FFCP PHASE1:Mm9::chr11:85646427..85646451,+: Difference between revisions
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{{FFCP|EntrezGene=21385|HGNC=|MCL_coexpression_id=1092|UniProt=Q3UET7,Q60707|association_with_transcript=310bp_to_NM_009324,uc007ksb.1_5end|description=CAGE_peak_4_at_Tbx2_5end|id=chr11:85646427..85646451,+|ontology_enrichment_celltype=CL:0000107!6.21e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,7.83e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!8.66e-13!27;UBERON:0001008!3.22e-10!17;UBERON:0002048!4.84e-10!14;UBERON:0000117!4.84e-10!14;UBERON:0000171!4.84e-10!14;UBERON:0000170!4.84e-10!14;UBERON:0005597!4.84e-10!14;UBERON:0000118!4.84e-10!14;UBERON:0006554!1.22e-09!16;UBERON:0000464!1.79e-09!57;UBERON:0009569!5.48e-09!66;UBERON:0005178!5.79e-09!17;UBERON:0005181!5.79e-09!17;UBERON:0002224!5.79e-09!17;UBERON:0000915!5.79e-09!17;UBERON:0008947!5.79e-09!17;UBERON:0003258!5.79e-09!17;UBERON:0000468!6.72e-09!333;UBERON:0002113!8.29e-09!14;UBERON:0003918!8.29e-09!14;UBERON:0005095!8.29e-09!14;UBERON:0007687!8.29e-09!14;UBERON:0003064!5.72e-08!14;UBERON:0005153!9.44e-08!17;UBERON:0000010!1.53e-07!11;UBERON:0005177!3.25e-07!85;UBERON:0000922!4.13e-07!328;UBERON:0002410!6.21e-07!9;UBERON:0002100!9.96e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0005157,1.36e-11,20;UBERON:0002048,1.87e-11,14;UBERON:0000117,1.87e-11,14;UBERON:0000171,1.87e-11,14;UBERON:0000170,1.87e-11,14;UBERON:0005597,1.87e-11,14;UBERON:0000118,1.87e-11,14;UBERON:0001008,7.82e-11,19;UBERON:0006554,3.60e-10,18;UBERON:0002113,5.14e-10,14;UBERON:0003918,5.14e-10,14;UBERON:0011143,5.14e-10,14;UBERON:0005095,5.14e-10,14;UBERON:0007687,5.14e-10,14;UBERON:0005153,2.33e-09,17;UBERON:0005178,4.68e-09,17;UBERON:0005181,4.68e-09,17;UBERON:0002224,4.68e-09,17;UBERON:0000915,4.68e-09,17;UBERON:0008947,4.68e-09,17;UBERON:0003258,4.68e-09,17;UBERON:0003064,4.88e-09,14;UBERON:0000010,1.53e-08,11;UBERON:0005177,1.86e-08,79;UBERON:0009569,4.45e-08,66;UBERON:0002410,7.83e-08,9;UBERON:0002100,3.09e-07,90|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,1.80081605225163,1.14613375975503,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0.135005938331691,0.630974884054146,0,0.441737081903227,0,0.191690942036473,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,3.93776205332557,2.94729084416464,6.37701875143691,3.44169550792555,0,0,0,0.448026887097336,0.983110940922263,0,0,0,3.23939865486365,0,0,0,0.649473123033642,0.760079596425296,1.51657333504435,1.25602267690966,0,5.49235914539852,6.93941307064543,3.95805121805784,3.92046345335299,3.76806601381556,5.29149182110672,3.26733137457156,2.22475470960936,0.722996784599558,0,2.42650274921114,1.54589062922275,3.39412677194655,0,0,0,0.766371165625774,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,6.31404055871961,3.85661608891288,5.30717792710717,0.420883711772948,0.910843100738926,0.689706313300419,1.26043490863744,1.9591626318643,4.01415344992834,1.92170580427275,3.84177070694888,2.06962696591213,1.29340795759705,1.51284864134255,1.75951124163949,2.6303487891309,0.834141747676794,1.74126083261083,1.85203922767149,5.9710280045548,0,0,0,1.24275463521301,1.17263029990548,0.900310307305074,1.65721314909647