FFCP PHASE1:Hg19::chr9:135854074..135854089,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8328 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4238 | |||
|TSSclassifier=strong | |||
|UniProt=Q5VTD9 | |||
|association_with_transcript=-8bp_to_ENST00000450530,ENST00000534944,NM_001135031,NM_004188_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_2_at_GFI1B_5end | |||
|id=chr9:135854074..135854089,+ | |||
|ontology_enrichment_celltype=CL:0000037!5.53e-18!172;CL:0000566!5.53e-18!172;CL:0000988!1.48e-16!182;CL:0002032!1.94e-16!165;CL:0000837!1.94e-16!165;CL:0000763!4.76e-16!112;CL:0000049!4.76e-16!112;CL:0002274!1.09e-12!5;CL:0000457!1.09e-12!5;CL:0002191!1.09e-12!5;CL:0000097!1.09e-12!5;CL:0000831!1.09e-12!5;CL:0002028!1.09e-12!5;CL:0000764!1.30e-09!2;CL:0000765!1.30e-09!2;CL:0000050!1.30e-09!2;CL:0000038!1.30e-09!2;CL:0000558!1.30e-09!2;CL:0000547!1.30e-09!2;CL:0000549!1.30e-09!2;CL:0000550!1.30e-09!2;CL:0000552!1.30e-09!2;CL:0000785!4.71e-08!2;CL:0000955!4.71e-08!2;CL:0000818!4.71e-08!2;CL:0000954!4.71e-08!2;CL:0000816!4.71e-08!2;CL:0000163!4.57e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000764;7.07e-18;2!CL:0000558;7.07e-18;2!CL:0000763;1.42e-11;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,5.70e-29,108;CL:0000049,5.70e-29,108;CL:0002032,2.45e-18,161;CL:0000837,2.45e-18,161;CL:0000764,7.07e-18,2;CL:0000765,7.07e-18,2;CL:0000050,7.07e-18,2;CL:0000038,7.07e-18,2;CL:0000558,7.07e-18,2;CL:0000547,7.07e-18,2;CL:0000549,7.07e-18,2;CL:0000550,7.07e-18,2;CL:0000552,7.07e-18,2;CL:0000037,1.99e-17,168;CL:0000988,2.30e-16,177 | |||
|ontology_enrichment_development_v019=CL:0000049;1.75e-08;108 | |||
|ontology_enrichment_disease=DOID:8692!5.35e-34!31;DOID:2531!4.23e-29!51;DOID:0060083!4.23e-29!51;DOID:1240!3.96e-26!39;DOID:1036!1.15e-24!8;DOID:0050686!1.49e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.46e-69;31!DOID:1036;5.98e-49;8!DOID:1240;8.84e-44;39!DOID:2531;1.09e-28;51!DOID:0060083;1.09e-28;51!DOID:8552;1.69e-09;1!DOID:9119;3.53e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.28e-71,31;DOID:1240,3.81e-56,39;DOID:1036,5.57e-49,8;DOID:2531,2.97e-42,51;DOID:0060083,2.97e-42,51;DOID:0050686,1.03e-13,137;DOID:8552,1.56e-09,1;DOID:9119,3.83e-09,1;DOID:162,9.76e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.36e-11!15;UBERON:0000179!1.36e-11!15;UBERON:0000463!1.36e-11!15;UBERON:0000341!2.59e-08!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.53106578027662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99364675644969,0.829312462163088,0.576479813667846,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.6386864476942,47.319816635507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,0,0.540031437238115,2.37937552888281,0,0,0,0,0,0,0,1.1974762285969,1.1490322207942,2.32840940996271,0,0,0,0,0,2.37008488922245,0,0,0,0,0,0,0,0,5.56812347790485,28.3101017579738,7.03184764037556,2.33150377598474,5.63948020351398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56980256395025,6.64846727600626,6.54227415789824,6.27400109816767,8.55890093576798,7.96965677441577,13.3506726343518,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,7.22414182594183,0,0,0,5.30027555648885,0,0,0,0,0.213574825135389,0.314408610199332,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,2.19156819110162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0.31037357147929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@GFI1B | |||
}} |
Revision as of 03:52, 23 January 2014
Short description: | p2@GFI1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GFI1B_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -8bp_to_ENST00000450530, ENST00000534944, NM_001135031, NM_004188_5end |
EntrezGene: | GFI1B |
HGNC: | 4238 |
UniProt: | Q5VTD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 5.70e-29 | 108 |
common myeloid progenitor | 5.70e-29 | 108 |
hematopoietic oligopotent progenitor cell | 2.45e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.45e-18 | 161 |
erythroid lineage cell | 7.07e-18 | 2 |
erythroblast | 7.07e-18 | 2 |
megakaryocyte-erythroid progenitor cell | 7.07e-18 | 2 |
erythroid progenitor cell | 7.07e-18 | 2 |
reticulocyte | 7.07e-18 | 2 |
proerythroblast | 7.07e-18 | 2 |
basophilic erythroblast | 7.07e-18 | 2 |
polychromatophilic erythroblast | 7.07e-18 | 2 |
orthochromatic erythroblast | 7.07e-18 | 2 |
hematopoietic stem cell | 1.99e-17 | 168 |
hematopoietic cell | 2.30e-16 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.28e-71 | 31 |
leukemia | 3.81e-56 | 39 |
chronic leukemia | 5.57e-49 | 8 |
hematologic cancer | 2.97e-42 | 51 |
immune system cancer | 2.97e-42 | 51 |
organ system cancer | 1.03e-13 | 137 |
chronic myeloid leukemia | 1.56e-09 | 1 |
acute myeloid leukemia | 3.83e-09 | 1 |
cancer | 9.76e-07 | 235 |