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FFCP PHASE1:Mm9::chr3:122432116..122432151,+: Difference between revisions

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{{FFCP|EntrezGene=242202|HGNC=|MCL_coexpression_id=1453|UniProt=Q8CG03|association_with_transcript=40bp_to_ENSMUST00000066728,NM_153422,uc008ret.2_5end|description=CAGE_peak_3_at_Pde5a_5end|id=chr3:122432116..122432151,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004921!6.38e-13!126;UBERON:0004185!6.38e-13!126;UBERON:0001007!8.02e-13!128;UBERON:0001555!8.02e-13!128;UBERON:0007026!8.02e-13!128;UBERON:0004119!1.20e-12!130;UBERON:0000925!1.20e-12!130;UBERON:0006595!1.20e-12!130;UBERON:0005409!1.78e-10!59;UBERON:0002048!2.69e-10!14;UBERON:0000117!2.69e-10!14;UBERON:0000171!2.69e-10!14;UBERON:0000170!2.69e-10!14;UBERON:0005597!2.69e-10!14;UBERON:0000118!2.69e-10!14;UBERON:0000468!1.94e-09!333;UBERON:0000922!5.63e-09!328;UBERON:0005178!7.85e-09!17;UBERON:0005181!7.85e-09!17;UBERON:0002224!7.85e-09!17;UBERON:0000915!7.85e-09!17;UBERON:0008947!7.85e-09!17;UBERON:0003258!7.85e-09!17;UBERON:0005157!1.63e-08!27;UBERON:0005153!2.08e-08!17;UBERON:0000065!3.56e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0004921,6.64e-15,114;UBERON:0001007,9.20e-15,116;UBERON:0001555,9.20e-15,116;UBERON:0007026,9.20e-15,116;UBERON:0004119,1.55e-14,118;UBERON:0000925,1.55e-14,118;UBERON:0006595,1.55e-14,118;UBERON:0005409,4.89e-13,47;UBERON:0002048,1.04e-10,14;UBERON:0000117,1.04e-10,14;UBERON:0000171,1.04e-10,14;UBERON:0000170,1.04e-10,14;UBERON:0005597,1.04e-10,14;UBERON:0000118,1.04e-10,14;UBERON:0005157,6.03e-10,20;UBERON:0005178,3.56e-09,17;UBERON:0005181,3.56e-09,17;UBERON:0002224,3.56e-09,17;UBERON:0000915,3.56e-09,17;UBERON:0008947,3.56e-09,17;UBERON:0003258,3.56e-09,17;UBERON:0005153,2.42e-08,17;UBERON:0000160,3.96e-08,31;UBERON:0000922,1.06e-07,320;UBERON:0000065,1.55e-07,41;UBERON:0001041,4.89e-07,80;UBERON:0001004,5.32e-07,42|phase1_expression=3.36312578920067,3.14077866875425,2.27499619694768,3.0246421130683,2.50447864973174,2.51818907867835,0.934450562382103,0.129123323441576,1.12630977721333,5.38348410540585,0.34243593645101,0.717949430958028,0.171200729931206,8.65461983948074,1.66554880907831,0.404950534779652,0.699561878128147,0.473193248037357,0.548457734422955,0.42438965179803,2.46625541438102,0,0,1.59992422793407,2.2940928106717,2.29692785646008,0.86152399231815,2.58565479223067,5.70070258369122,4.28451220591882,2.43903561720835,0,0,0,3.75507105676657,2.65975432573588,2.24586291888606,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0.218025156380447,0.219686182734472,0.388859798148567,0.419959264876088,0,0.167782606057736,0,0.336093799142464,0.771778308107841,2.57880095944881,1.03134418455488,0,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,1.45165457231869,1.4850653216486,0.841299845405528,0,0,1.10241719293459,0.479227355091182,2.75765635983006,0,0.255374676170375,0.153606533256243,0.791317726381163,0.548925861614458,0,0.558365998002762,0,0.45839474333043,0.589257170947335,0.711858403995515,0.931997229126503,0.075726193333184,0.0755715601067855,1.73918693221007,0.860423876981386,0,0,0,0,1.82577746171277,0,0,0,1.26759077799012,0,0,0,2.38140145112336,1.52015919285059,2.02209778005913,1.37020655662872,0,2.3750742250372,2.4287945747259,2.13125834818499,2.30615497256059,2.71300752994721,3.17489509266403,1.0053327306374,0.988779870937496,2.4581890676385,8.84610551949874,1.29413479957927,3.09178125844551,0.969750506270444,11.1835056730873,6.14839673724249,3.97948742945565,5.62005521458901,0.359445373517761,0,0.381210681219194,0.449371918214468,0,0.753926112677186,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,1.73126918545538,5.10068579501381,1.0108910337347,1.05220927943237,3.90361328888111,3.67843367093557,3.42118046630164,4.82255417074288,2.4493139694478,2.69038812598185,2.34254311399322,2.58703370739016,2.58681591519411,3.40390944302075,2.63926686245923,1.97276159184817,2.22437799380478,2.43776516565517,2.05782136407943,2.58744546864041,0,0,0,3.72826390563903,3.04883877975425,2.16074473753218,2.84093682702252,1.77087808572663,1.3884040159864,1.86027155800326,0.536546802799238,1.40118410840603,0.16455984991348,0.492502392237286,0.486412857275134,0.584799949701329,0.219550115291051,0.536825675041487