Personal tools

FFCP PHASE1:Mm9::chr3:102538879..102538900,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=70747|HGNC=|MCL_coexpression_id=20|UniProt=Q922J6|association_with_transcript=186bp_to_NM_027533,uc008qrw.1_5end|description=CAGE_peak_1_at_Tspan2_5end|id=chr3:102538879..102538900,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.18e-09!50;UBERON:0006238!1.18e-09!50;UBERON:0001049!1.28e-09!52;UBERON:0005068!1.28e-09!52;UBERON:0006241!1.28e-09!52;UBERON:0007135!1.28e-09!52;UBERON:0002616!3.18e-09!49;UBERON:0001017!1.68e-08!73;UBERON:0005743!1.68e-08!73;UBERON:0000073!7.08e-08!75;UBERON:0001016!7.08e-08!75;UBERON:0000033!1.08e-07!63;UBERON:0004111!2.82e-07!122;UBERON:0003080!8.53e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.33e-10,54;UBERON:0001049,6.45e-09,52;UBERON:0005068,6.45e-09,52;UBERON:0006241,6.45e-09,52;UBERON:0007135,6.45e-09,52;UBERON:0000955,1.96e-07,47;UBERON:0006238,1.96e-07,47;UBERON:0002346,2.61e-07,64;UBERON:0003075,2.61e-07,64;UBERON:0007284,2.61e-07,64;UBERON:0001017,3.25e-07,73;UBERON:0002616,4.92e-07,46|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0.685572168028694,0.84877930359606,9.60989178707088,30.0851582138682,35.7843711120341,0.159992422793407,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,2.51118978442145,2.3440060335714,2.61761871986899,1.76469446409304,2.04913645487534,2.91306211818692,0,0,0,0,0.872100625521786,0,0,0.419959264876088,1.43752564364972,1.34226084846189,0,0,0.514518872071894,0.286533439938757,0,0.809265843438391,0.528990979272033,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,0.829516898467821,0.540023753326763,0.420649922702764,24.8516356431309,16.565140571371,0.734944795289724,0.670918297127655,0.919218786610021,29.731287869835,58.6084881811012,58.8313022371413,0.791317726381163,0.457438218012048,1.04182674111352,48.2986588272389,39.9561453122493,59.4385183851791,7.07108605136802,5.55249555116501,1.86399445825301,0.227178579999552,1.058001841495,1.44932244350839,0,0,0,0,0,2.38755514223978,0,0,0,3.09855523508697,0,0,0,0,0,0,2.39786147410026,0.258937883647172,0.742210695324124,0.867426633830679,1.82679286987285,0,1.20578112442098,1.41106448562846,0.125666591329675,1.23597483867187,7.51916655983541,6.19227386364912,5.82360659810673,2.65009822152472,1.93950101254089,3.72783522436244,15.2246014446005,50.0577629284158,0.510914110417183,2.99537811264801,2.39961092397363,5.20987930999565,46.7346794943047,61.7625813805146,3.26701315493447,26.7689453096106,49.3530832647538,49.0379785160562,147.801790654727,5.09196819251581,3.73220911830279,0.758168275301024,1.26265113531884,0.260240885925407,0,1.26043490863744,1.35634336052144,1.36072998302656,1.2811372028485,1.68663104207512,18.3679393224701,0.862271971731369,0.756424320671277,0.351902248327898,1.53437012699302,1.66828349535359,1.0447564995665,2.05782136407943,1.39323986772945,3.51106593656617,2.31613116403244,0.568326998791185,6.00664740352955,3.51789089971644,3.42117916775928,3.55117103377815,5.1158700254325,2.93107514486019,6.74348439776183,3.75582761959467,5.48797109125697,5.26591519723137,4.26835406605648,2.59420190546738,2.92399974850665,2.19550115291051,3.62357330653004,35.7492912559016,1.74937841044784,0,1.05780226665418,3.41261200856374,3.25131340604614,3.60828891701861,4.23535401709019,2.66853652613844,3.04361001780095,2.84717436926707,4.6115707322723,6.03204501120647,3.58121649674071,5.8489226135736,1.79763881730844,3.8904848977445,3.18626037206988,0.569003702859245,1.37098215131675,2.25415471346161,2.64746726198909,1.93952487167626,2.59502533594179,2.46622494784603,1.03327103585722,0.941992367048249,1.23397163921801,0.592905254174298,1.00107063429656,1.17935397067922,0.224862112384854,0.202860121388503,0.72353147925725,0.763877555344259,2.01387296215567,0.162135226775035,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,28.6367444758237