,0.787056926989615,0.462801338662135,0.697601834251224,1.3413670069981,2.45207218971056,1.15191894939436,1.31333971263276,1.05389452409612,1.16959989940266,0.219550115291051,1.61047702512446,0,0.205809224758569,0,0,2.98603550749328,1.62565670302307,1.67527699718721,1.00841762311671,2.44615848229357,1.33157938278791,0.474529061544512,1.31759163779209,1.00534083520108,1.39269530428806,0.779856348476481,0.898819408654221,0.216138049874694,0.398282546508734,5.69003702859245,3.88444942873078,9.01661885384643,4.2766778847516,5.23671715352589,11.2918670023413,9.04282480876879,5.46157547524528,5.33795674660674,8.02081565491703,0,0.166845105716094,0,0,0,0.482354319504834,0.50925170356284,0.287696137450811,1.62135226775035,0.823684239564244,0,1.48856379067401,0.624075346229121,0.505157755894224,0.538192240565737,0.482443521363367,10.1614254591633,3.60033682363921,8.8001087278694,6.11082308790677,7.04070744865506,6.19773152534718,10.2358765580986,23.6111713907937,13.8718926813448,20.1532867580385,18.1778436269535,14.0922450655535,7.9435091658312,17.2132379711999,0,0,0,0,0.321101179975584,0.117211686592203,0.327869890753351,1.26235463602186,15.1443945319803,11.7131623288992,8.83235930704476,10.0366895140072,6.23836287430704,8.20921939287614,10.9298889452221,5.55286130031493,8.30104333687699,0,2.12910127812403,4.09550888434687,4.39794790254655,2.3095817216155,0,2.42780636154981,3.62788268357701,0.943025398779491,2.06711325016541,1.84461088766356,2.58428293168221,2.54473610634254,1.06949213515416,0,0,0,0.340439605753788,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21385 | |||
|HGNC= | |||
|MCL_coexpression_id=1092 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UET7,uniprot:Q60707 | |||
|association_with_transcript=310bp_to_NM_009324,uc007ksb.1_5end | |||
|cluster_id=chr11:85646427..85646451,+ | |||
|description=CAGE_peak_4_at_Tbx2_5end | |||
|id=chr11:85646427..85646451,+ | |||
|ontology_enrichment_celltype=CL:0000107!6.21e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,7.83e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!8.66e-13!27;UBERON:0001008!3.22e-10!17;UBERON:0002048!4.84e-10!14;UBERON:0000117!4.84e-10!14;UBERON:0000171!4.84e-10!14;UBERON:0000170!4.84e-10!14;UBERON:0005597!4.84e-10!14;UBERON:0000118!4.84e-10!14;UBERON:0006554!1.22e-09!16;UBERON:0000464!1.79e-09!57;UBERON:0009569!5.48e-09!66;UBERON:0005178!5.79e-09!17;UBERON:0005181!5.79e-09!17;UBERON:0002224!5.79e-09!17;UBERON:0000915!5.79e-09!17;UBERON:0008947!5.79e-09!17;UBERON:0003258!5.79e-09!17;UBERON:0000468!6.72e-09!333;UBERON:0002113!8.29e-09!14;UBERON:0003918!8.29e-09!14;UBERON:0005095!8.29e-09!14;UBERON:0007687!8.29e-09!14;UBERON:0003064!5.72e-08!14;UBERON:0005153!9.44e-08!17;UBERON:0000010!1.53e-07!11;UBERON:0005177!3.25e-07!85;UBERON:0000922!4.13e-07!328;UBERON:0002410!6.21e-07!9;UBERON:0002100!9.96e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005157,1.36e-11,20;UBERON:0002048,1.87e-11,14;UBERON:0000117,1.87e-11,14;UBERON:0000171,1.87e-11,14;UBERON:0000170,1.87e-11,14;UBERON:0005597,1.87e-11,14;UBERON:0000118,1.87e-11,14;UBERON:0001008,7.82e-11,19;UBERON:0006554,3.60e-10,18;UBERON:0002113,5.14e-10,14;UBERON:0003918,5.14e-10,14;UBERON:0011143,5.14e-10,14;UBERON:0005095,5.14e-10,14;UBERON:0007687,5.14e-10,14;UBERON:0005153,2.33e-09,17;UBERON:0005178,4.68e-09,17;UBERON:0005181,4.68e-09,17;UBERON:0002224,4.68e-09,17;UBERON:0000915,4.68e-09,17;UBERON:0008947,4.68e-09,17;UBERON:0003258,4.68e-09,17;UBERON:0003064,4.88e-09,14;UBERON:0000010,1.53e-08,11;UBERON:0005177,1.86e-08,79;UBERON:0009569,4.45e-08,66;UBERON:0002410,7.83e-08,9;UBERON:0002100,3.09e-07,90 | |||
