FFCP PHASE1:Mm9::chr4:75787979..75787990,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=719|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:75787979..75787990,-|id=chr4:75787979..75787990,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!2.26e-08!114;UBERON:0002021!2.64e-08!10;UBERON:0000411!2.64e-08!10;UBERON:0001950!2.64e-08!10;UBERON:0000955!6.84e-08!50;UBERON:0006238!6.84e-08!50;UBERON:0002616!1.44e-07!49;UBERON:0000033!2.65e-07!63;UBERON:0003056!2.84e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.19e-17,10;UBERON:0000411,5.19e-17,10;UBERON:0001950,5.19e-17,10;UBERON:0002619,2.14e-09,17;UBERON:0002346,3.49e-08,64;UBERON:0003075,3.49e-08,64;UBERON:0007284,3.49e-08,64;UBERON:0000956,2.49e-07,21;UBERON:0001869,2.49e-07,21;UBERON:0000203,2.49e-07,21;UBERON:0000025,5.46e-07,114;UBERON:0002616,5.48e-07,46;UBERON:0001049,5.90e-07,52;UBERON:0005068,5.90e-07,52;UBERON:0006241,5.90e-07,52;UBERON:0007135,5.90e-07,52;UBERON:0000955,8.81e-07,47;UBERON:0006238,8.81e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0.893811366596314,1.0752457327937,0.131886287730194,0.0914876436024097,0.52091337055676,0.279182999001381,0,1.37518422999129,0,0.284743361598206,0,0,0,0,0,0,1.07940638327563,0,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.470354828542819,0,0,0.289198713839823,0,0.647067399789637,0.883366073841574,0.484875253135222,0,1.17112318804619,0.41889341362691,0,0,0,0,0.898743836428936,0.915001205637253,0.251308704225729,0.521472960576829,1.53429274398198,0.20778804455956,1.1356888414743,0.305518091550949,0,0,0,0.130120442962704,0,0,1.35634336052144,1.7009124787832,2.43416068541215,0.749613796477831,0.517406741478031,0.431135985865684,1.32374256117473,0.351902248327898,0,2.50242524303038,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.414251545071004,0.703578179943289,0.180062061461015,0.710234206755631,0.393528463494808,1.07986979021165,0.930135779001631,0.536546802799238,0.583826711835847,0.658239399653922,0.492502392237286,0,0,0,0,0.210289948564127,0.411618449517138,0,0,0.426576501070468,0.696710015581316,0.128867461322093,0.605050573870028,0,0,0,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0,0.199141273254367,0,1.02823661348756,0,1.01825663922657,0.969762435838129,0.98190147846446,1.26473074248515,0.295220295959204,0.470996183524124,0.246794327843601,0.592905254174298,0,0,0.449724224769707,0,0,0,0.287696137450811,0.162135226775035,0.823684239564244,4.31304619582064,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0.814824882210129,0.339490171550376,0.938760993154008,1.67506257441816,0.476087281772027,0.780534591431195,1.10344600874334,1.7717175171902,2.07291199254733,1.14704320301017,0.518054945597687,0.289298117163023,0,0,0,0,1.12385412991454,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.709700426041343,0,0.651547837414304,0,1.32745138339963,0,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0.900305470156551,0,0.643011105094777,0,0.356737635204141,0.329098041204242,0,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0.291480836629851,1.48340241608408,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.258319646955462,0.675824501963113,0.821500670520278,0.39061315453185,0.419437377702843,0.483168241652012,0.576060012515731,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.36630324853453,0,0,6.7770221114048,1.84130094602871,5.72895513439397,4.1244763762485,0.685082519770642,2.2661816921691,0.675022500231806,1.35096360967266,4.53142408984205,2.07104124700728,0.103787347584177,0.798049746802062,0,0.486213434136588,0,0,0.666740183404846,0.618105171716683,0,0.758091635291392,0.25347929989024,0,0.749132059759059,0.576226371643824,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.588795680537589,0.685738504770831,1.06485483695602,0.476872379894642,0.581385666529314,0.282328141245992,0.507687647350059,0.73171189149109,1.05227884575137,0.407412341537585,0.561142271657738,0.474540072496697,0.985044823755635,0,0.464810523557898,0.385813221962283,0.249810577937946,0.233931608445408,0,0.57386499620653,0,0|short_description=p@chr4:75787979..75787990,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=719 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:75787979..75787990,- | |||
|description=CAGE_peak_at_chr4:75787979..75787990,- | |||
