FFCP PHASE1:Mm9::chr6:128924916..128924937,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=100504591|HGNC=|UniProt=|association_with_transcript=109bp_to_ENSMUST00000141700,NR_045009,uc009eex.1_5end|description=CAGE_peak_1_at_Gm15987_5end|id=chr6:128924916..128924937,-|ontology_enrichment_celltype=CL:0000049!2.56e-07!19|ontology_enrichment_celltype_v019_2=CL:0000049,5.74e-11,19;CL:0000988,1.32e-08,32;CL:0002032,1.32e-08,32;CL:0000037,1.32e-08,32;CL:0000837,1.32e-08,32;CL:0000763,1.95e-08,16;CL:0000553,3.05e-07,6;CL:0000556,3.05e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.36e-12!48;UBERON:0002204!8.43e-12!32;UBERON:0002390!4.80e-11!45;UBERON:0003061!4.80e-11!45;UBERON:0002405!5.51e-10!70;UBERON:0002371!2.84e-09!16;UBERON:0001474!5.12e-09!22;UBERON:0004765!5.12e-09!22;UBERON:0001434!5.12e-09!22;UBERON:0003081!8.14e-09!88;UBERON:0000926!6.07e-07!193;UBERON:0004120!6.07e-07!193;UBERON:0006603!6.07e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.80e-16,32;UBERON:0002193,8.91e-15,48;UBERON:0002405,8.91e-15,48;UBERON:0002390,1.47e-12,45;UBERON:0003061,1.47e-12,45;UBERON:0002371,2.81e-11,16;UBERON:0001474,3.77e-11,22;UBERON:0004765,3.77e-11,22;UBERON:0001434,3.77e-11,22;UBERON:0003081,1.66e-09,87;UBERON:0000926,4.92e-07,120;UBERON:0004120,4.92e-07,120;UBERON:0006603,4.92e-07,120;UBERON:0002106,5.38e-07,6;UBERON:0004457,5.38e-07,6;UBERON:0000042,5.38e-07,6;UBERON:0004854,5.38e-07,6;UBERON:0009034,5.38e-07,6;UBERON:0002095,5.38e-07,6;UBERON:0004782,5.38e-07,6;UBERON:0003281,5.38e-07,6;UBERON:0009664,5.38e-07,6;UBERON:0002296,5.38e-07,6;UBERON:0005602,5.38e-07,6;UBERON:0001179,5.38e-07,6;UBERON:0006293,5.38e-07,6|phase1_expression=0,0.697950815278722,0.909998478779072,0,0,1.84667199103079,2.33612640595526,3.61545305636414,0,0,0,0.319088635981346,0,0.0874204024189974,7.99463428357591,12.5534665781692,2.09868563438444,53.9440302762586,61.0159229545538,36.9218997064286,0.850432901510698,5.36171136484781,19.0675846071423,2.3998863419011,4.81759490241057,1.14846392823004,1.29228598847722,3.01659725760245,0.190023419456374,0,4.43461021310609,0,0,0,0,0,0,19.2524550138978,39.06676722619,32.4584721263755,0,2.04913645487534,3.88408282424923,98.1995180209503,89.0089456107338,36.1587101758513,0,0,0,0.194429899074283,0,0,24.6640430904872,0.725362142011344,0.336093799142464,0,0,1.03134418455488,0,0,0,0,0,2.2497492932035,1.97773272513395,0.7104801149461,0.898800331555214,1.53687322128622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,2.10666630197628,0,0,0,0,1.28326477414318,0,0,0,0,0,1.48439043634778,80.0118060469761,0.890652834388949,0,0,0,0,0.587943535678524,0,0,7.51916655983541,8.84610551949874,0.808834249737046,4.85851340612866,5.81850303762267,0,0.292780797011547,0,0.255457055208591,8.98613433794402,6.59893004092748,11.3092502095028,0,0,0,0,0,0,0,0,6.46916247172484,0.252722758433675,0.420883711772948,0,0.459804208866946,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0.556094498451196,0,1.23469281844766,0,18.9597560574573,11.8380037272769,13.0715209721973,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0.492502392237286,0.243206428637567,0,2.63460138349261,0.402619256281115,0,0.102904612379284,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.442830443938806,0.784993639206874,0.123397163921801,0.296452627087149,0,0,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,1.15078454980324,3.08056930872567,3.29473695825698,2.87536413054709,0.744281895337007,0.936113019343682,0.505157755894224,0.358794827043824,0,13.6717360723287,0,0,0,0,0,0,0.390267295715598,4.57141917907954,3.5434350343804,2.71073106717728,6.55453258862952,12.7786886580763,4.62876987460837,7.53956419696361,58.7418138524206,0.491764273019036,2.20749397043786,0,0.117211686592203,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0,2.14461159864296,0,0,0.302323556964751,0.188605079755898,0,0.614870295887855,0.258428293168221,0,0,1.8962205476149,1.05418608574999,1.03135543248187,0.340439605753788,0,0,0.214337035031592,0,0,0,0,0.704015124191131,0.21183207086382,0,19.4565778470946,2.26050197374268,1.86970067277283,2.38744688006273,3.93938159388147,1.1659233465194,0,23.9219233116994,3.50857675537478,4.44466865687308,12.0555812483002,13.2593400889394,19.4461447