,0,0.617427674275707,2.64335026387038,4.49565963328025,21.7554015545939,21.8302471548812,13.788818361464,9.27744213267376,5.11469500843202,7.41879941838981,4.2707615539006,6.58795818896044,6.53471542880701,6.16765063327568,7.40863531052657,7.19055526923377,2.59365659849633,5.57595565112228,2.0863469104839,2.74196430263349,4.50830942692322,2.64746726198909,1.74557238450863,2.10407459670956,1.83385957660346,1.32849133181642,0.784993639206874,0.246794327843601,0,4.67166296005063,4.12773889737726,2.24862112384854,4.05720242777006,1.4470629585145,2.5462585178142,3.74004978686054,1.29708181420028,0.823684239564244,1.43768206527355,2.60498663367952,1.24815069245824,0.252578877947112,0,0.482443521363367,10.9004382198297,17.8121927064256,22.6521317254416,19.0114496068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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:242202
|HGNC=
|MCL_coexpression_id=1453
|TSSclassifier=NA
|UniProt=uniprot:Q8CG03
|association_with_transcript=40bp_to_ENSMUST00000066728,NM_153422,uc008ret.2_5end
|cluster_id=chr3:122432116..122432151,+
|description=CAGE_peak_3_at_Pde5a_5end
|id=chr3:122432116..122432151,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004921,6.64e-15,114;UBERON:0001007,9.20e-15,116;UBERON:0001555,9.20e-15,116;UBERON:0007026,9.20e-15,116;UBERON:0004119,1.55e-14,118;UBERON:0000925,1.55e-14,118;UBERON:0006595,1.55e-14,118;UBERON:0005409,4.89e-13,47;UBERON:0002048,1.04e-10,14;UBERON:0000117,1.04e-10,14;UBERON:0000171,1.04e-10,14;UBERON:0000170,1.04e-10,14;UBERON:0005597,1.04e-10,14;UBERON:0000118,1.04e-10,14;UBERON:0005157,6.03e-10,20;UBERON:0005178,3.56e-09,17;UBERON:0005181,3.56e-09,17;UBERON:0002224,3.56e-09,17;UBERON:0000915,3.56e-09,17;UBERON:0008947,3.56e-09,17;UBERON:0003258,3.56e-09,17;UBERON:0005153,2.42e-08,17;UBERON:0000160,3.96e-08,31;UBERON:0000922,1.06e-07,320;UBERON:0000065,1.55e-07,41;UBERON:0001041,4.89e-07,80;UBERON:0001004,5.32e-07,42
|phase1_expression=3.36312578920067,3.14077866875425,2.27499619694768,3.0246421130683,2.50447864973174,2.51818907867835,0.934450562382103,0.129123323441576,1.12630977721333,5.38348410540585,0.34243593645101,0.717949430958028,0.171200729931206,8.65461983948074,1.66554880907831,0.404950534779652,0.699561878128147,0.473193248037357,0.548457734422955,0.42438965179803,2.46625541438102,0,0,1.59992422793407,2.2940928106717,2.29692785646008,0.86152399231815,2.58565479223067,5.70070258369122,4.28451220591882,2.43903561720835,0,0,0,3.75507105676657,2.65975432573588,2.24586291888606,0,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0.218025156380447,0.219686182734472,0.388859798148567,0.419959264876088,0,0.167782606057736,0,0.336093799142464,0.771778308107841,2.57880095944881,1.03134418455488,0,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,1.45165457231869,1.4850653216486,0.841299845405528,0,0,1.10241719293459,0.479227355091182,2.75765635983006,0,0.255374676170375,0.153606533256243,0.791317726381163,0.548925861614458,0,0.558365998002762,0,0.45839474333043,0.589257170947335,0.711858403995515,0.931997229126503,0.075726193333184,0.0755715601067855,1.73918693221007,0.860423876981386,0,0,0,0,1.82577746171277,0,0,0,1.26759077799012,0,0,0,2.38140145112336,1.52015919285059,2.02209778005913,1.37020655662872,0,2.3750742250372,2.4287945747259,2.13125834818499,2.30615497256059,2.71300752994721,3.17489509266403,1.0053327306374,0.988779870937496,2.4581890676385,8.84610551949874,1.29413479957927,3.09178125844551,0.969750506270444,11.1835056730873,6.14839673724249,3.97948742945565,5.62005521458901,0.359445373517761,0,0.381210681219194,0.449371918214468,0,0.753926112677186,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,1.73126918545538,5.10068579501381,1.0108910337347,1.05220927943237,3.90361328888111,3.67843367093557,3.42118046630164,4.82255417074288,2.4493139694478,2.69038812598185,2.34254311399322,2.58703370739016,2.58681591519411,3.40390944302075,2.63926686245923,1.97276159184817,2.22437799380478,2.43776516565517,2.05782136407943,2.58744546864041,0,0,0,3.72826390563903,3.04883877975425,2.16074473753218,2.84093682702252,1.77087808572663,1.3884040159864,1.86027155800326,0.536546802799238,1.40118410840603,0.16455984991348,0.492502392237286,0.486412857275134,0.584799949701329,0.219550115291051,0.536825675041487