|id=chr4:75787979..75787990,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.26e-08!114;UBERON:0002021!2.64e-08!10;UBERON:0000411!2.64e-08!10;UBERON:0001950!2.64e-08!10;UBERON:0000955!6.84e-08!50;UBERON:0006238!6.84e-08!50;UBERON:0002616!1.44e-07!49;UBERON:0000033!2.65e-07!63;UBERON:0003056!2.84e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.19e-17,10;UBERON:0000411,5.19e-17,10;UBERON:0001950,5.19e-17,10;UBERON:0002619,2.14e-09,17;UBERON:0002346,3.49e-08,64;UBERON:0003075,3.49e-08,64;UBERON:0007284,3.49e-08,64;UBERON:0000956,2.49e-07,21;UBERON:0001869,2.49e-07,21;UBERON:0000203,2.49e-07,21;UBERON:0000025,5.46e-07,114;UBERON:0002616,5.48e-07,46;UBERON:0001049,5.90e-07,52;UBERON:0005068,5.90e-07,52;UBERON:0006241,5.90e-07,52;UBERON:0007135,5.90e-07,52;UBERON:0000955,8.81e-07,47;UBERON:0006238,8.81e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311068836925433,0,0.210324961351382,0,0,0.122490799214954,0,0,0,0.893811366596314,1.0752457327937,0.131886287730194,0.0914876436024097,0.52091337055676,0.279182999001381,0,1.37518422999129,0,0.284743361598206,0,0,0,0,0,0,1.07940638327563,0,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0,0,0.173485326766136,0.304465478312141,0,0.150722640552623,0.470354828542819,0,0,0.289198713839823,0,0.647067399789637,0.883366073841574,0.484875253135222,0,1.17112318804619,0.41889341362691,0,0,0,0,0.898743836428936,0.915001205637253,0.251308704225729,0.521472960576829,1.53429274398198,0.20778804455956,1.1356888414743,0.305518091550949,0,0,0,0.130120442962704,0,0,1.35634336052144,1.7009124787832,2.43416068541215,0.749613796477831,0.517406741478031,0.431135985865684,1.32374256117473,0.351902248327898,0,2.50242524303038,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0,0.414251545071004,0.703578179943289,0.180062061461015,0.710234206755631,0.393528463494808,1.07986979021165,0.930135779001631,0.536546802799238,0.583826711835847,0.658239399653922,0.492502392237286,0,0,0,0,0.210289948564127,0.411618449517138,0,0,0.426576501070468,0.696710015581316,0.128867461322093,0.605050573870028,0,0,0,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0,0.199141273254367,0,1.02823661348756,0,1.01825663922657,0.969762435838129,0.98190147846446,1.26473074248515,0.295220295959204,0.470996183524124,0.246794327843601,0.592905254174298,0,0,0.449724224769707,0,0,0,0.287696137450811,0.162135226775035,0.823684239564244,4.31304619582064,0,0.624075346229121,0.252578877947112,0.179397413521912,0,0.184753190166605,0,0.814824882210129,0.339490171550376,0.938760993154008,1.67506257441816,0.476087281772027,0.780534591431195,1.10344600874334,1.7717175171902,2.07291199254733,1.14704320301017,0.518054945597687,0.289298117163023,0,0,0,0,1.12385412991454,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0.709700426041343,0,0.651547837414304,0,1.32745138339963,0,0.604647113929502,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0.900305470156551,0,0.643011105094777,0,0.356737635204141,0.329098041204242,0,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0.291480836629851,1.48340241608408,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.813277868507395,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.258319646955462,0.675824501963113,0.821500670520278,0.39061315453185,0.419437377702843,0.483168241652012,0.576060012515731,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0.36630324853453,0,0,6.7770221114048,1.84130094602871,5.72895513439397,4.1244763762485,0.685082519770642,2.2661816921691,0.675022500231806,1.35096360967266,4.53142408984205,2.07104124700728,0.103787347584177,0.798049746802062,0,0.486213434136588,0,0,0.666740183404846,0.618105171716683,0,0.758091635291392,0.25347929989024,0,0.749132059759059,0.576226371643824,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.588795680537589,0.685738504770831,1.06485483695602,0.476872379894642,0.581385666529314,0.282328141245992,0.507687647350059,0.73171189149109,1.05227884575137,0.407412341537585,0.561142271657738,0.474540072496697,0.985044823755635,0,0.464810523557898,0.385813221962283,0.249810577937946,0.233931608445408,0,0.57386499620653,0,0 | |||
|short_description=p@chr4:75787979..75787990,- | |||
}} |
Latest revision as of 17:36, 5 August 2015
Short description: | p@chr4:75787979..75787990, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:75787979..75787990, - |
Coexpression cluster: | MCL_coexpression_mm9:719 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.19e-17 | 10 |
visual cortex | 5.19e-17 | 10 |
neocortex | 5.19e-17 | 10 |
regional part of cerebral cortex | 2.14e-09 | 17 |
neurectoderm | 3.49e-08 | 64 |
neural plate | 3.49e-08 | 64 |
presumptive neural plate | 3.49e-08 | 64 |
cerebral cortex | 2.49e-07 | 21 |
cerebral hemisphere | 2.49e-07 | 21 |
pallium | 2.49e-07 | 21 |
tube | 5.46e-07 | 114 |
regional part of brain | 5.48e-07 | 46 |
neural tube | 5.90e-07 | 52 |
neural rod | 5.90e-07 | 52 |
future spinal cord | 5.90e-07 | 52 |
neural keel | 5.90e-07 | 52 |
brain | 8.81e-07 | 47 |
future brain | 8.81e-07 | 47 |