FFCP PHASE1:Mm9::chr3:89153890..89153923,-: Difference between revisions
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{{FFCP|EntrezGene=11490|HGNC=|MCL_coexpression_id=38|UniProt=O88839|association_with_transcript=0bp_to_ENSMUST00000029676,ENSMUST00000074582,ENSMUST00000107448,ENSMUST00000134839,ENSMUST00000153311,ENSMUST00000171232_5end|description=CAGE_peak_1_at_Adam15_5end|id=chr3:89153890..89153923,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.96e-08!73;UBERON:0005743!8.96e-08!73;UBERON:0000073!1.97e-07!75;UBERON:0001016!1.97e-07!75;UBERON:0000955!2.47e-07!50;UBERON:0006238!2.47e-07!50;UBERON:0001049!2.94e-07!52;UBERON:0005068!2.94e-07!52;UBERON:0006241!2.94e-07!52;UBERON:0007135!2.94e-07!52;UBERON:0004121!3.39e-07!102;UBERON:0000924!3.39e-07!102;UBERON:0006601!3.39e-07!102;UBERON:0002616!4.09e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.53e-08,54;UBERON:0001017,8.96e-08,73;UBERON:0001016,1.97e-07,75;UBERON:0001049,2.94e-07,52;UBERON:0005068,2.94e-07,52;UBERON:0006241,2.94e-07,52;UBERON:0007135,2.94e-07,52;UBERON:0004121,3.95e-07,95;UBERON:0000924,3.95e-07,95;UBERON:0006601,3.95e-07,95|phase1_expression=22.2606897475664,12.2141392673776,14.1049764210756,27.8267074402284,37.0662840160297,11.4157904900085,11.4470193891808,5.29405626110463,4.50523910885334,5.14941957908386,1.36974374580404,2.6324812468461,4.45121897821135,5.33264454755884,7.66152452176024,4.656931149966,0,1.73504190947031,2.74228867211478,1.69755860719212,36.2284416043557,7.04965753526286,13.8435888243636,7.99962113967033,8.48814339948529,8.03924749761028,5.59990595006797,7.54149314400612,19.1923653650938,10.5852654499171,7.98229838359097,1.27006134691926,1.84519436275371,0,6.35473563452804,10.140313366868,11.0251452381679,59.4314915646409,45.3174499823804,34.5525671022707,57.0584543390084,53.2775478267588,43.6959317728038,78.4337175987847,79.986398732197,50.1082633401391,341.905017480093,51.8899872185463,102.154074971529,106.353154793633,112.689069408417,86.2515386189829,1.17447824240415,4.35217285206807,1.68046899571232,101.102958362127,124.068979493482,144.388185837684,18.0061650165042,30.1524858185059,34.8607271928399,137.909724552137,228.548762600563,560.187574007671,745.605237375499,731.084038279537,310.685314607586,233.988947940827,12.3390638647088,11.340498819862,14.302097371894,60.8436596780102,56.7632150245647,9.79926393719632,5.36734637702124,19.3035945188104,123.329786719315,79.6768989651571,80.0290038265028,16.8814448294648,12.8997577479398,15.6274011167028,79.5671547153936,70.9080888639917,70.7455887206631,59.5149742656809,43.7081060053246,25.1639251864156,13.3278100266404,27.2057616384428,108.699183263129,25.8127163094416,0,1.61910957491345,2.59910566979068,3.13618820968135,25.7013288841106,54.7081335475565,41.3059747318561,62.8944442628406,12.5350643601246,59.0301796105862,56.0571527354621,49.7746692207332,17.1027922398859,17.7351905832569,17.6933555755174,19.1828917928021,11.1343289968284,46.610831666355,21.1652098654686,26.7929620914684,26.5207821844467,20.347556474604,29.0444106625191,31.1653146497595,31.1465659345311,63.1899189740014,41.5766959416441,39.3093445372204,31.5803371398363,19.8798853785441,46.5979403045305,40.4037499875935,39.3759808809296,20.4365644166873,18.6911594229236,23.3962065087429,25.0328347333937,67.4057877321702,58.5600771607842,19.7277332817197,58.4049715846049,50.6316605514054,67.3233264372975,64.8965052271031,38.2916008077189,36.9488702711976,40.6883641078216,33.8811387977223,11.3204785377552,12.4147136394075,14.5850325142333,17.1803492332715,19.3904022581284,16.7828973573153,21.1765897504987,27.4225572983357,6.89817577385095,10.9681526497335,15.8356011747554,23.4539433697505,32.531528159395,52.237824978325,57.4132160578162,13.733364410476,35.1106593656617,26.5068344328157,28.7005134389549,16.1558102577691,17.12040237862,20.5270750065557,21.5437709382541,22.431122419204,22.6772655944446,21.8581908065383,35.948635787549,36.1972561338225,31.5954911833882,44.6535502295139,