,2.08440552947533,1.46668478797823,2.20668611507745,1.40814148973101,6.03022526790537,18.8054476299951,65.7600393280782,11.0344600874334,10.1873757238436,12.437471955284,15.0754249538479,12.6060036762104,29.9423551263729,0,0,1.96705709207614,1.93155722413313,64.3807865851046,224.343168137477,0,3.28212205365685,3.15508219416257,1.95219372148319,2.80050417052639,0.955875191810208,2.22798674082394,2.26461224631066,1.21443210502468,2.63030272120181,3.16230222357219,13.1741739732941,2.6968616189571,3.38324646967785,2.76907830901079,11.2179683621324,0,1.69946445308487,0.906970670894253,0.754420319023592,0.590603785761546,3.07435147943927,2.84271122485043,2.54473610634254,3.20847640546249,2.84433082142234,0,0,13.2771446243977,2.88097750450096,2.97524972700335,7.28745919107414,15.7832807941623,12.8425548673491,12.0120785039548,3.65357938937519,3.28540391289194,1.0591603543191,2.20528398054962,0.65954501176592,3.06782410722221,2.65376869683886,1.07435109602823,1.80554989719567,2.33184669303881,75.653523220288,1.19609616558497,0.82554747185289,1.48155621895769,0.188368457004691,1.23024804948923,0.686334519619568,4.58941760983409,4.3384950220334,5.66619892598138,1.90934123603023,1.42351197111511,3.86306987541013,3.34816556547584,4.18176592028937,6.55087691238533,9.71023293970709,11.2408699786457,7.85267825952089,8.94343315713371,4.34937519160848,0,0.598066184175915,0.827292452285488,2.13896307178452,1.6790777052105,1.01373675294467,1.64300134104056,2.47388331203505,1.25831213310853,0.241584120826006,0.576060012515731,5.05617793005085,5.87903124341476,8.31958753035101,5.58659538804519,5.90788095702689,2.98022032171897,4.08664528367894,4.72606486958647,4.54349024766664,3.73413352609499,2.31900225814733,3.11865218367208,3.75226182397285,6.66198342434943,2.0405734525369,1.10992976687032,0.269141569828427,0.503653849092235,10.8186172658027,9.57180624801028,7.8755198434924,2.57242054894879,5.01572104035363,19.2015626489803,19.3336599333014,21.7700295106971,14.6075204992134,28.773465830367,24.1726047164704,12.8254275044043,9.00642406448441,12.2348450425735,10.3552062350364,0.518936737920883,1.99512436700516,0.682934423016537,1.21553358534147,0.209613162627982,0.735374033800057,2.66696073361938,2.26638562962784,2.88827288632634,2.77966932940177,2.5347929989024,1.88626341386076,3.27745276144588,2.30490548657529,2.46972516509137,1.90517476513229,2.31768651889711,2.89363830695558,0.824171801606613,1.03039244094078,2.05721551431249,1.59728225543404,2.38436189947321,2.0348498328526,2.07040636913727,2.11536519729191,1.82927972872773,1.05227884575137,2.17286582153379,1.12228454331548,2.01679530811096,2.65962102414021,1.63692417267876,2.01417893541756,2.50778594275484,1.49886346762768,2.8071793013449,5.37177635120746,4.20834330551455,8.38247392654159,8.11537424671475|short_description=p1@Tspan2}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:70747
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=uniprot:Q922J6
|association_with_transcript=186bp_to_NM_027533,uc008qrw.1_5end
|cluster_id=chr3:102538879..102538900,+
|description=CAGE_peak_1_at_Tspan2_5end
|id=chr3:102538879..102538900,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!1.18e-09!50;UBERON:0006238!1.18e-09!50;UBERON:0001049!1.28e-09!52;UBERON:0005068!1.28e-09!52;UBERON:0006241!1.28e-09!52;UBERON:0007135!1.28e-09!52;UBERON:0002616!3.18e-09!49;UBERON:0001017!1.68e-08!73;UBERON:0005743!1.68e-08!73;UBERON:0000073!7.08e-08!75;UBERON:0001016!7.08e-08!75;UBERON:0000033!1.08e-07!63;UBERON:0004111!2.82e-07!122;UBERON:0003080!8.53e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.33e-10,54;UBERON:0001049,6.45e-09,52;UBERON:0005068,6.45e-09,52;UBERON:0006241,6.45e-09,52;UBERON:0007135,6.45e-09,52;UBERON:0000955,1.96e-07,47;UBERON:0006238,1.96e-07,47;UBERON:0002346,2.61e-07,64;UBERON:0003075,2.61e-07,64;UBERON:0007284,2.61e-07,64;UBERON:0001017,3.25e-07,73;UBERON:0002616,4.92e-07,46
