..144874988,- | |||
}} |
Revision as of 00:21, 23 January 2014
Short description: | p@chr8:144874971..144874988, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:144874971..144874988, - |
Coexpression cluster: | C480_Pericytes_Skeletal_skeletal_mesenchymal_Hepatic_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 6.02e-55 | 9 |
multinucleate cell | 5.16e-21 | 1 |
myotube | 5.16e-21 | 1 |
central nervous system pericyte | 1.82e-11 | 2 |
muscle cell | 3.60e-09 | 55 |
muscle precursor cell | 1.06e-08 | 58 |
myoblast | 1.06e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.06e-08 | 58 |
electrically responsive cell | 2.83e-08 | 61 |
electrically active cell | 2.83e-08 | 61 |
hepatic stellate cell | 6.34e-08 | 3 |
skeletal muscle satellite cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.93e-11 | 62 |
striated muscle tissue | 1.93e-11 | 62 |
myotome | 1.93e-11 | 62 |
muscle tissue | 4.41e-11 | 64 |
musculature | 4.41e-11 | 64 |
musculature of body | 4.41e-11 | 64 |
somite | 5.58e-10 | 71 |
presomitic mesoderm | 5.58e-10 | 71 |
presumptive segmental plate | 5.58e-10 | 71 |
dermomyotome | 5.58e-10 | 71 |
trunk paraxial mesoderm | 5.58e-10 | 71 |
paraxial mesoderm | 7.71e-10 | 72 |
presumptive paraxial mesoderm | 7.71e-10 | 72 |
dense mesenchyme tissue | 1.06e-09 | 73 |
epithelial vesicle | 4.50e-09 | 78 |
multilaminar epithelium | 1.61e-08 | 83 |
unilaminar epithelium | 3.43e-08 | 148 |
trunk mesenchyme | 1.04e-07 | 122 |
mesenchyme | 1.49e-07 | 160 |
entire embryonic mesenchyme | 1.49e-07 | 160 |