225544,0.339956859987711,0.69975726161829,0.276399947608848,0,0,1.21991680276109,0.756037385752609,1.04544148007234,0.436725127492355,0.404593039154462,0.909188012978695,1.04702376793612,0.259229946583586,3.72803587852155,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0.288030006257865,3.16011120628178,0.405450430580328,1.84879722896689,1.16928740680016,0.895133478337407,1.98681354781265,0.721172697119813,1.03382669022204,0.807731599585181,1.06689529317,0.907435666231565,2.0466154955348,2.02044867444692,1.28564592399726,2.72076460338254,0,0,0,1.54551675225752,0.93841237725591,0.73260649706906,7.5028932677673,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.44449345560323,0.824140228955577,0.64183841918363,1.01078884705519,0.50695859978048,0.188626341386076,0.280924522409647,0.640251524048693,0.229741875822453,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0.376437521661322,0.25384382367503,0,0,0.407412341537585,0.561142271657738,0,0.197008964751127,0.818462086339379,0.464810523557898,0.771626443924566,0.499621155875892,0.701794825336225,0.214871054048298,0.57386499620653,2.42650561031467,1.62307484934295|short_description=p1@Gm15987}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100504591 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=109bp_to_ENSMUST00000141700,NR_045009,uc009eex.1_5end | |||
|cluster_id=chr6:128924916..128924937,- | |||
|description=CAGE_peak_1_at_Gm15987_5end | |||
|id=chr6:128924916..128924937,- | |||
|ontology_enrichment_celltype=CL:0000049!2.56e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,5.74e-11,19;CL:0000988,1.32e-08,32;CL:0002032,1.32e-08,32;CL:0000037,1.32e-08,32;CL:0000837,1.32e-08,32;CL:0000763,1.95e-08,16;CL:0000553,3.05e-07,6;CL:0000556,3.05e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.36e-12!48;UBERON:0002204!8.43e-12!32;UBERON:0002390!4.80e-11!45;UBERON:0003061!4.80e-11!45;UBERON:0002405!5.51e-10!70;UBERON:0002371!2.84e-09!16;UBERON:0001474!5.12e-09!22;UBERON:0004765!5.12e-09!22;UBERON:0001434!5.12e-09!22;UBERON:0003081!8.14e-09!88;UBERON:0000926!6.07e-07!193;UBERON:0004120!6.07e-07!193;UBERON:0006603!6.07e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.80e-16,32;UBERON:0002193,8.91e-15,48;UBERON:0002405,8.91e-15,48;UBERON:0002390,1.47e-12,45;UBERON:0003061,1.47e-12,45;UBERON:0002371,2.81e-11,16;UBERON:0001474,3.77e-11,22;UBERON:0004765,3.77e-11,22;UBERON:0001434,3.77e-11,22;UBERON:0003081,1.66e-09,87;UBERON:0000926,4.92e-07,120;UBERON:0004120,4.92e-07,120;UBERON:0006603,4.92e-07,120;UBERON:0002106,5.38e-07,6;UBERON:0004457,5.38e-07,6;UBERON:0000042,5.38e-07,6;UBERON:0004854,5.38e-07,6;UBERON:0009034,5.38e-07,6;UBERON:0002095,5.38e-07,6;UBERON:0004782,5.38e-07,6;UBERON:0003281,5.38e-07,6;UBERON:0009664,5.38e-07,6;UBERON:0002296,5.38e-07,6;UBERON:0005602,5.38e-07,6;UBERON:0001179,5.38e-07,6;UBERON:0006293,5.38e-07,6 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,0,0,1.84667199103079,2.33612640595526,3.61545305636414,0,0,0,0.319088635981346,0,0.0874204024189974,7.99463428357591,12.5534665781692,2.09868563438444,53.9440302762586,61.0159229545538,36.9218997064286,0.850432901510698,5.36171136484781,19.0675846071423,2.3998863419011,4.81759490241057,1.14846392823004,1.29228598847722,3.01659725760245,0.190023419456374,0,4.43461021310609,0,0,0,0,0,0,19.2524550138978,39.06676722619,32.4584721263755,0,2.04913645487534,3.88408282424923,98.1995180209503,89.0089456107338,36.1587101758513,0,0,0,0.194429899074283,0,0,24.6640430904872,0.725362142011344,0.336093799142464,0,0,1.03134418455488,0,0,0,0,0,2.2497492932035,1.97773272513395,0.7104801149461,0.898800331555214,1.53687322128622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,2.10666630197628,0,0,0,0,1.28326477414318,0,0,0,0,0,1.48439043634778,80.0118060469761,0.890652834388949,0,0,0,0,0.587943535678524,0,0,7.51916655983541,8.84610551949874,0.808834249737046,4.85851340612866,5.81850303762267,0,0.292780797011547,0,0.255457055208591,8.98613433794402,6.59893004092748,11.3092502095028,0,0,0,0,0,0,0,0,6.46916247172484,0.252722758433675,0.420883711772948,0,0.459804208866946,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0.556094498451196,0,1.23469281844766,0,18.9597560574573,11.8380037272769,13.0715209