FFCP PHASE1:Mm9::chr10:8482067..8482081,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=107|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:8482067..8482081,-|id=chr10:8482067..8482081,-|ontology_enrichment_celltype=CL:0000393!2.07e-10!39;CL:0000211!2.07e-10!39;CL:0000540!3.00e-10!33;CL:0000047!3.00e-10!33;CL:0000031!3.00e-10!33;CL:0000404!3.00e-10!33;CL:0000107!1.90e-09!9;CL:0000221!1.34e-07!44;CL:0000133!1.34e-07!44;CL:0000055!4.06e-07!50;CL:0002319!4.77e-07!43|ontology_enrichment_celltype_v019_2=CL:0000107,2.57e-45,9;CL:0000540,4.57e-24,33;CL:0000047,4.57e-24,33;CL:0000031,4.57e-24,33;CL:0000404,4.57e-24,33;CL:0000221,1.97e-20,44;CL:0000133,1.97e-20,44;CL:0000393,4.47e-20,39;CL:0000211,4.47e-20,39;CL:0002319,4.94e-18,43;CL:0002321,4.48e-12,70;CL:0000723,1.81e-07,91;CL:0000048,1.81e-07,91;CL:0002612,2.58e-07,3;CL:0000034,7.06e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!1.90e-09!9;UBERON:0000010!1.11e-08!11;UBERON:0004121!1.81e-08!102;UBERON:0000924!1.81e-08!102;UBERON:0006601!1.81e-08!102|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.57e-45,9;UBERON:0000010,6.87e-37,11;UBERON:0000011,1.62e-16,3;UBERON:0000013,3.26e-16,3;UBERON:0010313,1.03e-15,3;UBERON:0002342,1.03e-15,3;UBERON:0002005,1.03e-15,3;UBERON:0005428,1.03e-15,3;UBERON:0005062,1.03e-15,3;UBERON:0001017,1.68e-11,73;UBERON:0001016,3.88e-11,75;UBERON:0004121,1.01e-09,95;UBERON:0000924,1.01e-09,95;UBERON:0006601,1.01e-09,95;UBERON:0001948,2.53e-09,5;UBERON:0002315,2.53e-09,5;UBERON:0002240,7.50e-08,6;UBERON:0005174,7.50e-08,6;UBERON:0001137,7.50e-08,6;UBERON:0002257,2.58e-07,3|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0,0,0,2.57085885963423,0.883474163806454,0,0,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0.182975287204819,0,0.837548997004143,0.56276261003168,0.15279824777681,1.17851434189467,1.28134512719193,0.186399445825301,0,0.453429360640713,0,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,1.12674735821344,0,0,0,0,0,0,0,0,0,0,1.52232739156071,0.230615497256059,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0.969750506270444,0,1.17112318804619,0,0,0,0,0,0.299581278809645,0,0,0,0.255715457330331,0,0.486723789203273,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0,0.720248519221397,0,0.204109497453984,0.512454881139399,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,1.11218899690239,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0.292399974850665,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0,0,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0.339490171550376,0,0,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0.252470927204373,4.73262329124385,2.73307121007647,2.36965737506079,4.77937595905104,5.79276552614225,6.22768367735431,5.26253912177363,4.67609372658099,5.53402889125133,0,0,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0.565815239267694,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.32977250588296,0.968786560175433,0.422190474497091,0.716234064018819,0.164140899745061,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0,0,0.655087691238533,0.404593039154462,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0,0,0.68741272937475,0.685082519770642,0,0,0,0.453142408984205,0,0.31136204275253,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0.50695859978048,0,0.37456602987953,0.320125762024346,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0,0.238436189947321,0,0.376437521661322,0.507687647350059,0.365855945745545,0.263069711437843,0.271608227691724,1.12228454331548,0.118635018124174,0.29551344712669,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0.429742108096597,0.765153328275374,0.441182838239031,0|short_description=p@chr10:8482067..8482081,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:8482067..8482081,- | |||
|description=CAGE_peak_at_chr10:8482067..8482081,- | |||
|id=chr10:8482067..8482081,- | |||
|ontology_enrichment_celltype=CL:0000393!2.07e-10!39;CL:0000211!2.07e-10!39;CL:0000540!3.00e-10!33;CL:0000047!3.00e-10!33;CL:0000031!3.00e-10!33;CL:0000404!3.00e-10!33;CL:0000107!1.90e-09!9;CL:0000221!1.34e-07!44;CL:0000133!1.34e-07!44;CL:0000055!4.06e-07!50;CL:0002319!4.77e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.57e-45,9;CL:0000540,4.57e-24,33;CL:0000047,4.57e-24,33;CL:0000031,4.57e-24,33;CL:0000404,4.57e-24,33;CL:0000221,1.97e-20,44;CL:0000133,1.97e-20,44;CL:0000393,4.47e-20,39;CL:0000211,4.47e-20,39;CL:0002319,4.94e-18,43;CL:0002321,4.48e-12,70;CL:0000723,1.81e-07,91;CL:0000048,1.81e-07,91;CL:0002612,2.58e-07,3;CL:0000034,7.06e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!1.90e-09!9;UBERON:0000010!1.11e-08!11;UBERON:0004121!1.81e-08!102;UBERON:0000924!1.81e-08!102;UBERON:0006601!1.81e-08!