FFCP PHASE1:Mm9::chr16:18588973..18589002,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=59|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:18588973..18589002,-|id=chr16:18588973..18589002,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,6.64e-11,3;CL:0002202,6.64e-11,3;CL:0000069,6.64e-11,3;CL:0002632,6.64e-11,3;CL:0002368,6.64e-11,3;CL:0000307,6.64e-11,3;CL:0000377,6.64e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!5.92e-15!17;UBERON:0005181!5.92e-15!17;UBERON:0002224!5.92e-15!17;UBERON:0000915!5.92e-15!17;UBERON:0008947!5.92e-15!17;UBERON:0003258!5.92e-15!17;UBERON:0002048!2.19e-12!14;UBERON:0000117!2.19e-12!14;UBERON:0000171!2.19e-12!14;UBERON:0000170!2.19e-12!14;UBERON:0005597!2.19e-12!14;UBERON:0000118!2.19e-12!14;UBERON:0005153!1.25e-10!17|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.88e-37,17;UBERON:0005181,1.88e-37,17;UBERON:0002224,1.88e-37,17;UBERON:0000915,1.88e-37,17;UBERON:0008947,1.88e-37,17;UBERON:0003258,1.88e-37,17;UBERON:0002048,3.05e-28,14;UBERON:0000117,3.05e-28,14;UBERON:0000171,3.05e-28,14;UBERON:0000170,3.05e-28,14;UBERON:0005597,3.05e-28,14;UBERON:0000118,3.05e-28,14;UBERON:0005153,6.50e-23,17;UBERON:0005157,3.52e-19,20;UBERON:0000065,2.28e-16,41;UBERON:0001004,6.57e-16,42;UBERON:0000310,3.82e-14,6;UBERON:0001443,3.82e-14,6;UBERON:0000014,4.56e-12,5;UBERON:0001003,4.56e-12,5;UBERON:0002097,4.56e-12,5;UBERON:0002199,4.56e-12,5;UBERON:0007029,4.56e-12,5;UBERON:0007376,4.56e-12,5;UBERON:0002416,4.56e-12,5;UBERON:0007383,4.56e-12,5;UBERON:0003126,6.64e-11,3;UBERON:0001005,6.64e-11,3;UBERON:0007196,6.64e-11,3;UBERON:0001558,6.64e-11,3;UBERON:0009569,1.18e-07,66;UBERON:0001041,5.74e-07,80|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0.889294796111139,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0.191690942036473,0,0,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0.284743361598206,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,2.16491041011214,1.26679932737549,1.51657333504435,0,1.03575153458869,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.915001205637253,0,0,0,0.41557608911912,0.162241263067758,0.101839363850316,0.497627882440372,0,0,0,0.229902104433473,0,0.150704817835715,0,0,0.374806898238915,0,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0.757965647081939,2.77040459951444,1.18821560042632,1.40814148973101,1.67506257441816,2.38043640886014,1.17080188714679,1.41871629695572,0.221464689648775,0.797273843287435,1.96635977658886,2.41758974612254,3.32692834737477,0,0,0,0,0.321101179975584,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.258717367565509,0,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0,0.441056796109924,1.6488625294148,0.807322133479528,2.0506394475573,3.10368094408155,4.76008609260678,0.291480836629851,0.556275906031529,0,0,0.555583582109135,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0.165458490457098,0.777804753376191,0.516639293910924,0.337912250981556,0.352071715937262,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,26.7541852665949,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0,0.243106717068294,0.419226325255965,0.367687016900028,0.44449345560323,0.206035057238894,0,0.505394423527595,0.25347929989024,0.754505365544305,0.561849044819294,0.576226371643824,0.689225627467359,0.476293691283074,0.927074607558844,0.38581844092741,1.64834360321323,0.441596760403192,0,0.532427418478012,0,0.436039249896986,0.470546902076653,0.423073039458382,0.548783918618318,0.263069711437843,0.814824683075171,0,0.474540072496697,1.18205378850676,0.409231043169689,1.08455788830176,0.964533054905707,1.49886346762768,1.40358965067245,0.429742108096597,0.191288332068843,0,0|short_description=p@chr16:18588973..18589002,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=59 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:18588973..18589002,- | |||
|description=CAGE_peak_at_chr16:18588973..18589002,- | |||
|id=chr16:18588973..18589002,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.64e-11,3;CL:0002202,6.64e-11,3;CL:0000069,6.64e-11,3;CL:0002632,6.64e-11,3;CL:0002368,6.64e-11,3;CL:0000307,6.64e-11,3;CL:0000377,6.64e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!5.92e-15!17;UBERON:0005181!5.92e-15!17;UBERON:0002224!5.92e-15!17;UBERON:0000915!5.92e-15!17;UBERON:0008947!5.92e-15!17;UBERON:0003258!5.92e-15!17;UBERON:0002048!2.19e-12!14;UBERON:0000117!2.19e-12!14;UBERON:0000171!2.19e-12!14;UBERON:0000170!2.19e-12!14;UBERON:0005597!2.19e-12!14;UBERON:0000118!2.19e-12!14;UBERON:0005153!1.25e-10!