|phase1_expression=0.960893082628764,0,0,0,0,0.16787927191189,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0.685572168028694,0.84877930359606,9.60989178707088,30.0851582138682,35.7843711120341,0.159992422793407,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,2.51118978442145,2.3440060335714,2.61761871986899,1.76469446409304,2.04913645487534,2.91306211818692,0,0,0,0,0.872100625521786,0,0,0.419959264876088,1.43752564364972,1.34226084846189,0,0,0.514518872071894,0.286533439938757,0,0.809265843438391,0.528990979272033,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,0.829516898467821,0.540023753326763,0.420649922702764,24.8516356431309,16.565140571371,0.734944795289724,0.670918297127655,0.919218786610021,29.731287869835,58.6084881811012,58.8313022371413,0.791317726381163,0.457438218012048,1.04182674111352,48.2986588272389,39.9561453122493,59.4385183851791,7.07108605136802,5.55249555116501,1.86399445825301,0.227178579999552,1.058001841495,1.44932244350839,0,0,0,0,0,2.38755514223978,0,0,0,3.09855523508697,0,0,0,0,0,0,2.39786147410026,0.258937883647172,0.742210695324124,0.867426633830679,1.82679286987285,0,1.20578112442098,1.41106448562846,0.125666591329675,1.23597483867187,7.51916655983541,6.19227386364912,5.82360659810673,2.65009822152472,1.93950101254089,3.72783522436244,15.2246014446005,50.0577629284158,0.510914110417183,2.99537811264801,2.39961092397363,5.20987930999565,46.7346794943047,61.7625813805146,3.26701315493447,26.7689453096106,49.3530832647538,49.0379785160562,147.801790654727,5.09196819251581,3.73220911830279,0.758168275301024,1.26265113531884,0.260240885925407,0,1.26043490863744,1.35634336052144,1.36072998302656,1.2811372028485,1.68663104207512,18.3679393224701,0.862271971731369,0.756424320671277,0.351902248327898,1.53437012699302,1.66828349535359,1.0447564995665,2.05782136407943,1.39323986772945,3.51106593656617,2.31613116403244,0.568326998791185,6.00664740352955,3.51789089971644,3.42117916775928,3.55117103377815,5.1158700254325,2.93107514486019,6.74348439776183,3.75582761959467,5.48797109125697,5.26591519723137,4.26835406605648,2.59420190546738,2.92399974850665,2.19550115291051,3.62357330653004,35.7492912559016,1.74937841044784,0,1.05780226665418,3.41261200856374,3.25131340604614,3.60828891701861,4.23535401709019,2.66853652613844,3.04361001780095,2.84717436926707,4.6115707322723,6.03204501120647,3.58121649674071,5.8489226135736,1.79763881730844,3.8904848977445,3.18626037206988,0.569003702859245,1.37098215131675,2.25415471346161,2.64746726198909,1.93952487167626,2.59502533594179,2.46622494784603,1.03327103585722,0.941992367048249,1.23397163921801,0.592905254174298,1.00107063429656,1.17935397067922,0.224862112384854,0.202860121388503,0.72353147925725,0.763877555344259,2.01387296215567,0.162135226775035,0.274561413188081,1.43768206527355,0.744281895337007,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,28.6367444758237,2.08440552947533,1.46668478797823,2.20668611507745,1.40814148973101,6.03022526790537,18.8054476299951,65.7600393280782,11.0344600874334,10.1873757238436,12.437471955284,15.0754249538479,12.6060036762104,29.9423551263729,0,0,1.96705709207614,1.93155722413313,64.3807865851046,224.343168137477,0,3.28212205365685,3.15508219416257,1.95219372148319,2.80050417052639,0.955875191810208,2.22798674082394,2.26461224631066,1.21443210502468,2.63030272120181,3.16230222357219,13.1741739732941,2.6968616189571,3.38324646967785,2.76907830901079,11.2179683621324,0,1.69946445308487,0.906970670894253,0.754420319023592,0.590603785761546,3.07435147943927,2.84271122485043,2.54473610634254,3.20847640546249,2.84433082142234,0,0,13.2771446243977,2.88097750450096,2.97524972700335,7.28745919107414,15.7832807941623,12.8425548673491,12.0120785039548,3.65357938937519,3.28540391289194,1.0591603543191,2.20528398054962,0.65954501