|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,0,0.219686182734472,0.194429899074283,0.279972843250725,0,0,0,0,1.80081605225163,1.14613375975503,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0.599200221036809,0.384218305321555,0.103689612308478,0.135005938331691,0.630974884054146,0,0.441737081903227,0,0.191690942036473,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,3.93776205332557,2.94729084416464,6.37701875143691,3.44169550792555,0,0,0,0.448026887097336,0.983110940922263,0,0,0,3.23939865486365,0,0,0,0.649473123033642,0.760079596425296,1.51657333504435,1.25602267690966,0,5.49235914539852,6.93941307064543,3.95805121805784,3.92046345335299,3.76806601381556,5.29149182110672,3.26733137457156,2.22475470960936,0.722996784599558,0,2.42650274921114,1.54589062922275,3.39412677194655,0,0,0,0.766371165625774,0,0,0,0.149790639404823,0,0.125654352112864,0,0,0.20778804455956,0.162241263067758,6.31404055871961,3.85661608891288,5.30717792710717,0.420883711772948,0.910843100738926,0.689706313300419,1.26043490863744,1.9591626318643,4.01415344992834,1.92170580427275,3.84177070694888,2.06962696591213,1.29340795759705,1.51284864134255,1.75951124163949,2.6303487891309,0.834141747676794,1.74126083261083,1.85203922767149,5.9710280045548,0,0,0,1.24275463521301,1.17263029990548,0.900310307305074,1.65721314909647,0.787056926989615,0.462801338662135,0.697601834251224,1.3413670069981,2.45207218971056,1.15191894939436,1.31333971263276,1.05389452409612,1.16959989940266,0.219550115291051,1.61047702512446,0,0.205809224758569,0,0,2.98603550749328,1.62565670302307,1.67527699718721,1.00841762311671,2.44615848229357,1.33157938278791,0.474529061544512,1.31759163779209,1.00534083520108,1.39269530428806,0.779856348476481,0.898819408654221,0.216138049874694,0.398282546508734,5.69003702859245,3.88444942873078,9.01661885384643,4.2766778847516,5.23671715352589,11.2918670023413,9.04282480876879,5.46157547524528,5.33795674660674,8.02081565491703,0,0.166845105716094,0,0,0,0.482354319504834,0.50925170356284,0.287696137450811,1.62135226775035,0.823684239564244,0,1.48856379067401,0.624075346229121,0.505157755894224,0.538192240565737,0.482443521363367,10.1614254591633,3.60033682363921,8.8001087278694,6.11082308790677,7.04070744865506,6.19773152534718,10.2358765580986,23.6111713907937,13.8718926813448,20.1532867580385,18.1778436269535,14.0922450655535,7.9435091658312,17.2132379711999,0,0,0,0,0.321101179975584,0.117211686592203,0.327869890753351,1.26235463602186,15.1443945319803,11.7131623288992,8.83235930704476,10.0366895140072,6.23836287430704,8.20921939287614,10.9298889452221,5.55286130031493,8.30104333687699,0,2.12910127812403,4.09550888434687,4.39794790254655,2.3095817216155,0,2.42780636154981,3.62788268357701,0.943025398779491,2.06711325016541,1.84461088766356,2.58428293168221,2.54473