49.6141114420637,50.8775956240156,59.7176313591658,64.4190810049785,69.8162629232902,23.153537785339,15.1992640172547,17.1892868331304,8.10495352033889,13.7019636397659,21.1342636568233,16.3363654944907,15.5664630691409,20.7345932462689,17.5575752771469,20.4226703857773,19.604146286421,25.068515477185,29.4395771549871,25.1669434423182,25.5042898852139,23.8969527905241,20.6738012038859,19.1937501184344,27.0498565615393,26.4746726198908,29.6747305366467,35.9095397838431,36.2345357721994,30.1124701878388,36.2667061313576,48.3716882573458,5.03969466048153,7.50802975722423,8.64859578498093,4.49724224769707,6.49152388443209,8.92355491083942,8.40265310878685,11.2201493605816,6.97181475132652,8.51140380883053,10.0637744569148,15.2577788544086,10.9213185590096,12.3763650194085,8.61107584905178,6.27176577772377,76.3030675388077,14.2118558827864,15.1557428091084,17.144253663294,25.1118565668697,29.4811013097596,43.0858990003685,73.1751179466746,46.9752729436449,57.8022839983303,60.5928120898451,56.0412536327824,58.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11490 | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O88839 | |||
|association_with_transcript=0bp_to_ENSMUST00000029676,ENSMUST00000074582,ENSMUST00000107448,ENSMUST00000134839,ENSMUST00000153311,ENSMUST00000171232_5end | |||
|cluster_id=chr3:89153890..89153923,- | |||
|description=CAGE_peak_1_at_Adam15_5end | |||
|id=chr3:89153890..89153923,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.96e-08!73;UBERON:0005743!8.96e-08!73;UBERON:0000073!1.97e-07!75;UBERON:0001016!1.97e-07!75;UBERON:0000955!2.47e-07!50;UBERON:0006238!2.47e-07!50;UBERON:0001049!2.94e-07!52;UBERON:0005068!2.94e-07!52;UBERON:0006241!2.94e-07!52;UBERON:0007135!2.94e-07!52;UBERON:0004121!3.39e-07!102;UBERON:0000924!3.39e-07!102;UBERON:0006601!3.39e-07!102;UBERON:0002616!4.09e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.53e-08,54;UBERON:0001017,8.96e-08,73;UBERON:0001016,1.97e-07,75;UBERON:0001049,2.94e-07,52;UBERON:0005068,2.94e-07,52;UBERON:0006241,2.94e-07,52;UBERON:0007135,2.94e-07,52;UBERON:0004121,3.95e-07,95;UBERON:0000924,3.95e-07,95;UBERON:0006601,3.95e-07,95 | |||
|phase1_expression=22.2606897475664,12.2141392673776,14.1049764210756,27.8267074402284,37.0662840160297,11.4157904900085,11.4470193891808,5.29405626110463,4.50523910885334,5.14941957908386,1.36974374580404,2.6324812468461,4.45121897821135,5.33264454755884,7.66152452176024,4.656931149966,0,1.73504190947031,2.74228867211478,1.69755860719212,36.2284416043557,7.04965753526286,13.8435888243636,7.99962113967033,8.48814339948529,8.03924749761028,5.59990595006797,7.54149314400612,19.1923653650938,10.5852654499171,7.98229838359097,1.27006134691926,1.84519436275371,0,6.35473563452804,10.140313366868,11.0251452381679,59.4314915646409,45.3174499823804,34.5525671022707,57.0584543390084,53.2775478267588,43.6959317728038,78.4337175987847,79.986398732197,50.1082633401391,341.905017480093,51.8899872185463,102.154074971529,106.353154793633,112.689069408417,86.2515386189829,1.17447824240415,4.35217285206807,1.68046899571232,101.102958362127,124.068979493482,144.388185837684,18.0061650165042,30.1524858185059,34.8607271928399,137.909724552137,228.548762600563,560.187574007671,745.605237375499,731.084038279537,310.685314607586,233.988947940827,12.3390638647088,11.340498819862,14.302097371894,60.8436596780102,56.7632150245647,9.79926393719632,5.36734637702124,19.3035945188104,123.329786719315,79.6768989651571,80.0290038265028,16.8814448294648,12.8997577479398,15.6274011167028,79.5671547153936,70.9080888639917,70.7455887206631,59.5149742656809,43.7081060053246,25.1639251864156,13.3278100266404,27.2057616384428,108.699183263129,25.8127163094416,0,1.61910957491345,2.59910566979068,3.13618820968135,25.7013288841106,54.7081335475565,41.3059747318561,62.8944442628406,12.5350643601246,59.0301796105862,56.0571527354621,49.7746692207332,17.1027922398859,17.7351905832569,17.6933555755174,19.1828917928021,11.1343289968284,46.610831666