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.57e-45,9;UBERON:0000010,6.87e-37,11;UBERON:0000011,1.62e-16,3;UBERON:0000013,3.26e-16,3;UBERON:0010313,1.03e-15,3;UBERON:0002342,1.03e-15,3;UBERON:0002005,1.03e-15,3;UBERON:0005428,1.03e-15,3;UBERON:0005062,1.03e-15,3;UBERON:0001017,1.68e-11,73;UBERON:0001016,3.88e-11,75;UBERON:0004121,1.01e-09,95;UBERON:0000924,1.01e-09,95;UBERON:0006601,1.01e-09,95;UBERON:0001948,2.53e-09,5;UBERON:0002315,2.53e-09,5;UBERON:0002240,7.50e-08,6;UBERON:0005174,7.50e-08,6;UBERON:0001137,7.50e-08,6;UBERON:0002257,2.58e-07,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0,0,0,0.139986421625363,0,0,0,0,0,0.286533439938757,0,0.404632921719196,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0,0,0,2.57085885963423,0.883474163806454,0,0,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0.182975287204819,0,0.837548997004143,0.56276261003168,0.15279824777681,1.17851434189467,1.28134512719193,0.186399445825301,0,0.453429360640713,0,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,1.12674735821344,0,0,0,0,0,0,0,0,0,0,1.52232739156071,0.230615497256059,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0.969750506270444,0,1.17112318804619,0,0,0,0,0,0.299581278809645,0,0,0,0.255715457330331,0,0.486723789203273,0.203678727700633,0.124406970610093,0,0,0.130120442962704,0,0.720248519221397,0,0.204109497453984,0.512454881139399,0.187403449119458,0.258703370739016,0,0,0,0.219195732427575,1.11218899690239,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0.292399974850665,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0,0,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0.339490171550376,0,0,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0.252470927204373,4.73262329124385,2.73307121007647,2.36965737506079,4.77937595905104,5.79276552614225,6.22768367735431,5.26253912177363,4.67609372658099,5.53402889125133,0,0,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0.565815239267694,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.32977250588296,0.968786560175433,0.422190474497091,0.716234064018819,0.164140899745061,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0,0,0.655087691238533,0.404593039154462,0.165306911450672,0.26175594198403,0,0,0,0,0,0,0,0.337912250981556,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0,0,0.68741272937475,0.685082519770642,0,0,0,0.453142408984205,0,0.31136204275253,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0.50695859978048,0,0.37456602987953,0.320125762024346,0.229741875822453,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,0.342869252385415,0,0.238436189947321,0,0.376437521661322,0.507687647350059,0.365855945745545,0.263069711437843,0.271608227691724,1.12228454331548,0.118635018124174,0.29551344712669,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0.429742108096597,0.765153328275374,0.441182838239031,0 | |||
|short_description=p@chr10:8482067..8482081,- | |||
}} |
Latest revision as of 22:47, 4 August 2015
Short description: | p@chr10:8482067..8482081, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:8482067..8482081, - |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.57e-45 | 9 |
neuron | 4.57e-24 | 33 |
neuronal stem cell | 4.57e-24 | 33 |
neuroblast | 4.57e-24 | 33 |
electrically signaling cell | 4.57e-24 | 33 |
ectodermal cell | 1.97e-20 | 44 |
neurectodermal cell | 1.97e-20 | 44 |
electrically responsive cell | 4.47e-20 | 39 |
electrically active cell | 4.47e-20 | 39 |
neural cell | 4.94e-18 | 43 |
embryonic cell | 4.48e-12 | 70 |
somatic stem cell | 1.81e-07 | 91 |
multi fate stem cell | 1.81e-07 | 91 |
neuron of the ventral spinal cord | 2.58e-07 | 3 |
stem cell | 7.06e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.57e-45 | 9 |
peripheral nervous system | 6.87e-37 | 11 |
parasympathetic nervous system | 1.62e-16 | 3 |
sympathetic nervous system | 3.26e-16 | 3 |
neural crest-derived structure | 1.03e-15 | 3 |
neural crest | 1.03e-15 | 3 |
enteric nervous system | 1.03e-15 | 3 |
vagal neural crest | 1.03e-15 | 3 |
neural fold | 1.03e-15 | 3 |
central nervous system | 1.68e-11 | 73 |
nervous system | 3.88e-11 | 75 |
ectoderm-derived structure | 1.01e-09 | 95 |
ectoderm | 1.01e-09 | 95 |
presumptive ectoderm | 1.01e-09 | 95 |
regional part of spinal cord | 2.53e-09 | 5 |
gray matter of spinal cord | 2.53e-09 | 5 |
spinal cord | 7.50e-08 | 6 |
dorsal region element | 7.50e-08 | 6 |
dorsum | 7.50e-08 | 6 |
ventral horn of spinal cord | 2.58e-07 | 3 |