FFCP PHASE1:Mm9::chr4:63047044..63047062,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1740|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:63047044..63047062,+|id=chr4:63047044..63047062,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,8.98e-07,3;DOID:4045,8.98e-07,3|ontology_enrichment_uberon=UBERON:0002193!3.78e-21!48;UBERON:0004177!2.45e-19!29;UBERON:0002390!2.73e-19!45;UBERON:0003061!2.73e-19!45;UBERON:0003408!2.79e-17!24;UBERON:0002370!5.25e-16!23;UBERON:0000974!5.25e-16!23;UBERON:0004807!5.25e-16!23;UBERON:0005058!5.25e-16!23;UBERON:0003351!5.25e-16!23;UBERON:0009113!5.25e-16!23;UBERON:0003295!5.25e-16!23;UBERON:0009722!5.25e-16!23;UBERON:0005562!5.25e-16!23;UBERON:0007690!5.25e-16!23;UBERON:0006562!3.77e-15!24;UBERON:0001557!3.77e-15!24;UBERON:0001042!3.77e-15!24;UBERON:0008814!3.77e-15!24;UBERON:0009145!3.77e-15!24;UBERON:0002405!3.46e-13!70;UBERON:0000072!5.74e-13!27;UBERON:0003081!2.72e-11!88;UBERON:0000063!2.98e-10!35;UBERON:0005057!1.08e-09!51;UBERON:0001004!6.89e-09!42;UBERON:0000065!4.75e-08!41|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.47e-22,23;UBERON:0000974,3.47e-22,23;UBERON:0004807,3.47e-22,23;UBERON:0005058,3.47e-22,23;UBERON:0003351,3.47e-22,23;UBERON:0009113,3.47e-22,23;UBERON:0003295,3.47e-22,23;UBERON:0009722,3.47e-22,23;UBERON:0005562,3.47e-22,23;UBERON:0007690,3.47e-22,23;UBERON:0006562,3.42e-21,24;UBERON:0003408,3.42e-21,24;UBERON:0001557,3.42e-21,24;UBERON:0001042,3.42e-21,24;UBERON:0008814,3.42e-21,24;UBERON:0009145,3.42e-21,24;UBERON:0004177,1.81e-20,29;UBERON:0005057,1.81e-20,29;UBERON:0000072,1.19e-18,27;UBERON:0000077,1.23e-16,35;UBERON:0002193,4.84e-16,48;UBERON:0002405,4.84e-16,48;UBERON:0002390,8.46e-15,45;UBERON:0003061,8.46e-15,45;UBERON:0007811,1.48e-13,36;UBERON:0000065,1.08e-11,41;UBERON:0001004,2.26e-11,42;UBERON:0000153,4.57e-11,43;UBERON:0000490,1.81e-09,66;UBERON:0003929,2.88e-08,55;UBERON:0002368,1.97e-07,60|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.281577444303333,0.234064526321993,0,0.0797721589953364,0,0,0,0.202475267389826,0,1.73504190947031,0.685572168028694,0.42438965179803,0,0.198581902401771,0,0.639969691173627,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0.7813353445238,1.0470474879476,1.76469446409304,3.41522742479223,3.39857247121808,0,0,0,0,0,0,0,0,0,1.17447824240415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0.292399974850665,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0.925972636848558,0,0.410082683163076,1.14389086603261,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0.102710957164827,0.77952493786677,1.61124026100733,2.38417625737518,2.16351809135944,2.80610101631697,3.83672509802961,3.12447907285499,2.31900225814733,1.55932609183604,3.07877893249054,4.20756847853648,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr4:63047044..63047062,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1740 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:63047044..63047062,+ | |||
|description=CAGE_peak_at_chr4:63047044..63047062,+ | |||
|id=chr4:63047044..63047062,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.98e-07,3;DOID:4045,8.98e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.78e-21!48;UBERON:0004177!2.45e-19!29;UBERON:0002390!2.73e-19!45;UBERON:0003061!2.73e-19!45;UBERON:0003408!2.79e-17!24;UBERON:0002370!5.25e-16!23;UBERON:0000974!5.25e-16!23;UBERON:0004807!5.25e-16!23;UBERON:0005058!5.25e-16!23;UBERON:0003351!5.25e-16!23;UBERON:0009113!5.25e-16!23;UBERON:0003295!5.25e-16!23;UBERON:0009722!5.25e-16!23;UBERON:0005562!5.25e-16!23;UBERON:0007690!5.25e-16!23;UBERON:0006562!3.77e-15!24;UBERON:0001557!3.77e-15!24;UBERON:0001042!3.77e-15!24;UBERON:0008814!3.77e-15!24;UBERON:0009145!3.77e-15!24;UBERON:0002405!3.46e-13!70;UBERON:0000072!5.74e-13!27;UBERON:0003081!2.72e-11!88;UBERON:0000063!2.98e-10!35;UBERON:0005057!1.08e-09!51;UBERON:0001004!6.89e-09!42;UBERON:0000065!4.75e-08!