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.88e-37,17;UBERON:0005181,1.88e-37,17;UBERON:0002224,1.88e-37,17;UBERON:0000915,1.88e-37,17;UBERON:0008947,1.88e-37,17;UBERON:0003258,1.88e-37,17;UBERON:0002048,3.05e-28,14;UBERON:0000117,3.05e-28,14;UBERON:0000171,3.05e-28,14;UBERON:0000170,3.05e-28,14;UBERON:0005597,3.05e-28,14;UBERON:0000118,3.05e-28,14;UBERON:0005153,6.50e-23,17;UBERON:0005157,3.52e-19,20;UBERON:0000065,2.28e-16,41;UBERON:0001004,6.57e-16,42;UBERON:0000310,3.82e-14,6;UBERON:0001443,3.82e-14,6;UBERON:0000014,4.56e-12,5;UBERON:0001003,4.56e-12,5;UBERON:0002097,4.56e-12,5;UBERON:0002199,4.56e-12,5;UBERON:0007029,4.56e-12,5;UBERON:0007376,4.56e-12,5;UBERON:0002416,4.56e-12,5;UBERON:0007383,4.56e-12,5;UBERON:0003126,6.64e-11,3;UBERON:0001005,6.64e-11,3;UBERON:0007196,6.64e-11,3;UBERON:0001558,6.64e-11,3;UBERON:0009569,1.18e-07,66;UBERON:0001041,5.74e-07,80 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0,0.889294796111139,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0.220868540951614,0,0.191690942036473,0,0,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0.56276261003168,0.30559649555362,0.294628585473668,0.284743361598206,0.186399445825301,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0.281686839553361,0,0,0,2.16491041011214,1.26679932737549,1.51657333504435,0,1.03575153458869,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0.915001205637253,0,0,0,0.41557608911912,0.162241263067758,0.101839363850316,0.497627882440372,0,0,0,0.229902104433473,0,0.150704817835715,0,0,0.374806898238915,0,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0,0,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0.757965647081939,2.77040459951444,1.18821560042632,1.40814148973101,1.67506257441816,2.38043640886014,1.17080188714679,1.41871629695572,0.221464689648775,0.797273843287435,1.96635977658886,2.41758974612254,3.32692834737477,0,0,0,0,0.321101179975584,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.258717367565509,0,0.354680467284547,0.178368817602071,0,0.304464949114599,0,0,0.441056796109924,1.6488625294148,0.807322133479528,2.0506394475573,3.10368094408155,4.76008609260678,0.291480836629851,0.556275906031529,0,0,0.555583582109135,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0.165458490457098,0.777804753376191,0.516639293910924,0.337912250981556,0.352071715937262,0.2604087696879,0.104859344425711,0.241584120826006,0,0,0,0,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,26.7541852665949,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0,0.243106717068294,0.419226325255965,0.367687016900028,0.44449345560323,0.206035057238894,0,0.505394423527595,0.25347929989024,0.754505365544305,0.561849044819294,0.576226371643824,0.689225627467359,0.476293691283074,0.927074607558844,0.38581844092741,1.64834360321323,0.441596760403192,0,0.532427418478012,0,0.436039249896986,0.470546902076653,0.423073039458382,0.548783918618318,0.263069711437843,0.814824683075171,0,0.474540072496697,1.18205378850676,0.409231043169689,1.08455788830176,0.964533054905707,1.49886346762768,1.40358965067245,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p@chr16:18588973..18589002,- | |||
}} |
Latest revision as of 03:15, 6 August 2015
Short description: | p@chr16:18588973..18589002, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:18588973..18589002, - |
Coexpression cluster: | MCL_coexpression_mm9:59 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.64e-11 | 3 |
epithelial cell of tracheobronchial tree | 6.64e-11 | 3 |
branched duct epithelial cell | 6.64e-11 | 3 |
epithelial cell of lower respiratory tract | 6.64e-11 | 3 |
respiratory epithelial cell | 6.64e-11 | 3 |
tracheal epithelial cell | 6.64e-11 | 3 |
tracheoblast | 6.64e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 1.88e-37 | 17 |
thoracic segment organ | 1.88e-37 | 17 |
thoracic cavity | 1.88e-37 | 17 |
thoracic segment of trunk | 1.88e-37 | 17 |
respiratory primordium | 1.88e-37 | 17 |
endoderm of foregut | 1.88e-37 | 17 |
lung | 3.05e-28 | 14 |
respiratory tube | 3.05e-28 | 14 |
respiration organ | 3.05e-28 | 14 |
pair of lungs | 3.05e-28 | 14 |
lung primordium | 3.05e-28 | 14 |
lung bud | 3.05e-28 | 14 |
epithelial bud | 6.50e-23 | 17 |
epithelial fold | 3.52e-19 | 20 |
respiratory tract | 2.28e-16 | 41 |
respiratory system | 6.57e-16 | 42 |
breast | 3.82e-14 | 6 |
chest | 3.82e-14 | 6 |
zone of skin | 4.56e-12 | 5 |
skin epidermis | 4.56e-12 | 5 |
skin of body | 4.56e-12 | 5 |
integument | 4.56e-12 | 5 |
surface | 4.56e-12 | 5 |
outer epithelium | 4.56e-12 | 5 |
integumental system | 4.56e-12 | 5 |
enveloping layer of ectoderm | 4.56e-12 | 5 |
trachea | 6.64e-11 | 3 |
respiratory airway | 6.64e-11 | 3 |
tracheobronchial tree | 6.64e-11 | 3 |
lower respiratory tract | 6.64e-11 | 3 |
subdivision of trunk | 1.18e-07 | 66 |
foregut | 5.74e-07 | 80 |