FFCP PHASE1:Mm9::chr6:68387870..68387886,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=372|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:68387870..68387886,+|id=chr6:68387870..68387886,+|ontology_enrichment_celltype=CL:0000553!4.93e-18!6;CL:0000556!4.93e-18!6;CL:0000050!8.95e-12!9;CL:0002027!1.05e-09!3;CL:0002006!1.05e-09!3;CL:0002024!1.05e-09!3;CL:0000414!1.70e-09!11;CL:0000839!6.45e-08!13|ontology_enrichment_celltype_v019_2=CL:0000553,7.84e-34,6;CL:0000556,7.84e-34,6;CL:0000050,1.24e-22,9;CL:0000839,1.03e-15,13;CL:0000763,8.73e-13,16;CL:0002027,7.41e-12,3;CL:0002006,7.41e-12,3;CL:0002024,7.41e-12,3;CL:0002031,1.78e-11,25;CL:0000049,8.94e-11,19;CL:0000945,4.39e-09,1;CL:0000236,4.39e-09,1;CL:0000826,4.39e-09,1;CL:0000988,6.37e-09,32;CL:0002032,6.37e-09,32;CL:0000037,6.37e-09,32;CL:0000837,6.37e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002529!9.31e-12!6;UBERON:0007823!1.84e-09!5;UBERON:0001474!1.89e-09!22;UBERON:0004765!1.89e-09!22;UBERON:0001434!1.89e-09!22;UBERON:0002465!3.37e-09!3;UBERON:0005418!3.51e-09!5;UBERON:0002472!3.51e-09!5;UBERON:0008784!3.51e-09!5;UBERON:0006058!3.51e-09!5;UBERON:0004709!3.51e-09!5;UBERON:0005420!3.51e-09!5;UBERON:0006057!3.51e-09!5;UBERON:0000978!3.51e-09!5;UBERON:0002103!3.51e-09!5;UBERON:0000376!3.51e-09!5;UBERON:0000154!3.51e-09!5;UBERON:0005730!3.51e-09!5;UBERON:0002193!7.74e-09!48;UBERON:0007023!9.37e-08!51;UBERON:0002204!2.27e-07!32;UBERON:0000981!6.27e-07!4;UBERON:0002495!6.27e-07!4;UBERON:0003608!6.27e-07!4;UBERON:0003826!6.27e-07!4;UBERON:0008202!6.27e-07!4;UBERON:0004375!6.27e-07!4;UBERON:0002428!6.27e-07!4;UBERON:0003464!6.27e-07!4;UBERON:0003606!6.27e-07!4;UBERON:0009749!6.27e-07!4;UBERON:0003860!6.27e-07!4;UBERON:0005856!6.27e-07!4;UBERON:0005866!6.27e-07!4;UBERON:0007828!6.27e-07!4;UBERON:0005254!6.27e-07!4;UBERON:0001271!6.27e-07!4;UBERON:0002091!6.27e-07!4;UBERON:0001464!6.27e-07!4;UBERON:0003285!6.27e-07!4;UBERON:0010129!6.27e-07!4;UBERON:0006234!6.27e-07!4|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.42e-13,22;UBERON:0004765,3.42e-13,22;UBERON:0001434,3.42e-13,22;UBERON:0002371,8.73e-13,16;UBERON:0000029,3.04e-09,1;UBERON:0001097,3.04e-09,1;UBERON:0003968,3.04e-09,1;UBERON:0001467,3.04e-09,1;UBERON:0002204,5.21e-09,32;UBERON:0002193,6.43e-08,48;UBERON:0002405,6.43e-08,48|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,1.82227740650843,0.699561878128147,2.05050407482854,4.52477630898938,1.69755860719212,0,0,0,0.95995453676044,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,2.65383165584962,0,0.220841518460394,0.484875253135222,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39219233116994,0,0,0,0,0.686334519619568,0,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:68387870..68387886,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=372 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:68387870..68387886,+ | |||
|description=CAGE_peak_at_chr6:68387870..68387886,+ | |||
|id=chr6:68387870..68387886,+ | |||
|ontology_enrichment_celltype=CL:0000553!4.93e-18!6;CL:0000556!4.93e-18!6;CL:0000050!8.95e-12!9;CL:0002027!1.05e-09!3;CL:0002006!1.05e-09!3;CL:0002024!1.05e-09!3;CL:0000414!1.70e-09!11;CL:0000839!6.45e-08!