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.47e-22,23;UBERON:0000974,3.47e-22,23;UBERON:0004807,3.47e-22,23;UBERON:0005058,3.47e-22,23;UBERON:0003351,3.47e-22,23;UBERON:0009113,3.47e-22,23;UBERON:0003295,3.47e-22,23;UBERON:0009722,3.47e-22,23;UBERON:0005562,3.47e-22,23;UBERON:0007690,3.47e-22,23;UBERON:0006562,3.42e-21,24;UBERON:0003408,3.42e-21,24;UBERON:0001557,3.42e-21,24;UBERON:0001042,3.42e-21,24;UBERON:0008814,3.42e-21,24;UBERON:0009145,3.42e-21,24;UBERON:0004177,1.81e-20,29;UBERON:0005057,1.81e-20,29;UBERON:0000072,1.19e-18,27;UBERON:0000077,1.23e-16,35;UBERON:0002193,4.84e-16,48;UBERON:0002405,4.84e-16,48;UBERON:0002390,8.46e-15,45;UBERON:0003061,8.46e-15,45;UBERON:0007811,1.48e-13,36;UBERON:0000065,1.08e-11,41;UBERON:0001004,2.26e-11,42;UBERON:0000153,4.57e-11,43;UBERON:0000490,1.81e-09,66;UBERON:0003929,2.88e-08,55;UBERON:0002368,1.97e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.281577444303333,0.234064526321993,0,0.0797721589953364,0,0,0,0.202475267389826,0,1.73504190947031,0.685572168028694,0.42438965179803,0,0.198581902401771,0,0.639969691173627,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0.7813353445238,1.0470474879476,1.76469446409304,3.41522742479223,3.39857247121808,0,0,0,0,0,0,0,0,0,1.17447824240415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,1.55362730188303,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0.292399974850665,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.575392274901621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0.925972636848558,0,0.410082683163076,1.14389086603261,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0.102710957164827,0.77952493786677,1.61124026100733,2.38417625737518,2.16351809135944,2.80610101631697,3.83672509802961,3.12447907285499,2.31900225814733,1.55932609183604,3.07877893249054,4.20756847853648,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr4:63047044..63047062,+ | |||
}} |
Latest revision as of 16:34, 5 August 2015
Short description: | p@chr4:63047044..63047062, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:63047044..63047062, + |
Coexpression cluster: | MCL_coexpression_mm9:1740 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.47e-22 | 23 |
neck | 3.47e-22 | 23 |
respiratory system epithelium | 3.47e-22 | 23 |
hemolymphoid system gland | 3.47e-22 | 23 |
pharyngeal epithelium | 3.47e-22 | 23 |
thymic region | 3.47e-22 | 23 |
pharyngeal gland | 3.47e-22 | 23 |
entire pharyngeal arch endoderm | 3.47e-22 | 23 |
thymus primordium | 3.47e-22 | 23 |
early pharyngeal endoderm | 3.47e-22 | 23 |
pharynx | 3.42e-21 | 24 |
gland of gut | 3.42e-21 | 24 |
upper respiratory tract | 3.42e-21 | 24 |
chordate pharynx | 3.42e-21 | 24 |
pharyngeal arch system | 3.42e-21 | 24 |
pharyngeal region of foregut | 3.42e-21 | 24 |
hemopoietic organ | 1.81e-20 | 29 |
immune organ | 1.81e-20 | 29 |
segment of respiratory tract | 1.19e-18 | 27 |
mixed endoderm/mesoderm-derived structure | 1.23e-16 | 35 |
hemolymphoid system | 4.84e-16 | 48 |
immune system | 4.84e-16 | 48 |
hematopoietic system | 8.46e-15 | 45 |
blood island | 8.46e-15 | 45 |
craniocervical region | 1.48e-13 | 36 |
respiratory tract | 1.08e-11 | 41 |
respiratory system | 2.26e-11 | 42 |
anterior region of body | 4.57e-11 | 43 |
unilaminar epithelium | 1.81e-09 | 66 |
gut epithelium | 2.88e-08 | 55 |
endocrine gland | 1.97e-07 | 60 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.98e-07 | 3 |
muscle cancer | 8.98e-07 | 3 |