FFCP PHASE1:Mm9::chr2:35137841..35137849,+: Difference between revisions
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{{FFCP|EntrezGene=227753|HGNC=|UniProt=P13020,A2AL35|association_with_transcript=-50bp_to_ENSMUST00000028239,NM_146120_5end|description=CAGE_peak_5_at_Gsn_5end|id=chr2:35137841..35137849,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000128,1.31e-07,6;CL:0000126,1.31e-07,6;CL:0000127,1.31e-07,6;CL:0000192,3.23e-07,3;CL:0000359,3.23e-07,3;CL:0002539,3.23e-07,3;CL:0000514,3.23e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.69e-11,14;UBERON:0000117,3.69e-11,14;UBERON:0000171,3.69e-11,14;UBERON:0000170,3.69e-11,14;UBERON:0005597,3.69e-11,14;UBERON:0000118,3.69e-11,14;UBERON:0005153,4.18e-09,17;UBERON:0005178,4.18e-09,17;UBERON:0005181,4.18e-09,17;UBERON:0002224,4.18e-09,17;UBERON:0000915,4.18e-09,17;UBERON:0008947,4.18e-09,17;UBERON:0003258,4.18e-09,17;UBERON:0005157,1.15e-07,20;UBERON:0001135,3.23e-07,3;UBERON:0004237,3.23e-07,3;UBERON:0004695,3.23e-07,3;UBERON:0002111,3.23e-07,3;UBERON:0004178,3.23e-07,3|phase1_expression=0,1.04692622291808,0.454999239389536,0.60492842261366,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.319984845586813,0.68822784320151,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0.756090389279792,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,2.02753862439029,0,4.69434806608824,0,0.439372365468944,1.36100929351998,2.51975558925653,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0.889294796111139,0,0,0,0.599200221036809,0,0,0,0,0,0.441737081903227,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,1.33597925158342,0.173485326766136,0,0.230615497256059,0,0.117588707135705,1.38233250462643,1.48316980640624,0.289198713839823,0.884610551949874,0.161766849947409,1.10420759230197,0.484875253135222,0,0.292780797011547,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,1.01839363850316,0.746441823660558,0.505445516867349,0.420883711772948,0,0,0,0.452114453507145,0.136072998302656,0,0,0,0,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.329119699826961,0,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,0.420579897128254,0,0,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0.502670417600539,0.198956472041151,0,0,0.864552199498777,0.597423819763102,0,0.114248512609729,0,0,0,0.350679099451593,0.316182685621286,0.147610147979602,0.156998727841375,0.246794327843601,0.296452627087149,0.333690211432188,0,0.224862112384854,0.405720242777006,0.72353147925725,0.763877555344259,0,0,0.274561413188081,0,0.744281895337007,0,0,0,0,1.66277871149944,0,0.162964976442026,0,0,0,0.238043640886014,3.31727201358258,0.472905432318573,0.221464689648775,1.2756381492599,1.14704320301017,1.20879487306127,2.16973587872267,0,0,0,0.275936746304732,0.321101179975584,0.937693492737625,0,0.504941854408746,0,0,0,0,0,0,0.404810701674894,0,0,0,0.567760340833074,0.712262414669021,0.488660878060728,1.31976098378028,0,0,0.302323556964751,0.188605079755898,0,0,0,0.727067458955011,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0.42366414172764,0.441056796109924,2.14352128823924,0.645857706783622,0.72375509913787,0.119372344003136,0.656563598980245,0,0.18542530201051,0,0.619160603889667,0,0,0.136694227721025,0.457556346413045,0,0,0.138199973804424,0,0,0,0.756037385752609,0.627264888043406,0.436725127492355,0.809186078308924,0.661227645802687,0.785267825952089,0.388844919875379,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0.965947970160952,0.93841237725591,0.915758121336325,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0.44449345560323,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,0,0.441182838239031,0.231867835620421|short_description=p5@Gsn}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:227753 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P13020,uniprot:A2AL35 | |||
|association_with_transcript=-50bp_to_ENSMUST00000028239,NM_146120_5end | |||
|cluster_id=chr2:35137841..35137849,+ | |||
|description=CAGE_peak_5_at_Gsn_5end | |||
|id=chr2:35137841..35137849,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.31e-07,6;CL:0000126,1.31e-07,6;CL:0000127,1.31e-07,6;CL:0000192,3.23e-07,3;CL:0000359,3.23e-07,3;CL:0002539,3.23e-07,3;CL:0000514,3.23e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,3.69e-11,14;UBERON:0000117,3.69e-11,14;UBERON:0000171,3.69e-11,14;UBERON:0000170,3.69e-11,14;UBERON:0005597,3.69e-11,14;UBERON:0000118,3.69e-11,14;UBERON:0005153,4.18e-09,17;UBERON:0005178,4.18e-09,17;UBERON:0005181,4.18e-09,17;UBERON:0002224,4.18e-09,17;UBERON:0000915,4.18e-09,17;UBERON:0008947,4.18e-09,17;UBERON:0003258,4.18e-09,17;UBERON:0005157,1.15e-07,20;UBERON:0001135,3.23e-07,3;UBERON:0004237,3.23e-07,3;UBERON:0004695,3.23e-07,3;UBERON:0002111,3.23e-07,3;UBERON:0004178,3.23e-07,3 | |||