176592,3.06782410722221,2.65376869683886,1.07435109602823,1.80554989719567,2.33184669303881,75.653523220288,1.19609616558497,0.82554747185289,1.48155621895769,0.188368457004691,1.23024804948923,0.686334519619568,4.58941760983409,4.3384950220334,5.66619892598138,1.90934123603023,1.42351197111511,3.86306987541013,3.34816556547584,4.18176592028937,6.55087691238533,9.71023293970709,11.2408699786457,7.85267825952089,8.94343315713371,4.34937519160848,0,0.598066184175915,0.827292452285488,2.13896307178452,1.6790777052105,1.01373675294467,1.64300134104056,2.47388331203505,1.25831213310853,0.241584120826006,0.576060012515731,5.05617793005085,5.87903124341476,8.31958753035101,5.58659538804519,5.90788095702689,2.98022032171897,4.08664528367894,4.72606486958647,4.54349024766664,3.73413352609499,2.31900225814733,3.11865218367208,3.75226182397285,6.66198342434943,2.0405734525369,1.10992976687032,0.269141569828427,0.503653849092235,10.8186172658027,9.57180624801028,7.8755198434924,2.57242054894879,5.01572104035363,19.2015626489803,19.3336599333014,21.7700295106971,14.6075204992134,28.773465830367,24.1726047164704,12.8254275044043,9.00642406448441,12.2348450425735,10.3552062350364,0.518936737920883,1.99512436700516,0.682934423016537,1.21553358534147,0.209613162627982,0.735374033800057,2.66696073361938,2.26638562962784,2.88827288632634,2.77966932940177,2.5347929989024,1.88626341386076,3.27745276144588,2.30490548657529,2.46972516509137,1.90517476513229,2.31768651889711,2.89363830695558,0.824171801606613,1.03039244094078,2.05721551431249,1.59728225543404,2.38436189947321,2.0348498328526,2.07040636913727,2.11536519729191,1.82927972872773,1.05227884575137,2.17286582153379,1.12228454331548,2.01679530811096,2.65962102414021,1.63692417267876,2.01417893541756,2.50778594275484,1.49886346762768,2.8071793013449,5.37177635120746,4.20834330551455,8.38247392654159,8.11537424671475
|short_description=p1@Tspan2
}}

Revision as of 18:08, 5 August 2015

Short description:p1@Tspan2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tspan2_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 186bp_to_NM_027533, uc008qrw.1_5end
EntrezGene:70747
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tspan2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H230.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I935.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F124.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.57
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.73
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D329.73
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F358.61
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D758.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E448.30
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E539.96
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I659.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H17.52
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F55.82
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B215.22
cerebellum, neonate N30.CNhs11135.1395-42I250.06
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.21
corpora quadrigemina, adult.CNhs10501.16-22A446.73
corpus striatum, adult.CNhs10487.19-21D861.76
corpus striatum, neonate N00.CNhs11226.630-43F13.27
cortex, adult.CNhs10473.12-14D526.77
cortex, neonate N30.CNhs11107.1392-42F249.35
diencephalon, adult.CNhs10482.20-12F249.04
diencephalon, neonate N30.CNhs11201.1388-42B2147.80
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.09
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.73
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.69
eyeball, neonate N16.CNhs11188.777-19A218.37
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E96.01
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D43.55
heart, embryo E15.CNhs11017.431-16C85.12