721973,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0.492502392237286,0.243206428637567,0,2.63460138349261,0.402619256281115,0,0.102904612379284,0,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0,0,0.502670417600539,0.198956472041151,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0.193952487167626,0.0701358198903186,0.189709611372772,0.442830443938806,0.784993639206874,0.123397163921801,0.296452627087149,0,0,0.449724224769707,0.608580364165509,0.482354319504834,0.50925170356284,1.15078454980324,3.08056930872567,3.29473695825698,2.87536413054709,0.744281895337007,0.936113019343682,0.505157755894224,0.358794827043824,0,13.6717360723287,0,0,0,0,0,0,0.390267295715598,4.57141917907954,3.5434350343804,2.71073106717728,6.55453258862952,12.7786886580763,4.62876987460837,7.53956419696361,58.7418138524206,0.491764273019036,2.20749397043786,0,0.117211686592203,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.178065603667255,0,2.14461159864296,0,0,0.302323556964751,0.188605079755898,0,0.614870295887855,0.258428293168221,0,0,1.8962205476149,1.05418608574999,1.03135543248187,0.340439605753788,0,0,0.214337035031592,0,0,0,0,0.704015124191131,0.21183207086382,0,19.4565778470946,2.26050197374268,1.86970067277283,2.38744688006273,3.93938159388147,1.1659233465194,0,23.9219233116994,3.50857675537478,4.44466865687308,12.0555812483002,13.2593400889394,19.4461447225544,0.339956859987711,0.69975726161829,0.276399947608848,0,0,1.21991680276109,0.756037385752609,1.04544148007234,0.436725127492355,0.404593039154462,0.909188012978695,1.04702376793612,0.259229946583586,3.72803587852155,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0.288030006257865,3.16011120628178,0.405450430580328,1.84879722896689,1.16928740680016,0.895133478337407,1.98681354781265,0.721172697119813,1.03382669022204,0.807731599585181,1.06689529317,0.907435666231565,2.0466154955348,2.02044867444692,1.28564592399726,2.72076460338254,0,0,0,1.54551675225752,0.93841237725591,0.73260649706906,7.5028932677673,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0.735374033800057,0.44449345560323,0.824140228955577,0.64183841918363,1.01078884705519,0.50695859978048,0.188626341386076,0.280924522409647,0.640251524048693,0.229741875822453,0,0.115884325944855,0.578727661391115,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0.376437521661322,0.25384382367503,0,0,0.407412341537585,0.561142271657738,0,0.197008964751127,0.818462086339379,0.464810523557898,0.771626443924566,0.499621155875892,0.701794825336225,0.214871054048298,0.57386499620653,2.42650561031467,1.62307484934295 | |||
|short_description=p1@Gm15987 | |||
}} |
Revision as of 05:52, 5 August 2015
Short description: | p1@Gm15987 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm15987_5end |
Coexpression cluster: | NA |
Association with transcript: | 109bp_to_ENSMUST00000141700, NR_045009, uc009eex.1_5end |
EntrezGene: | 100504591 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 5.74e-11 | 19 |
hematopoietic cell | 1.32e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.32e-08 | 32 |
hematopoietic stem cell | 1.32e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.32e-08 | 32 |
myeloid cell | 1.95e-08 | 16 |
megakaryocyte progenitor cell | 3.05e-07 | 6 |
megakaryocyte | 3.05e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.80e-16 | 32 |
hemolymphoid system | 8.91e-15 | 48 |
immune system | 8.91e-15 | 48 |
hematopoietic system | 1.47e-12 | 45 |
blood island | 1.47e-12 | 45 |
bone marrow | 2.81e-11 | 16 |
bone element | 3.77e-11 | 22 |
skeletal element | 3.77e-11 | 22 |
skeletal system | 3.77e-11 | 22 |
lateral plate mesoderm | 1.66e-09 | 87 |
mesoderm | 4.92e-07 | 120 |
mesoderm-derived structure | 4.92e-07 | 120 |
presumptive mesoderm | 4.92e-07 | 120 |
spleen | 5.38e-07 | 6 |
cavity lining | 5.38e-07 | 6 |
serous membrane | 5.38e-07 | 6 |
gastrointestinal system mesentery | 5.38e-07 | 6 |
stomach region | 5.38e-07 | 6 |
mesentery | 5.38e-07 | 6 |
gastrointestinal system serosa | 5.38e-07 | 6 |
mesentery of stomach | 5.38e-07 | 6 |
gut mesentery | 5.38e-07 | 6 |
dorsal mesentery | 5.38e-07 | 6 |
dorsal mesogastrium | 5.38e-07 | 6 |
peritoneal cavity | 5.38e-07 | 6 |
spleen primordium | 5.38e-07 | 6 |