FFCP PHASE1:Mm9::chr1:166368007..166368035,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3243|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:166368007..166368035,-|id=chr1:166368007..166368035,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,1.24e-07,3;CL:0002614,8.16e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.28e-09!15;UBERON:0001242!1.29e-08!13;UBERON:0000060!1.29e-08!13;UBERON:0001262!1.29e-08!13;UBERON:0004786!1.29e-08!13;UBERON:0000160!7.71e-08!43;UBERON:0002021!9.84e-08!10;UBERON:0000411!9.84e-08!10;UBERON:0001950!9.84e-08!10;UBERON:0000485!9.82e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.31e-12,10;UBERON:0000411,4.31e-12,10;UBERON:0001950,4.31e-12,10;UBERON:0000160,7.96e-11,31;UBERON:0000073,4.34e-10,54;UBERON:0002020,9.74e-10,34;UBERON:0001242,4.50e-09,13;UBERON:0001262,4.50e-09,13;UBERON:0004786,4.50e-09,13;UBERON:0002108,3.10e-08,4;UBERON:0000344,1.16e-07,15;UBERON:0004684,1.24e-07,3;UBERON:0002275,1.24e-07,3;UBERON:0003528,1.74e-07,29;UBERON:0002791,1.74e-07,29;UBERON:0001893,1.74e-07,29;UBERON:0005409,4.22e-07,47;UBERON:0001049,6.24e-07,52;UBERON:0005068,6.24e-07,52;UBERON:0006241,6.24e-07,52;UBERON:0007135,6.24e-07,52;UBERON:0000331,6.50e-07,3;UBERON:0002116,6.50e-07,3;UBERON:0001204,6.50e-07,3;UBERON:0001168,6.50e-07,3;UBERON:0002038,8.16e-07,3;UBERON:0009663,8.16e-07,3;UBERON:0009661,8.16e-07,3;UBERON:0000125,8.16e-07,3;UBERON:0002308,8.16e-07,3|phase1_expression=0.640595388419176,0.697950815278722,1.36499771816861,3.93203474698879,5.50985302940982,0.33575854382378,0.700837921786577,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.425216450755349,0,0,0.47997726838022,0.45881856213434,1.72269589234506,1.7230479846363,1.07735616342945,3.42042155021473,2.01624103807945,1.99557459589774,0,0,0,1.44425809875637,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0,0,0.210324961351382,1.99955689082663,0.883474163806454,0,0.0958454710182364,0,8.8092704799511,5.10749352340751,3.22573719838111,0,0,0,1.67509799400829,3.37657566019008,2.29197371665215,1.47314292736834,1.42371680799103,0.186399445825301,0,0,0.579728977403356,1.72084775396277,0.679971333707751,0.539703191637817,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0,0,5.93756174539112,0,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0,0.494389935468748,0,0,0,0,0.484875253135222,0,0.585561594023094,0.41889341362691,1.53274233125155,0,0,0,0.599162557619291,0.457500602818626,0,1.04294592115366,1.53429274398198,1.0389402227978,0.648965052271031,0,0,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.462801338662135,0.232533944750408,0.268273401399619,0,0.329119699826961,0.32833492815819,0.405344047729279,0.146199987425332,0.439100230582101,0.134206418760372,0.841159794256509,0.205809224758569,4.29544417878937,2.90895623329899,0,0,0.128867461322093,0,0,1.14135375667535,1.42358718463353,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,0,1.72910439899755,1.39398891278057,0.379335801906163,0.114248512609729,1.1270773567308,0.407302655690628,0,0.49095073923223,0.822074982615345,2.80459281161244,2.511979645462,1.23397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0.327726629431476,0,0.723245292907558,0,0,0,0,1.76605648986571,0.937693492737625,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0.21183207086382,0.661585194164886,0.16488625294148,0,0.0603129249281559,0,0,1.1659233465194,0.927126510052548,0,0,0,0,0.136694