FFCP PHASE1:Mm9::chr8:113464831..113464848,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=20444|HGNC=|MCL_coexpression_id=9|UniProt=|association_with_transcript=27bp_to_ENSMUST00000138332_5end|description=CAGE_peak_9_at_St3gal2_5end|id=chr8:113464831..113464848,+|ontology_enrichment_celltype=CL:0000068!2.23e-07!3;CL:0002202!2.23e-07!3;CL:0000069!2.23e-07!3;CL:0002632!2.23e-07!3;CL:0002368!2.23e-07!3;CL:0000307!2.23e-07!3;CL:0000377!2.23e-07!3|ontology_enrichment_celltype_v019_2=CL:0000068,1.28e-26,3;CL:0002202,1.28e-26,3;CL:0000069,1.28e-26,3;CL:0002632,1.28e-26,3;CL:0002368,1.28e-26,3;CL:0000307,1.28e-26,3;CL:0000377,1.28e-26,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!2.50e-10!5;UBERON:0001003!2.50e-10!5;UBERON:0002097!2.50e-10!5;UBERON:0002199!2.50e-10!5;UBERON:0007029!2.50e-10!5;UBERON:0007376!2.50e-10!5;UBERON:0002416!2.50e-10!5;UBERON:0007383!2.50e-10!5;UBERON:0004175!2.95e-08!9;UBERON:0003126!2.23e-07!3;UBERON:0001005!2.23e-07!3;UBERON:0007196!2.23e-07!3;UBERON:0001558!2.23e-07!3;UBERON:0005631!3.39e-07!3;UBERON:0000478!3.39e-07!3;UBERON:0000158!3.39e-07!3;UBERON:0003975!5.07e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.28e-26,3;UBERON:0001005,1.28e-26,3;UBERON:0007196,1.28e-26,3;UBERON:0001558,1.28e-26,3;UBERON:0004175,2.70e-16,9;UBERON:0001301,3.66e-13,3;UBERON:0006555,3.66e-13,3;UBERON:0005103,3.66e-13,3;UBERON:0000083,3.66e-13,3;UBERON:0009201,3.66e-13,3;UBERON:0004819,3.66e-13,3;UBERON:0006553,3.66e-13,3;UBERON:0003074,3.66e-13,3;UBERON:0003060,3.66e-13,3;UBERON:0004871,8.30e-13,3;UBERON:0005631,1.86e-12,3;UBERON:0000478,1.86e-12,3;UBERON:0000158,1.86e-12,3;UBERON:0000996,2.48e-10,1;UBERON:0000080,4.16e-10,4;UBERON:0005904,4.16e-10,4;UBERON:0006947,4.16e-10,4;UBERON:0002120,4.16e-10,4;UBERON:0004054,4.16e-10,4;UBERON:0004875,4.16e-10,4;UBERON:0004876,4.16e-10,4;UBERON:0005721,4.16e-10,4;UBERON:0005754,4.16e-10,4;UBERON:0007297,4.16e-10,4;UBERON:0000305,5.62e-10,1;UBERON:0004122,3.41e-08,5;UBERON:0003975,5.54e-08,5;UBERON:0001008,6.84e-08,19;UBERON:0003103,2.92e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0.279972843250725,0,0,0,0,1.02903774414379,0,0.515672092277442,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5154372870785,1.01343946190039,2.02209778005913,0.11418387971906,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0.511430914660661,0,0,0,4.85187185379363,38.1611365234849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0.983609672260053,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,1.0591603543191,0,1.97863503529776,0.645857706783622,0.361877549568935,0.596861720015682,0.984845398470368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.62799699626633,0.671538465456314,0,0.375364950902364,0,2.78678892802786,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p9@St3gal2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20444 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=27bp_to_ENSMUST00000138332_5end | |||
|cluster_id=chr8:113464831..113464848,+ | |||
|description=CAGE_peak_9_at_St3gal2_5end | |||
|id=chr8:113464831..113464848,+ | |||
|ontology_enrichment_celltype=CL:0000068!2.23e-07!3;CL:0002202!2.23e-07!3;CL:0000069!2.23e-07!3;CL:0002632!2.23e-07!3;CL:0002368!2.23e-07!3;CL:0000307!2.23e-07!3;CL:0000377!2.23e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.28e-26,3;CL:0002202,1.28e-26,3;CL:0000069,1.28e-26,3;CL:0002632,1.28e-26,3;CL:0002368,1.28e-26,3;CL:0000307,1.28e-26,3;CL:0000377,1.28e-26,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!2.50e-10!5;UBERON:0001003!2.50e-10!5;UBERON:0002097!2.50e-10!5;UBERON:0002199!2.50e-10!5;UBERON:0007029!2.50e-10!5;UBERON:0007376!2.50e-10!5;UBERON:0002416!2.50e-10!5;UBERON:0007383!2.50e-10!5;UBERON:0004175!2.95e-08!9;UBERON:0003126!2.23e-07!3;UBERON:0001005!2.23e-07