FFCP PHASE1:Mm9::chr6:49001848..49001855,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=38|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:49001848..49001855,+|id=chr6:49001848..49001855,+|ontology_enrichment_celltype=CL:0002092!1.22e-20!3;CL:0002540!1.22e-20!3;CL:0002194!3.31e-15!4;CL:0000766!3.31e-15!4;CL:0000576!3.31e-15!4;CL:0000235!3.31e-15!4;CL:0002009!3.31e-15!4;CL:0000040!3.31e-15!4;CL:0000559!3.31e-15!4;CL:0000557!6.27e-09!7|ontology_enrichment_celltype_v019_2=CL:0002092,4.90e-53,3;CL:0002540,4.90e-53,3;CL:0002194,3.89e-18,4;CL:0000766,3.89e-18,4;CL:0000234,3.89e-18,4;CL:0000576,3.89e-18,4;CL:0000235,3.89e-18,4;CL:0000864,3.89e-18,4;CL:0002009,3.89e-18,4;CL:0000040,3.89e-18,4;CL:0000559,3.89e-18,4;CL:0000473,7.87e-11,7;CL:0000557,7.87e-11,7;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0002476,6.19e-10,2;CL:0000878,7.56e-10,2;CL:0000129,7.56e-10,2;CL:0000219,1.10e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.61e-14!16;UBERON:0001474!1.80e-10!22;UBERON:0004765!1.80e-10!22;UBERON:0001434!1.80e-10!22;UBERON:0002204!4.43e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.04e-27,16;UBERON:0001474,2.26e-20,22;UBERON:0004765,2.26e-20,22;UBERON:0001434,2.26e-20,22;UBERON:0002204,3.12e-14,32;UBERON:0002390,2.64e-10,45;UBERON:0003061,2.64e-10,45;UBERON:0002384,4.29e-10,46;UBERON:0002193,1.07e-09,48;UBERON:0002405,1.07e-09,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,8.09909745553259,9.88866362566974,6.3943210345149,0,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52373851817817,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:49001848..49001855,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:49001848..49001855,+ | |||
|description=CAGE_peak_at_chr6:49001848..49001855,+ | |||
|id=chr6:49001848..49001855,+ | |||
|ontology_enrichment_celltype=CL:0002092!1.22e-20!3;CL:0002540!1.22e-20!3;CL:0002194!3.31e-15!4;CL:0000766!3.31e-15!4;CL:0000576!3.31e-15!4;CL:0000235!3.31e-15!4;CL:0002009!3.31e-15!4;CL:0000040!3.31e-15!4;CL:0000559!3.31e-15!4;CL:0000557!6.27e-09!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,4.90e-53,3;CL:0002540,4.90e-53,3;CL:0002194,3.89e-18,4;CL:0000766,3.89e-18,4;CL:0000234,3.89e-18,4;CL:0000576,3.89e-18,4;CL:0000235,3.89e-18,4;CL:0000864,3.89e-18,4;CL:0002009,3.89e-18,4;CL:0000040,3.89e-18,4;CL:0000559,3.89e-18,4;CL:0000473,7.87e-11,7;CL:0000557,7.87e-11,7;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0002476,6.19e-10,2;CL:0000878,7.56e-10,2;CL:0000129,7.56e-10,2;CL:0000219,1.10e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.61e-14!16;UBERON:0001474!1.80e-10!22;UBERON:0004765!1.80e-10!22;UBERON:0001434!1.80e-10!22;UBERON:0002204!4.43e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.04e-27,16;UBERON:0001474,2.26e-20,22;UBERON:0004765,2.26e-20,22;UBERON:0001434,2.26e-20,22;UBERON:0002204,3.12e-14,32;UBERON:0002390,2.64e-10,45;UBERON:0003061,2.64e-10,45;UBERON:0002384,4.29e-10,46;UBERON:0002193,1.07e-09,48;UBERON:0002405,1.07e-09,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,8.09909745553259,9.88866362566974,6.3943210345149,0,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.52373851817817,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:49001848..49001855,+ | |||
}} | |||
Latest revision as of 21:23, 5 August 2015
| Short description: | p@chr6:49001848..49001855, + |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr6:49001848..49001855, + |
| Coexpression cluster: | MCL_coexpression_mm9:38 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| bone marrow cell | 4.90e-53 | 3 |
| mesenchymal stem cell of the bone marrow | 4.90e-53 | 3 |
| monopoietic cell | 3.89e-18 | 4 |
| myeloid leukocyte | 3.89e-18 | 4 |
| phagocyte | 3.89e-18 | 4 |
| monocyte | 3.89e-18 | 4 |
| macrophage | 3.89e-18 | 4 |
| tissue-resident macrophage | 3.89e-18 | 4 |
| macrophage dendritic cell progenitor | 3.89e-18 | 4 |
| monoblast | 3.89e-18 | 4 |
| promonocyte | 3.89e-18 | 4 |
| defensive cell | 7.87e-11 | 7 |
| granulocyte monocyte progenitor cell | 7.87e-11 | 7 |
| connective tissue cell | 4.29e-10 | 46 |
| mesenchymal cell | 4.29e-10 | 46 |
| bone marrow macrophage | 6.19e-10 | 2 |
| central nervous system macrophage | 7.56e-10 | 2 |
| microglial cell | 7.56e-10 | 2 |
| motile cell | 1.10e-08 | 54 |
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 1.04e-27 | 16 |
| bone element | 2.26e-20 | 22 |
| skeletal element | 2.26e-20 | 22 |
| skeletal system | 2.26e-20 | 22 |
| musculoskeletal system | 3.12e-14 | 32 |
| hematopoietic system | 2.64e-10 | 45 |
| blood island | 2.64e-10 | 45 |
| connective tissue | 4.29e-10 | 46 |
| hemolymphoid system | 1.07e-09 | 48 |
| immune system | 1.07e-09 | 48 |