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,7.84e-34,6;CL:0000556,7.84e-34,6;CL:0000050,1.24e-22,9;CL:0000839,1.03e-15,13;CL:0000763,8.73e-13,16;CL:0002027,7.41e-12,3;CL:0002006,7.41e-12,3;CL:0002024,7.41e-12,3;CL:0002031,1.78e-11,25;CL:0000049,8.94e-11,19;CL:0000945,4.39e-09,1;CL:0000236,4.39e-09,1;CL:0000826,4.39e-09,1;CL:0000988,6.37e-09,32;CL:0002032,6.37e-09,32;CL:0000037,6.37e-09,32;CL:0000837,6.37e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002529!9.31e-12!6;UBERON:0007823!1.84e-09!5;UBERON:0001474!1.89e-09!22;UBERON:0004765!1.89e-09!22;UBERON:0001434!1.89e-09!22;UBERON:0002465!3.37e-09!3;UBERON:0005418!3.51e-09!5;UBERON:0002472!3.51e-09!5;UBERON:0008784!3.51e-09!5;UBERON:0006058!3.51e-09!5;UBERON:0004709!3.51e-09!5;UBERON:0005420!3.51e-09!5;UBERON:0006057!3.51e-09!5;UBERON:0000978!3.51e-09!5;UBERON:0002103!3.51e-09!5;UBERON:0000376!3.51e-09!5;UBERON:0000154!3.51e-09!5;UBERON:0005730!3.51e-09!5;UBERON:0002193!7.74e-09!48;UBERON:0007023!9.37e-08!51;UBERON:0002204!2.27e-07!32;UBERON:0000981!6.27e-07!4;UBERON:0002495!6.27e-07!4;UBERON:0003608!6.27e-07!4;UBERON:0003826!6.27e-07!4;UBERON:0008202!6.27e-07!4;UBERON:0004375!6.27e-07!4;UBERON:0002428!6.27e-07!4;UBERON:0003464!6.27e-07!4;UBERON:0003606!6.27e-07!4;UBERON:0009749!6.27e-07!4;UBERON:0003860!6.27e-07!4;UBERON:0005856!6.27e-07!4;UBERON:0005866!6.27e-07!4;UBERON:0007828!6.27e-07!4;UBERON:0005254!6.27e-07!4;UBERON:0001271!6.27e-07!4;UBERON:0002091!6.27e-07!4;UBERON:0001464!6.27e-07!4;UBERON:0003285!6.27e-07!4;UBERON:0010129!6.27e-07!4;UBERON:0006234!6.27e-07!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.42e-13,22;UBERON:0004765,3.42e-13,22;UBERON:0001434,3.42e-13,22;UBERON:0002371,8.73e-13,16;UBERON:0000029,3.04e-09,1;UBERON:0001097,3.04e-09,1;UBERON:0003968,3.04e-09,1;UBERON:0001467,3.04e-09,1;UBERON:0002204,5.21e-09,32;UBERON:0002193,6.43e-08,48;UBERON:0002405,6.43e-08,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6648780945253,1.82227740650843,0.699561878128147,2.05050407482854,4.52477630898938,1.69755860719212,0,0,0,0.95995453676044,0.22940928106717,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.8125651855302,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,2.65383165584962,0,0.220841518460394,0.484875253135222,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39219233116994,0,0,0,0,0.686334519619568,0,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:68387870..68387886,+ | |||
}} |
Latest revision as of 01:23, 6 August 2015
Short description: | p@chr6:68387870..68387886, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:68387870..68387886, + |
Coexpression cluster: | MCL_coexpression_mm9:372 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 7.84e-34 | 6 |
megakaryocyte | 7.84e-34 | 6 |
megakaryocyte-erythroid progenitor cell | 1.24e-22 | 9 |
myeloid lineage restricted progenitor cell | 1.03e-15 | 13 |
myeloid cell | 8.73e-13 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 7.41e-12 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 7.41e-12 | 3 |
Kit-positive megakaryocyte progenitor cell | 7.41e-12 | 3 |
hematopoietic lineage restricted progenitor cell | 1.78e-11 | 25 |
common myeloid progenitor | 8.94e-11 | 19 |
lymphocyte of B lineage | 4.39e-09 | 1 |
B cell | 4.39e-09 | 1 |
pro-B cell | 4.39e-09 | 1 |
hematopoietic cell | 6.37e-09 | 32 |
hematopoietic oligopotent progenitor cell | 6.37e-09 | 32 |
hematopoietic stem cell | 6.37e-09 | 32 |
hematopoietic multipotent progenitor cell | 6.37e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.42e-13 | 22 |
skeletal element | 3.42e-13 | 22 |
skeletal system | 3.42e-13 | 22 |
bone marrow | 8.73e-13 | 16 |
lymph node | 3.04e-09 | 1 |
axillary lymph node | 3.04e-09 | 1 |
peripheral lymph node | 3.04e-09 | 1 |
shoulder | 3.04e-09 | 1 |
musculoskeletal system | 5.21e-09 | 32 |
hemolymphoid system | 6.43e-08 | 48 |
immune system | 6.43e-08 | 48 |