|phase1_expression=0,1.04692622291808,0.454999239389536,0.60492842261366,0.500895729946347,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0.319984845586813,0.68822784320151,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0.756090389279792,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,2.02753862439029,0,4.69434806608824,0,0.439372365468944,1.36100929351998,2.51975558925653,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0.889294796111139,0,0,0,0.599200221036809,0,0,0,0,0,0.441737081903227,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,1.33597925158342,0.173485326766136,0,0.230615497256059,0,0.117588707135705,1.38233250462643,1.48316980640624,0.289198713839823,0.884610551949874,0.161766849947409,1.10420759230197,0.484875253135222,0,0.292780797011547,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,1.01839363850316,0.746441823660558,0.505445516867349,0.420883711772948,0,0,0,0.452114453507145,0.136072998302656,0,0,0,0,0,0,0,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0.329119699826961,0,0.243206428637567,0.292399974850665,0.219550115291051,0.268412837520744,0.420579897128254,0,0,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0.502670417600539,0.198956472041151,0,0,0.864552199498777,0.597423819763102,0,0.114248512609729,0,0,0,0.350679099451593,0.316182685621286,0.147610147979602,0.156998727841375,0.246794327843601,0.296452627087149,0.333690211432188,0,0.224862112384854,0.405720242777006,0.72353147925725,0.763877555344259,0,0,0.274561413188081,0,0.744281895337007,0,0,0,0,1.66277871149944,0,0.162964976442026,0,0,0,0.238043640886014,3.31727201358258,0.472905432318573,0.221464689648775,1.2756381492599,1.14704320301017,1.20879487306127,2.16973587872267,0,0,0,0.275936746304732,0.321101179975584,0.937693492737625,0,0.504941854408746,0,0,0,0,0,0,0.404810701674894,0,0,0,0.567760340833074,0.712262414669021,0.488660878060728,1.31976098378028,0,0,0.302323556964751,0.188605079755898,0,0,0,0.727067458955011,0.712994756769443,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0.42366414172764,0.441056796109924,2.14352128823924,0.645857706783622,0.72375509913787,0.119372344003136,0.656563598980245,0,0.18542530201051,0,0.619160603889667,0,0,0.136694227721025,0.457556346413045,0,0,0.138199973804424,0,0,0,0.756037385752609,0.627264888043406,0.436725127492355,0.809186078308924,0.661227645802687,0.785267825952089,0.388844919875379,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0.104859344425711,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,1.13365191807606,0,0,0,0.965947970160952,0.93841237725591,0.915758121336325,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0,0,0.44449345560323,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0.192075457214608,0.229741875822453,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0,0.249810577937946,0,0.429742108096597,0,0.441182838239031,0.231867835620421 | |||
|short_description=p5@Gsn | |||
}} |
Revision as of 02:59, 5 August 2015
Short description: | p5@Gsn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Gsn_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_ENSMUST00000028239, NM_146120_5end |
EntrezGene: | 227753 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.31e-07 | 6 |
macroglial cell | 1.31e-07 | 6 |
astrocyte | 1.31e-07 | 6 |
smooth muscle cell | 3.23e-07 | 3 |
vascular associated smooth muscle cell | 3.23e-07 | 3 |
aortic smooth muscle cell | 3.23e-07 | 3 |
smooth muscle myoblast | 3.23e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung | 3.69e-11 | 14 |
respiratory tube | 3.69e-11 | 14 |
respiration organ | 3.69e-11 | 14 |
pair of lungs | 3.69e-11 | 14 |
lung primordium | 3.69e-11 | 14 |
lung bud | 3.69e-11 | 14 |
epithelial bud | 4.18e-09 | 17 |
thoracic cavity element | 4.18e-09 | 17 |
thoracic segment organ | 4.18e-09 | 17 |
thoracic cavity | 4.18e-09 | 17 |
thoracic segment of trunk | 4.18e-09 | 17 |
respiratory primordium | 4.18e-09 | 17 |
endoderm of foregut | 4.18e-09 | 17 |
epithelial fold | 1.15e-07 | 20 |
smooth muscle tissue | 3.23e-07 | 3 |
blood vessel smooth muscle | 3.23e-07 | 3 |
arterial system smooth muscle | 3.23e-07 | 3 |
artery smooth muscle tissue | 3.23e-07 | 3 |
aorta smooth muscle tissue | 3.23e-07 | 3 |