227721025,0,0,0,0,7.63736494412091,0,0,0,0,0.218362563746178,0.269728692769641,0.247960367176008,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.179427713218951,0,0,0,0,0,0,1.6942555278512,2.76195141904306,1.14579102687879,2.92150409984269,0.685082519770642,5.2877572817279,2.02506750069542,2.2516060161211,0.906284817968409,3.10656187051092,0,0,0,0,0.209613162627982,0.551530525350042,0.666740183404846,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.561849044819294,0.128050304809739,0.17230640686684,0,0.347652977834566,0,0,0,0,0.177475806159338,0.953744759789284,0.290692833264657,0.282328141245992,0.338458431566706,0.365855945745545,0.263069711437843,0.407412341537585,0,0.118635018124174,0.29551344712669,0.818462086339379,0,0.192906610981141,0,0,0.429742108096597,0,0,0|short_description=p@chr1:166368007..166368035,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3243 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:166368007..166368035,- | |||
|description=CAGE_peak_at_chr1:166368007..166368035,- | |||
|id=chr1:166368007..166368035,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.24e-07,3;CL:0002614,8.16e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.28e-09!15;UBERON:0001242!1.29e-08!13;UBERON:0000060!1.29e-08!13;UBERON:0001262!1.29e-08!13;UBERON:0004786!1.29e-08!13;UBERON:0000160!7.71e-08!43;UBERON:0002021!9.84e-08!10;UBERON:0000411!9.84e-08!10;UBERON:0001950!9.84e-08!10;UBERON:0000485!9.82e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.31e-12,10;UBERON:0000411,4.31e-12,10;UBERON:0001950,4.31e-12,10;UBERON:0000160,7.96e-11,31;UBERON:0000073,4.34e-10,54;UBERON:0002020,9.74e-10,34;UBERON:0001242,4.50e-09,13;UBERON:0001262,4.50e-09,13;UBERON:0004786,4.50e-09,13;UBERON:0002108,3.10e-08,4;UBERON:0000344,1.16e-07,15;UBERON:0004684,1.24e-07,3;UBERON:0002275,1.24e-07,3;UBERON:0003528,1.74e-07,29;UBERON:0002791,1.74e-07,29;UBERON:0001893,1.74e-07,29;UBERON:0005409,4.22e-07,47;UBERON:0001049,6.24e-07,52;UBERON:0005068,6.24e-07,52;UBERON:0006241,6.24e-07,52;UBERON:0007135,6.24e-07,52;UBERON:0000331,6.50e-07,3;UBERON:0002116,6.50e-07,3;UBERON:0001204,6.50e-07,3;UBERON:0001168,6.50e-07,3;UBERON:0002038,8.16e-07,3;UBERON:0009663,8.16e-07,3;UBERON:0009661,8.16e-07,3;UBERON:0000125,8.16e-07,3;UBERON:0002308,8.16e-07,3 | |||
|phase1_expression=0.640595388419176,0.697950815278722,1.36499771816861,3.93203474698879,5.50985302940982,0.33575854382378,0.700837921786577,0.129123323441576,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.425216450755349,0,0,0.47997726838022,0.45881856213434,1.72269589234506,1.7230479846363,1.07735616342945,3.42042155021473,2.01624103807945,1.99557459589774,0,0,0,1.44425809875637,0.831173226792462,0.612508068787107,0,0,0,0,0,0,0.377690453926732,0.506884656097573,0,0,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0,0,0.210324961351382,1.99955689082663,0.883474163806454,0,0.0958454710182364,0,8.8092704799511,5.10749352340751,3.22573719838111,0,0,0,1.67509799400829,3.37657566019008,2.29197371665215,1.47314292736834,1.42371680799103,0.186399445825301,0,0,0.579728977403356,1.72084775396277,0.679971333707751,0.539703191637817,0,0,0.140444420131752,0,0,0,1.40843419776681,0,0,0,0.216491041011214,0,0,5.93756174539112,0,0,0,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0,0.494389935468748,0,0,0,0,0.484875253135222,0,0.585561594023094,0.41889341362691,1.53274233125155,0,0,0,0.599162557619