FFCP PHASE1:Mm9::chr1:78534537..78534547,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=284|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:78534537..78534547,+|id=chr1:78534537..78534547,+|ontology_enrichment_celltype=CL:0000791!2.04e-16!9;CL:0000789!2.04e-16!9;CL:0002420!2.04e-16!9;CL:0002419!2.04e-16!9;CL:0000790!2.04e-16!9;CL:0000838!9.76e-16!12;CL:0000542!2.04e-14!13;CL:0000051!2.04e-14!13;CL:0000624!1.08e-13!8;CL:0000084!3.10e-13!11;CL:0000827!3.10e-13!11;CL:0000738!1.08e-10!17;CL:0002087!1.08e-10!17;CL:0002031!1.45e-08!25;CL:0000893!1.79e-08!6;CL:0002489!1.79e-08!6;CL:0000898!1.79e-08!6;CL:0000809!1.79e-08!6;CL:0000810!1.79e-08!6;CL:0000895!1.79e-08!6;CL:0000808!1.79e-08!6;CL:0000894!1.79e-08!6;CL:0000806!1.79e-08!6;CL:0000807!1.79e-08!6;CL:0000805!1.79e-08!6;CL:0002425!1.79e-08!6;CL:0002436!1.79e-08!6;CL:0002427!1.79e-08!6;CL:0002428!1.79e-08!6;CL:0002429!1.79e-08!6;CL:0002433!1.79e-08!6;CL:0002431!1.79e-08!6;CL:0002432!1.79e-08!6|ontology_enrichment_celltype_v019_2=CL:0000838,1.18e-36,12;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000791,1.59e-31,9;CL:0000789,1.59e-31,9;CL:0002420,1.59e-31,9;CL:0002419,1.59e-31,9;CL:0000790,1.59e-31,9;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0000084,5.88e-26,11;CL:0000827,5.88e-26,11;CL:0000624,2.07e-20,8;CL:0000625,1.16e-18,1;CL:0000945,1.74e-18,1;CL:0000236,1.74e-18,1;CL:0000826,1.74e-18,1;CL:0000815,2.59e-18,1;CL:0000792,2.59e-18,1;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!9.42e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.29e-10,46|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.29123323441576,0.703943610758334,0.468129052643987,0,0,7.53283211697305,0.524522414513984,0,0,0,0,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,2.01339127269284,4.35217285206807,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:78534537..78534547,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=284 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:78534537..78534547,+ | |||
|description=CAGE_peak_at_chr1:78534537..78534547,+ | |||
|id=chr1:78534537..78534547,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.04e-16!9;CL:0000789!2.04e-16!9;CL:0002420!2.04e-16!9;CL:0002419!2.04e-16!9;CL:0000790!2.04e-16!9;CL:0000838!9.76e-16!12;CL:0000542!2.04e-14!13;CL:0000051!2.04e-14!13;CL:0000624!1.08e-13!8;CL:0000084!3.10e-13!11;CL:0000827!3.10e-13!11;CL:0000738!1.08e-10!17;CL:0002087!1.08e-10!17;CL:0002031!1.45e-08!25;CL:0000893!1.79e-08!6;CL:0002489!1.79e-08!6;CL:0000898!1.79e-08!6;CL:0000809!1.79e-08!6;CL:0000810!1.79e-08!6;CL:0000895!1.79e-08!6;CL:0000808!1.79e-08!6;CL:0000894!1.79e-08!6;CL:0000806!1.79e-08!6;CL:0000807!1.79e-08!6;CL:0000805!1.79e-08!6;CL:0002425!1.79e-08!6;CL:0002436!1.79e-08!6;CL:0002427!1.79e-08!6;CL:0002428!1.79e-08!6;CL:0002429!1.79e-08!6;CL:0002433!1.79e-08!6;CL:0002431!1.79e-08!6;CL:0002432!1.79e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.18e-36,12;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000791,1.59e-31,9;CL:0000789,1.59e-31,9;CL:0002420,1.59e-31,9;CL:0002419,1.59e-31,9;CL:0000790,1.59e-31,9;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0000084,5.88e-26,11;CL:0000827,5.88e-26,11;CL:0000624,2.07e-20,8;CL:0000625,1.16e-18,1;CL:0000945,1.74e-18,1;CL:0000236,1.74e-18,1;CL:0000826,1.74e-18,1;CL:0000815,2.59e-18,1;CL:0000792,2.59e-18,1;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!9.42e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.29e-10,46 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.29123323441576,0.703943610758334,0.468129052643987,0,0,7.53283211697305,0.524522414513984,0,0,0,0,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,2.01339127269284,4.35217285206807,3.6970317905671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0.448026887097336,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.586058432961016,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:78534537..78534547,+ | |||
}} |
Latest revision as of 01:19, 6 August 2015
Short description: | p@chr1:78534537..78534547, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:78534537..78534547, + |
Coexpression cluster: | MCL_coexpression_mm9:284 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.18e-36 | 12 |
lymphocyte | 6.63e-34 | 13 |
common lymphoid progenitor | 6.63e-34 | 13 |
mature alpha-beta T cell | 1.59e-31 | 9 |
alpha-beta T cell | 1.59e-31 | 9 |
immature T cell | 1.59e-31 | 9 |
mature T cell | 1.59e-31 | 9 |
immature alpha-beta T cell | 1.59e-31 | 9 |
leukocyte | 3.95e-26 | 17 |
nongranular leukocyte | 3.95e-26 | 17 |
T cell | 5.88e-26 | 11 |
pro-T cell | 5.88e-26 | 11 |
CD4-positive, alpha-beta T cell | 2.07e-20 | 8 |
CD8-positive, alpha-beta T cell | 1.16e-18 | 1 |
lymphocyte of B lineage | 1.74e-18 | 1 |
B cell | 1.74e-18 | 1 |
pro-B cell | 1.74e-18 | 1 |
regulatory T cell | 2.59e-18 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.59e-18 | 1 |
hematopoietic lineage restricted progenitor cell | 5.10e-18 | 25 |
hematopoietic cell | 3.12e-14 | 32 |
hematopoietic oligopotent progenitor cell | 3.12e-14 | 32 |
hematopoietic stem cell | 3.12e-14 | 32 |
hematopoietic multipotent progenitor cell | 3.12e-14 | 32 |
connective tissue cell | 4.29e-10 | 46 |
mesenchymal cell | 4.29e-10 | 46 |
motile cell | 1.10e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.29e-10 | 46 |