,0,0.617427674275707,2.64335026387038,4.49565963328025,21.7554015545939,21.8302471548812,13.788818361464,9.27744213267376,5.11469500843202,7.41879941838981,4.2707615539006,6.58795818896044,6.53471542880701,6.16765063327568,7.40863531052657,7.19055526923377,2.59365659849633,5.57595565112228,2.0863469104839,2.74196430263349,4.50830942692322,2.64746726198909,1.74557238450863,2.10407459670956,1.83385957660346,1.32849133181642,0.784993639206874,0.246794327843601,0,4.67166296005063,4.12773889737726,2.24862112384854,4.05720242777006,1.4470629585145,2.5462585178142,3.74004978686054,1.29708181420028,0.823684239564244,1.43768206527355,2.60498663367952,1.24815069245824,0.252578877947112,0,0.482443521363367,10.9004382198297,17.8121927064256,22.6521317254416,19.0114496068211,16.4283173801951,19.4307258632506,32.6119788013839,12.4885534628991,51.3890569786183,40.5280382057258,40.6609660076592,25.2349504662237,22.7944176062982,16.4899926782923,0,0,0.983528546038072,1.93155722413313,0,0.586058432961016,0,0.252470927204373,10.0962630213202,8.98009111882268,10.3403230911743,5.25731355495614,6.90675889655422,6.79383673893198,12.9539424535966,8.18316402151673,15.0209355619679,1.28528526568723,3.26462195979018,1.42452482933804,2.28041743095006,14.8473110675282,1.32745138339963,2.6705869977048,3.93020624054176,0.943025398779491,1.77181135728464,2.45948118355142,2.06742634534577,1.81766864738753,1.42598951353889,3.16036757935816,0,1.03135543248187,0.340439605753788,6.48219938512717,3.23396709456886,5.35842587578981,7.09360934569094,3.38900753443934,5.10101963866575,4.56697423671899,1.87737366450968,1.48282449604674,1.54369878638473,0.16488625294148,1.29171541356724,0.784068024066026,0.596861720015682,0.656563598980245,6.41257840585672,0.370850604021019,4.78438466233988,2.47664241555867,1.66675074632741,4.33247451110789,1.91371918809435,2.51655990527175,0.849892149969277,0.139951452323658,0.414599921413271,2.86401185404534,32.4244393420664,20.128627245558,16.4168118049138,16.3088870891286,14.6302917709939,12.9469772529428,13.8031271061311,7.85267825952089,7.38805347763219,0,0,3.13984746692355,2.81279433777066,3.11121901350476,2.58319646955462,1.35164900392623,2.22978753426933,1.69265700297135,1.36317147753424,0.241584120826006,0.288030006257865,5.37218905067903,6.08175645870493,7.80603274452687,3.63778304337826,4.833720783022,4.56967115996909,2.88469078847925,3.83992770653901,3.63479219813331,4.49620159264499,4.53717833115782,2.82627854145282,3.84847366561318,3.15567635890236,0.680191150845634,1.55390167361845,0.269141569828427,1.51096154727671,59.3092053678825,2.064507229963,6.41030684935428,1.71494703263253,0.501572104035363,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,3.00983307994112,3.99024873401031,5.12200817262403,4.37592090722929,4.82110274044359,1.47074806760011,3.77819437262746,3.91466608753899,2.24643446714271,4.54854981174835,3.54871019846336,2.26351609663291,3.93294331373506,2.75308155340938,2.35485422718014,3.33405583898152,4.40360438590451,3.47236596834669,4.53294490883637,3.09117732282234,5.48590803816665,3.72699192934609,3.09967046931517,5.23247099876383,3.76437521661322,2.96151127620868,4.75612729469209,5.5244639401947,4.20992752922171,3.92799590160417,3.6776855618494,4.23569274214923,2.86461730218783,3.40861050609125,4.05103883060397,2.74791635731741,3.97683734357194,4.08255002691767,2.10417165275728,0.661774257358546,0.927471342481686
|short_description=p3@Pde5a
}}

Revision as of 23:28, 5 August 2015

Short description:p3@Pde5a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pde5a_5end
Coexpression cluster:MCL_coexpression_mm9:1453
Association with transcript: 40bp_to_ENSMUST00000066728, NM_153422, uc008ret.2_5end
EntrezGene:242202
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pde5a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.65
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B95.70
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C13.17
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A63.09
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.73
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.10
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C62.45
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E22.59
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I521.76