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E56.74
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E35.49
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G12.59
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D23.62
hippocampus, adult.CNhs10478.13-16E835.75
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I53.41
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D83.61
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E94.61
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A55.85
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G72.60
kidney, neonate N10.CNhs11206.758-6D52.47
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H11.23
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B128.64
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A66.03
lung, embryo E18.CNhs10583.1287-20I618.81
lung, neonate N00.CNhs11224.640-42C665.76
lung, neonate N06.CNhs11212.683-20E511.03
lung, neonate N07.CNhs11111.715-19A310.19
lung, neonate N10.CNhs11219.750-23E612.44
lung, neonate N20.CNhs11109.822-18A415.08
lung, neonate N25.CNhs11119.1359-25C712.61
lung, neonate N30.CNhs11133.1394-42H229.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C264.38
medulla oblongata, neonate N30.CNhs11200.1396-42A3224.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.80
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I913.17
ovary, adult.CNhs10507.91-2I72.70
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G611.22
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G813.28
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C72.98
pituitary gland, embryo E14.CNhs11037.398-44A57.29
pituitary gland, embryo E15.CNhs10592.427-16B915.78
pituitary gland, embryo E16.CNhs11036.449-43F612.84
pituitary gland, embryo E17.CNhs11039.1265-44F512.01
pituitary gland, neonate N00.CNhs11190.1308-22E93.65
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H32.65
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C975.65
spleen, adult.CNhs10465.25-2G21.20
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.67
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G83.86
stomach, embryo E16.CNhs11022.459-17D43.35
stomach, embryo E17.CNhs11006.1035-18D54.18
stomach, embryo E18.CNhs10999.1286-20C66.55
stomach, neonate N03.CNhs11193.1340-24B89.71
stomach, neonate N07.CNhs11210.718-18A911.24
stomach, neonate N25.CNhs11104.1355-25E47.85
stomach, neonate N30.CNhs11134.1386-42I18.94
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I45.88
thymus, embryo E15.CNhs11005.430-45I28.32
thymus, embryo E16.CNhs11002.456-26C55.59
thymus, embryo E17.CNhs10581.478-18C15.91
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F84.09
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C44.54
thymus, neonate N07.CNhs11211.713-19D33.73
thymus, neonate N10.CNhs11194.748-24E42.32
thymus, neonate N20.CNhs11186.820-7A23.12
thymus, neonate N25.CNhs11125.1362-25G73.75
thymus, neonate N30.CNhs11132.1393-42G26.66
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E410.82
uterus, adult pregnant day19.CNhs10497.590-15F59.57
uterus, adult.CNhs10509.92-27E57.88
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.33
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.77
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C25.37
whole body, neonate N01.CNhs10576.659-23C64.21
whole body, neonate N06.CNhs10515.692-21D18.38
whole body, neonate N10.CNhs10518.761-6B48.12





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.33e-1054
neural tube6.45e-0952
neural rod6.45e-0952
future spinal cord6.45e-0952
neural keel6.45e-0952
brain1.96e-0747
future brain1.96e-0747
neurectoderm2.61e-0764
neural plate2.61e-0764
presumptive neural plate2.61e-0764
central nervous system3.25e-0773
regional part of brain4.92e-0746
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:102538879..102538900,%2B&oldid=3927439"