!3;UBERON:0007196!2.23e-07!3;UBERON:0001558!2.23e-07!3;UBERON:0005631!3.39e-07!3;UBERON:0000478!3.39e-07!3;UBERON:0000158!3.39e-07!3;UBERON:0003975!5.07e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.28e-26,3;UBERON:0001005,1.28e-26,3;UBERON:0007196,1.28e-26,3;UBERON:0001558,1.28e-26,3;UBERON:0004175,2.70e-16,9;UBERON:0001301,3.66e-13,3;UBERON:0006555,3.66e-13,3;UBERON:0005103,3.66e-13,3;UBERON:0000083,3.66e-13,3;UBERON:0009201,3.66e-13,3;UBERON:0004819,3.66e-13,3;UBERON:0006553,3.66e-13,3;UBERON:0003074,3.66e-13,3;UBERON:0003060,3.66e-13,3;UBERON:0004871,8.30e-13,3;UBERON:0005631,1.86e-12,3;UBERON:0000478,1.86e-12,3;UBERON:0000158,1.86e-12,3;UBERON:0000996,2.48e-10,1;UBERON:0000080,4.16e-10,4;UBERON:0005904,4.16e-10,4;UBERON:0006947,4.16e-10,4;UBERON:0002120,4.16e-10,4;UBERON:0004054,4.16e-10,4;UBERON:0004875,4.16e-10,4;UBERON:0004876,4.16e-10,4;UBERON:0005721,4.16e-10,4;UBERON:0005754,4.16e-10,4;UBERON:0007297,4.16e-10,4;UBERON:0000305,5.62e-10,1;UBERON:0004122,3.41e-08,5;UBERON:0003975,5.54e-08,5;UBERON:0001008,6.84e-08,19;UBERON:0003103,2.92e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,0,0,0,0,0.279972843250725,0,0,0,0,1.02903774414379,0,0.515672092277442,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5154372870785,1.01343946190039,2.02209778005913,0.11418387971906,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0.511430914660661,0,0,0,4.85187185379363,38.1611365234849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0.983609672260053,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,1.0591603543191,0,1.97863503529776,0.645857706783622,0.361877549568935,0.596861720015682,0.984845398470368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.62799699626633,0.671538465456314,0,0.375364950902364,0,2.78678892802786,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0.51776031175182,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p9@St3gal2 | |||
}} |
Revision as of 22:19, 5 August 2015
Short description: | p9@St3gal2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_St3gal2_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 27bp_to_ENSMUST00000138332_5end |
EntrezGene: | 20444 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.28e-26 | 3 |
epithelial cell of tracheobronchial tree | 1.28e-26 | 3 |
branched duct epithelial cell | 1.28e-26 | 3 |
epithelial cell of lower respiratory tract | 1.28e-26 | 3 |
respiratory epithelial cell | 1.28e-26 | 3 |
tracheal epithelial cell | 1.28e-26 | 3 |
tracheoblast | 1.28e-26 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.28e-26 | 3 |
respiratory airway | 1.28e-26 | 3 |
tracheobronchial tree | 1.28e-26 | 3 |
lower respiratory tract | 1.28e-26 | 3 |
internal genitalia | 2.70e-16 | 9 |
epididymis | 3.66e-13 | 3 |
excretory tube | 3.66e-13 | 3 |
mesonephric epithelium | 3.66e-13 | 3 |
mesonephric tubule | 3.66e-13 | 3 |
nephric duct | 3.66e-13 | 3 |
kidney epithelium | 3.66e-13 | 3 |
renal duct | 3.66e-13 | 3 |
mesonephric duct | 3.66e-13 | 3 |
pronephric duct | 3.66e-13 | 3 |
somatic layer of lateral plate mesoderm | 8.30e-13 | 3 |
extraembryonic membrane | 1.86e-12 | 3 |
extraembryonic structure | 1.86e-12 | 3 |
membranous layer | 1.86e-12 | 3 |
vagina | 2.48e-10 | 1 |
mesonephros | 4.16e-10 | 4 |
duct of male reproductive system | 4.16e-10 | 4 |
male genital duct | 4.16e-10 | 4 |
pronephros | 4.16e-10 | 4 |
internal male genitalia | 4.16e-10 | 4 |
nephrogenic cord | 4.16e-10 | 4 |
urogenital ridge | 4.16e-10 | 4 |
pronephric mesoderm | 4.16e-10 | 4 |
rostral part of nephrogenic cord | 4.16e-10 | 4 |
presumptive pronephric mesoderm | 4.16e-10 | 4 |
amnion | 5.62e-10 | 1 |
genitourinary system | 3.41e-08 | 5 |
internal female genitalia | 5.54e-08 | 5 |
renal system | 6.84e-08 | 19 |
compound organ | 2.92e-07 | 43 |