intestine, embryo E13.CNhs11010.381-16D521.83
intestine, embryo E15.CNhs10602.976-16D813.79
intestine, embryo E16.CNhs10585.463-22H49.28
intestine, embryo E17.CNhs10582.482-18D35.11
intestine, embryo E18.CNhs10526.1289-20F77.42
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E96.59
intestine, neonate N06.CNhs11102.688-20B86.53
intestine, neonate N07.CNhs11095.720-20F26.17
intestine, neonate N10.CNhs11098.755-23A57.41
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G15.58
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F82.74
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.10
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F84.67
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D74.06
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B110.90
lung, embryo E12.CNhs10522.354-16G217.81
lung, embryo E14.CNhs10604.404-26F822.65
lung, embryo E15.CNhs11020.432-17C519.01
lung, embryo E16.CNhs10998.458-17B616.43
lung, embryo E17.CNhs10605.480-44A619.43
lung, embryo E18.CNhs10583.1287-20I632.61
lung, neonate N00.CNhs11224.640-42C612.49
lung, neonate N06.CNhs11212.683-20E551.39
lung, neonate N07.CNhs11111.715-19A340.53
lung, neonate N10.CNhs11219.750-23E640.66
lung, neonate N20.CNhs11109.822-18A425.23
lung, neonate N25.CNhs11119.1359-25C722.79
lung, neonate N30.CNhs11133.1394-42H216.49
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.34
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.91
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.95
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.02
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I73.26
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G614.85
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E66.48
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B97.09
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I16.41
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G24.78
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D14.33
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E332.42
stomach, embryo E15.CNhs10603.1252-16G820.13
stomach, embryo E16.CNhs11022.459-17D416.42
stomach, embryo E17.CNhs11006.1035-18D516.31
stomach, embryo E18.CNhs10999.1286-20C614.63
stomach, neonate N03.CNhs11193.1340-24B812.95
stomach, neonate N07.CNhs11210.718-18A913.80
stomach, neonate N25.CNhs11104.1355-25E47.85
stomach, neonate N30.CNhs11134.1386-42I17.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.14
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G53.11
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B72.23
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I27.81
thymus, embryo E16.CNhs11002.456-26C53.64
thymus, embryo E17.CNhs10581.478-18C14.83
thymus, embryo E18.CNhs10595.1273-19G44.57
thymus, neonate N02.CNhs11181.1541-43F82.88
thymus, neonate N03.CNhs11137.2104-43C73.84
thymus, neonate N06.CNhs11197.681-26C43.63
thymus, neonate N07.CNhs11211.713-19D34.50
thymus, neonate N10.CNhs11194.748-24E44.54
thymus, neonate N20.CNhs11186.820-7A22.83
thymus, neonate N25.CNhs11125.1362-25G73.85
thymus, neonate N30.CNhs11132.1393-42G23.16
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E459.31
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I83.01
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D24.38
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.40
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C24.08
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
subdivision of digestive tract6.64e-15114
digestive system9.20e-15116
digestive tract9.20e-15116
primitive gut9.20e-15116
endoderm-derived structure1.55e-14118
endoderm1.55e-14118
presumptive endoderm1.55e-14118
gastrointestinal system4.89e-1347
lung1.04e-1014
respiratory tube1.04e-1014
respiration organ1.04e-1014
pair of lungs1.04e-1014
lung primordium1.04e-1014
lung bud1.04e-1014
epithelial fold6.03e-1020
thoracic cavity element3.56e-0917
thoracic segment organ3.56e-0917
thoracic cavity3.56e-0917
thoracic segment of trunk3.56e-0917
respiratory primordium3.56e-0917
endoderm of foregut3.56e-0917
epithelial bud2.42e-0817
intestine3.96e-0831
embryo1.06e-07320
respiratory tract1.55e-0741
foregut4.89e-0780
respiratory system5.32e-0742
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