355,21.1652098654686,26.7929620914684,26.5207821844467,20.347556474604,29.0444106625191,31.1653146497595,31.1465659345311,63.1899189740014,41.5766959416441,39.3093445372204,31.5803371398363,19.8798853785441,46.5979403045305,40.4037499875935,39.3759808809296,20.4365644166873,18.6911594229236,23.3962065087429,25.0328347333937,67.4057877321702,58.5600771607842,19.7277332817197,58.4049715846049,50.6316605514054,67.3233264372975,64.8965052271031,38.2916008077189,36.9488702711976,40.6883641078216,33.8811387977223,11.3204785377552,12.4147136394075,14.5850325142333,17.1803492332715,19.3904022581284,16.7828973573153,21.1765897504987,27.4225572983357,6.89817577385095,10.9681526497335,15.8356011747554,23.4539433697505,32.531528159395,52.237824978325,57.4132160578162,13.733364410476,35.1106593656617,26.5068344328157,28.7005134389549,16.1558102577691,17.12040237862,20.5270750065557,21.5437709382541,22.431122419204,22.6772655944446,21.8581908065383,35.948635787549,36.1972561338225,31.5954911833882,44.6535502295139,49.6141114420637,50.8775956240156,59.7176313591658,64.4190810049785,69.8162629232902,23.153537785339,15.1992640172547,17.1892868331304,8.10495352033889,13.7019636397659,21.1342636568233,16.3363654944907,15.5664630691409,20.7345932462689,17.5575752771469,20.4226703857773,19.604146286421,25.068515477185,29.4395771549871,25.1669434423182,25.5042898852139,23.8969527905241,20.6738012038859,19.1937501184344,27.0498565615393,26.4746726198908,29.6747305366467,35.9095397838431,36.2345357721994,30.1124701878388,36.2667061313576,48.3716882573458,5.03969466048153,7.50802975722423,8.64859578498093,4.49724224769707,6.49152388443209,8.92355491083942,8.40265310878685,11.2201493605816,6.97181475132652,8.51140380883053,10.0637744569148,15.2577788544086,10.9213185590096,12.3763650194085,8.61107584905178,6.27176577772377,76.3030675388077,14.2118558827864,15.1557428091084,17.144253663294,25.1118565668697,29.4811013097596,43.0858990003685,73.1751179466746,46.9752729436449,57.8022839983303,60.5928120898451,56.0412536327824,58.5402088525386,76.6640010482011,227.694838748301,258.899105497706,31.4729134732183,31.1808523324348,62.6147300952389,59.1919017290626,30.6558347854383,41.6577029887215,14.1978698737316,15.6175497718655,9.90947629570875,19.5954414321093,18.0466926006739,18.1168979704853,20.6453457854196,20.4579100537918,16.602086673754,46.2702695647402,42.8659057328971,39.1744328067961,33.2289397081295,49.3260667687881,29.2039304347918,10.9251286269742,13.9068836203785,14.5225911412042,20.3758306087733,22.7502009478506,34.6293912845416,27.2650297108129,25.3113138653152,25.2829406348653,25.3004660579997,25.7838858120467,22.8094535855038,19.6266592494128,26.0010954403337,25.5061071687595,24.8276327099183,36.2088699732203,37.8462747384878,38.9715134866687,74.6256031642599,77.9542020778858,55.7936847079054,47.8170133530292,43.7568596345904,35.3433740078993,36.5279372649598,27.9039529566604,24.4843902769075,74.7263967102354,12.9861869406368,31.9899645342995,23.8900940306928,6.96963290917357,5.60446333656203,11.6676868335327,16.1479508494163,17.3539800881336,18.6569964635972,51.5522133728161,15.1841276918945,17.6887936400358,18.468913280528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| |||
|short_description=p1@Adam15 | |||
}} |
Revision as of 04:53, 4 August 2015
Short description: | p1@Adam15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Adam15_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | 0bp_to_ENSMUST00000029676, ENSMUST00000074582, ENSMUST00000107448, ENSMUST00000134839, ENSMUST00000153311, ENSMUST00000171232_5end |
EntrezGene: | 11490 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.53e-08 | 54 |
central nervous system | 8.96e-08 | 73 |
nervous system | 1.97e-07 | 75 |
neural tube | 2.94e-07 | 52 |
neural rod | 2.94e-07 | 52 |
future spinal cord | 2.94e-07 | 52 |
neural keel | 2.94e-07 | 52 |
ectoderm-derived structure | 3.95e-07 | 95 |
ectoderm | 3.95e-07 | 95 |
presumptive ectoderm | 3.95e-07 | 95 |