FFCP PHASE1:Mm9::chr13:51740739..51740761,+: Difference between revisions
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{{FFCP|EntrezGene=66197|HGNC=|UniProt=|association_with_transcript=-66bp_to_uc007qmi.2_5end|description=CAGE_peak_5_at_Cks2_5end|id=chr13:51740739..51740761,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,2.75e-17,19;CL:0002027,3.67e-10,3;CL:0002006,3.67e-10,3;CL:0002024,3.67e-10,3;CL:0000988,4.54e-10,32;CL:0002032,4.54e-10,32;CL:0000037,4.54e-10,32;CL:0000837,4.54e-10,32;CL:0000349,1.40e-09,3;CL:0000351,1.40e-09,3;CL:0002320,6.21e-09,46;CL:0000134,6.21e-09,46;CL:0000219,1.70e-07,54;CL:0000763,4.19e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!7.18e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.40e-09,3;UBERON:0000307,1.40e-09,3;UBERON:0007010,1.40e-09,3;UBERON:0002384,6.21e-09,46;UBERON:0002371,4.19e-07,16|phase1_expression=0,0.348975407639361,0,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,1.41732687172878,2.79824751251259,0,0,0,0.0850432901510698,0.297872853602656,0,0.319984845586813,0,0,0,0,0.570070258369122,0,0,0,0.61506478758457,0,0,0.332469290716985,0.204169356262369,0,0,0.523523743973798,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0.219686182734472,0,0.279972843250725,0,0.335565212115473,0.725362142011344,0.672187598284928,0.257259436035947,0.573066879877513,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.289864488701678,0,2.719885334831,0.539703191637817,0,0.448026887097336,0,0.170430322578058,0.519572009205738,0.35333957451034,0,0,0,0,0.649473123033642,0.253359865475099,2.52762222507392,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,3.23500836165985,1.79970819298022,1.52484272487678,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0.650602214813519,0.459804208866946,0.360124259610698,0,0.204109497453984,0,0.187403449119458,0,0.431135985865684,0.378212160335639,0.175951124163949,0.43839146485515,0,0,0,0.199034266818493,1.40442637462647,1.80143534980301,0.568326998791185,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0.948339504765408,0.456994050438915,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.470996183524124,0.493588655687202,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,1.45921704097532,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0.538192240565737,0.482443521363367,0,0,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.341741761595705,0.412773735926445,0,0.376736914009382,0.410082683163076,0.228778173206523,0,0.559805809294632,0.414599921413271,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.598066184175915,0.165458490457098,0.194451188344048,0,0,0,0.13020438484395,0.104859344425711,1.20792060413003,0.576060012515731,0.316011120628178,0,0.718976700153791,0.129920822977795,0.537080087002444,0.198681354781265,0.120195449519969,0.295379054349154,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.233753804363138,0,1.10992976687032,0.897138566094757,1.34307693091263,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0,0,0.64183841918363,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0.192906610981141,0,0.233931608445408,0,0.382576664137687,0,0|short_description=p5@Cks2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66197 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-66bp_to_uc007qmi.2_5end | |||
|cluster_id=chr13:51740739..51740761,+ | |||
|description=CAGE_peak_5_at_Cks2_5end | |||
|id=chr13:51740739..51740761,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,2.75e-17,19;CL:0002027,3.67e-10,3;CL:0002006,3.67e-10,3;CL:0002024,3.67e-10,3;CL:0000988,4.54e-10,32;CL:0002032,4.54e-10,32;CL:0000037,4.54e-10,32;CL:0000837,4.54e-10,32;CL:0000349,1.40e-09,3;CL:0000351,1.40e-09,3;CL:0002320,6.21e-09,46;CL:0000134,6.21e-09,46;CL:0000219,1.70e-07,54;CL:0000763,4.19e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!7.18e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,1.40e-09,3;UBERON:0000307,1.40e-09,3;UBERON:0007010,1.40e-09,3;UBERON:0002384,6.21e-09,46;UBERON:0002371,4.19e-07,16 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0.233612640595526,0,0.140788722151667,0,0,0,0,0.0874204024189974,0,1.41732687172878,2.79824751251259,0,0,0,0.0850432901510698,0.297872853602656,0,0.319984845586813,0,0,0,0,0.570070258369122,0,0,0,0.61506478758457,0,0,0.332469290716985,0.204169356262369,0,0,0.523523743973798,0,0,0,0.251793635951155,0.101376931219515,0,0,0,0.219686182734472,0,0.279972843250725,0,0.335565212115473,0.725362142011344,0.672187598284928,0.257259436035947,0.573066879877513,0,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0.289864488701678,0,2.719885334831,0.539703191637817,0,0.448026887097336,0,0.170430322578058,0.519572009205738,0.35333957451034,0,0,0,0,0.649473123033642,0.253359865475099,2.52762222507392,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,3.23500836165985,1.79970819298022,1.52484272487678,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0.650602214813519,0.459804208866946,0.360124259610698,0,0.204109497453984,0,0.187403449119458,0,0.431135985865684,0.378212160335639,0.175951124163949,0.43839146485515,0,0,0,0.199034266818493,1.40442637462647,1.80143534980301,0.568326998791185,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0.102904612379284,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0.502670417600539,0,0,0,0,0,0.948339504765408,0.456994050438915,0,0,0,0.140271639780637,0.0632365371242573,0.147610147979602,0.470996183524124,0.493588655687202,0,0.333690211432188,0.196558995113203,0.224862112384854,0.202860121388503,0,0.25462585178142,0,1.45921704097532,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0.538192240565737,0.482443521363367,0,0,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0.341741761595705,0.412773735926445,0,0.376736914009382,0.410082683163076,0.228778173206523,0,0.559805809294632,0.414599921413271,0,0.158167996790568,0,0.108005340821801,0.209088296014469,0,0,0.0826534557253359,0,0.129614973291793,0,0,0.598066184175915,0.165458490457098,0.194451188344048,0,0,0,0.13020438484395,0.104859344425711,1.20792060413003,0.576060012515731,0.316011120628178,0,0.718976700153791,0.129920822977795,0.537080087002444,0.198681354781265,0.120195449519969,0.295379054349154,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.233753804363138,0,1.10992976687032,0.897138566094757,1.34307693091263,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0,0,0.64183841918363,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0.192906610981141,0,0.233931608445408,0,0.382576664137687,0,0 | |||
|short_description=p5@Cks2 | |||
}} |
Revision as of 02:24, 6 August 2015
Short description: | p5@Cks2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cks2_5end |
Coexpression cluster: | NA |
Association with transcript: | -66bp_to_uc007qmi.2_5end |
EntrezGene: | 66197 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 2.75e-17 | 19 |
CD9-positive, CD41-positive megakaryocyte cell | 3.67e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 3.67e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 3.67e-10 | 3 |
hematopoietic cell | 4.54e-10 | 32 |
hematopoietic oligopotent progenitor cell | 4.54e-10 | 32 |
hematopoietic stem cell | 4.54e-10 | 32 |
hematopoietic multipotent progenitor cell | 4.54e-10 | 32 |
extraembryonic cell | 1.40e-09 | 3 |
trophoblast cell | 1.40e-09 | 3 |
connective tissue cell | 6.21e-09 | 46 |
mesenchymal cell | 6.21e-09 | 46 |
motile cell | 1.70e-07 | 54 |
myeloid cell | 4.19e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 1.40e-09 | 3 |
blastula | 1.40e-09 | 3 |
cleaving embryo | 1.40e-09 | 3 |
connective tissue | 6.21e-09 | 46 |
bone marrow | 4.19e-07 | 16 |