610634254,1.06949213515416,0,0,0,0.340439605753788,1.62054984628179,1.94038025674132,0.428674070063185,0.532020700926821,0.891844088010353,1.81003922662333,3.65357938937519,0.704015124191131,2.54198485036584,2.42581237860458,0.49465875882444,0.484393280087717,0.965006798850494,0.119372344003136,0.492422699235184,0.582961673259701,0.18542530201051,0.170870880797853,0.619160603889667,0.555583582109135,0,0.27338845544205,0,0,0,0,1.90934123603023,1.73984796469624,2.43983360552218,1.62008011232702,1.46361807210128,2.18362563746178,3.2367443132357,2.14898984885873,1.30877970992015,0.259229946583586,3.10669656543463,0,5.08356256549528,3.97100377097034,3.88902376688095,4.1331143512874,4.56181538825101,5.04636126176742,1.43224823328345,1.25831213310853,0.483168241652012,0.864090018773596,0,1.82452693761148,0.718976700153791,0.389762468933385,0.179026695667481,0.198681354781265,0.240390899039938,0.295379054349154,0,0.15241361331,0.100826185136841,0,0.0962118416403295,0,2.72076460338254,0.221985953374065,0.0897138566094757,0,14.4892195524143,1.12609485270709,0.73260649706906,7.07415650960917,21.5676004735206,0,0,0,0,0,0,0,0,0,0,1.764384908931,1.59609949360412,1.19513524027894,1.45864030240976,1.67690530102386,2.75765262675021,0.888986911206461,3.09052585858341,0.962757628775446,2.02157769411038,3.29523089857312,2.26351609663291,2.06011316433741,2.11283002936069,2.12511235135769,3.33405583898152,1.73826488917283,1.54327376370964,2.47251540481984,2.50238164228475,2.05721551431249,2.48466128623072,0.953744759789284,2.0348498328526,1.31753132581463,2.11536519729191,2.0122077016005,1.05227884575137,3.25929873230068,1.12228454331548,3.32178050747688,3.25064791839359,2.04615521584845,1.70430525304563,1.92906610981141,2.24829520144151,2.10538447600868,1.50409737833809,4.59091996965224,2.20591419119516,1.39120701372253 | |||
|short_description=p4@Tbx2 | |||
}} |
Revision as of 05:52, 4 August 2015
Short description: | p4@Tbx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tbx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1092 |
Association with transcript: | 310bp_to_NM_009324, uc007ksb.1_5end |
EntrezGene: | 21385 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 7.83e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelial fold | 1.36e-11 | 20 |
lung | 1.87e-11 | 14 |
respiratory tube | 1.87e-11 | 14 |
respiration organ | 1.87e-11 | 14 |
pair of lungs | 1.87e-11 | 14 |
lung primordium | 1.87e-11 | 14 |
lung bud | 1.87e-11 | 14 |
renal system | 7.82e-11 | 19 |
urinary system structure | 3.60e-10 | 18 |
kidney | 5.14e-10 | 14 |
kidney mesenchyme | 5.14e-10 | 14 |
upper urinary tract | 5.14e-10 | 14 |
kidney rudiment | 5.14e-10 | 14 |
kidney field | 5.14e-10 | 14 |
epithelial bud | 2.33e-09 | 17 |
thoracic cavity element | 4.68e-09 | 17 |
thoracic segment organ | 4.68e-09 | 17 |
thoracic cavity | 4.68e-09 | 17 |
thoracic segment of trunk | 4.68e-09 | 17 |
respiratory primordium | 4.68e-09 | 17 |
endoderm of foregut | 4.68e-09 | 17 |
intermediate mesoderm | 4.88e-09 | 14 |
peripheral nervous system | 1.53e-08 | 11 |
trunk region element | 1.86e-08 | 79 |
subdivision of trunk | 4.45e-08 | 66 |
autonomic nervous system | 7.83e-08 | 9 |
trunk | 3.09e-07 | 90 |