291,0.457500602818626,0,1.04294592115366,1.53429274398198,1.0389402227978,0.648965052271031,0,0,0.252722758433675,0.210441855886474,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0,0.462801338662135,0.232533944750408,0.268273401399619,0,0.329119699826961,0.32833492815819,0.405344047729279,0.146199987425332,0.439100230582101,0.134206418760372,0.841159794256509,0.205809224758569,4.29544417878937,2.90895623329899,0,0,0.128867461322093,0,0,1.14135375667535,1.42358718463353,0.494096864172033,0.251335208800269,0.397912944082302,0.19496408711912,0,1.72910439899755,1.39398891278057,0.379335801906163,0.114248512609729,1.1270773567308,0.407302655690628,0,0.49095073923223,0.822074982615345,2.80459281161244,2.511979645462,1.23397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0.221464689648775,0,0.327726629431476,0,0.723245292907558,0,0,0,0,1.76605648986571,0.937693492737625,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0.21183207086382,0.661585194164886,0.16488625294148,0,0.0603129249281559,0,0,1.1659233465194,0.927126510052548,0,0,0,0,0.136694227721025,0,0,0,0,7.63736494412091,0,0,0,0,0.218362563746178,0.269728692769641,0.247960367176008,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0.241584120826006,0,0,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0.179427713218951,0,0,0,0,0,0,1.6942555278512,2.76195141904306,1.14579102687879,2.92150409984269,0.685082519770642,5.2877572817279,2.02506750069542,2.2516060161211,0.906284817968409,3.10656187051092,0,0,0,0,0.209613162627982,0.551530525350042,0.666740183404846,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.561849044819294,0.128050304809739,0.17230640686684,0,0.347652977834566,0,0,0,0,0.177475806159338,0.953744759789284,0.290692833264657,0.282328141245992,0.338458431566706,0.365855945745545,0.263069711437843,0.407412341537585,0,0.118635018124174,0.29551344712669,0.818462086339379,0,0.192906610981141,0,0,0.429742108096597,0,0,0 | |||
|short_description=p@chr1:166368007..166368035,- | |||
}} |
Latest revision as of 03:55, 5 August 2015
Short description: | p@chr1:166368007..166368035, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:166368007..166368035, - |
Coexpression cluster: | MCL_coexpression_mm9:3243 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.24e-07 | 3 |
neuron of the substantia nigra | 8.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.31e-12 | 10 |
visual cortex | 4.31e-12 | 10 |
neocortex | 4.31e-12 | 10 |
intestine | 7.96e-11 | 31 |
regional part of nervous system | 4.34e-10 | 54 |
gray matter | 9.74e-10 | 34 |
intestinal mucosa | 4.50e-09 | 13 |
wall of intestine | 4.50e-09 | 13 |
gastrointestinal system mucosa | 4.50e-09 | 13 |
small intestine | 3.10e-08 | 4 |
mucosa | 1.16e-07 | 15 |
raphe nuclei | 1.24e-07 | 3 |
reticular formation | 1.24e-07 | 3 |
brain grey matter | 1.74e-07 | 29 |
regional part of telencephalon | 1.74e-07 | 29 |
telencephalon | 1.74e-07 | 29 |
gastrointestinal system | 4.22e-07 | 47 |
neural tube | 6.24e-07 | 52 |
neural rod | 6.24e-07 | 52 |
future spinal cord | 6.24e-07 | 52 |
neural keel | 6.24e-07 | 52 |
ileal mucosa | 6.50e-07 | 3 |
ileum | 6.50e-07 | 3 |
mucosa of small intestine | 6.50e-07 | 3 |
wall of small intestine | 6.50e-07 | 3 |
substantia nigra | 8.16e-07 | 3 |
telencephalic nucleus | 8.16e-07 | 3 |
midbrain nucleus | 8.16e-07 | 3 |
neural nucleus | 8.16e-07 | 3 |
nucleus of brain | 8.16e-07 | 3 |