FFCP PHASE1:Mm9::chr16:23225407..23225420,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=2173|UniProt=Q8C9L1|association_with_transcript=-4bp_to_uc007ytn.1_5end|description=CAGE_peak_3_at_uc007ytn.1_5end|id=chr16:23225407..23225420,-|ontology_enrichment_celltype=CL:0000107!2.94e-08!9|ontology_enrichment_celltype_v019_2=CL:0000107,5.57e-39,9;CL:0000791,3.40e-13,9;CL:0000789,3.40e-13,9;CL:0002420,3.40e-13,9;CL:0002419,3.40e-13,9;CL:0000790,3.40e-13,9;CL:0000084,9.29e-11,11;CL:0000827,9.29e-11,11;CL:0000723,2.77e-10,91;CL:0000048,2.77e-10,91;CL:0000838,7.64e-10,12;CL:0000624,8.11e-10,8;CL:0000540,9.68e-10,33;CL:0000047,9.68e-10,33;CL:0000031,9.68e-10,33;CL:0000404,9.68e-10,33;CL:0000034,1.75e-09,97;CL:0000542,4.56e-09,13;CL:0000051,4.56e-09,13;CL:0002031,2.24e-08,25;CL:0000393,4.81e-08,39;CL:0000211,4.81e-08,39;CL:0002319,3.55e-07,43;CL:0000221,5.53e-07,44;CL:0000133,5.53e-07,44;CL:0000738,7.12e-07,17;CL:0002087,7.12e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!6.53e-09!27;UBERON:0000010!8.91e-09!11;UBERON:0002410!2.94e-08!9;UBERON:0005153!4.36e-07!17;UBERON:0002048!5.02e-07!14;UBERON:0000117!5.02e-07!14;UBERON:0000171!5.02e-07!14;UBERON:0000170!5.02e-07!14;UBERON:0005597!5.02e-07!14;UBERON:0000118!5.02e-07!14;UBERON:0000065!8.03e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.57e-39,9;UBERON:0000010,1.09e-31,11;UBERON:0000013,3.65e-14,3;UBERON:0000011,4.04e-14,3;UBERON:0010313,7.44e-14,3;UBERON:0002342,7.44e-14,3;UBERON:0002005,7.44e-14,3;UBERON:0005428,7.44e-14,3;UBERON:0005062,7.44e-14,3|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,0.563154888606667,0.468129052643987,0.34243593645101,0.239316476986009,2.9104124088305,3.75907730401689,0,0,0.699561878128147,1.10411757875383,1.23402990245165,0.84877930359606,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.65407546914134,0.219686182734472,0.194429899074283,0.55994568650145,0,0.167782606057736,2.17608642603403,2.35265659399725,0,0,0,0.809265843438391,0,0.633831403506179,0.338844532069132,0,0,0.988866362566974,0,0,0.384218305321555,0.518448061542388,0.405017814995072,0.210324961351382,0,0.220868540951614,0.367472397644862,0.383381884072945,0,0,0,0,0,0.274462930807229,0,0,0,0.30559649555362,0.294628585473668,0,0.186399445825301,0.37863096666592,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0.776813650941515,0.148442139064825,0.693941307064543,0,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0.173824320192276,0.255715457330331,0,0.162241263067758,0.407357455401265,0.124406970610093,0,0,0.260240885925407,0.689706313300419,0.360124259610698,0.452114453507145,0.340182495756639,0.896796041993948,0.281105173679186,0,0.646703978798527,0.378212160335639,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.414251545071004,0,0.36012412292203,0.473489471170421,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0.514523061896422,0,0,0,0.464473343720877,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0,0.210407459670956,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0.744281895337007,0,0,0,0,0.554259570499814,0.189491411770485,0.488894929326078,1.01847051465113,0.469380496577004,0.335012514883631,0.476087281772027,0.390267295715598,1.10344600874334,0.44292937929755,0.797273843287435,0.655453258862952,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0.551873492609465,0,0.35163505977661,0,0,1.89304931649754,1.56175497718655,1.07711698866399,1.19484398976276,1.55959071857676,1.98153571552183,1.21443210502468,1.16902343164525,2.76701444562566,0.642642632843614,0.283880170416537,0,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,0.535106452806212,0,0.608929898229199,0.23467170806371,0,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0.512612642393558,0.412773735926445,0,0,0.410082683163076,0.228778173206523,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.41326727862668,0,0.129614973291793,0,0.56369293868419,0.448549638131936,0,0,0.387479470433193,0,0.469428954583016,0.781226309063701,0.209718688851422,0,1.15212002503146,0.316011120628178,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0.240390899039938,0,0.706765149637033,0.228620419965,0.201652370273681,0.779663045918019,0.192423683280659,0.818138315270983,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0,0,0,0,0.515559547031063,0.685082519770642,0,0,0,0,0,0.103787347584177,0,0.512200817262403,0,0,0.183843508450014,0,0,0,0.505394423527595,0,0.565879024158229,0.37456602987953,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p3@uc007ytn.1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=2173 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C9L1 | |||
|association_with_transcript=-4bp_to_uc007ytn.1_5end | |||
|cluster_id=chr16:23225407..23225420,- | |||
|description=CAGE_peak_3_at_uc007ytn.1_5end | |||
|id=chr16:23225407..23225420,- | |||
|ontology_enrichment_celltype=CL:0000107!2.94e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.57e-39,9;CL:0000791,3.40e-13,9;CL:0000789,3.40e-13,9;CL:0002420,3.40e-13,9;CL:0002419,3.40e-13,9;CL:0000790,3.40e-13,9;CL:0000084,9.29e-11,11;CL:0000827,9.29e-11,11;CL:0000723,2.77e-10,91;CL:0000048,2.77e-10,91;CL:0000838,7.64e-10,12;CL:0000624,8.11e-10,8;CL:0000540,9.68e-10,33;CL:0000047,9.68e-10,33;CL:0000031,9.68e-10,33;CL:0000404,9.68e-10,33;CL:0000034,1.75e-09,97;CL:0000542,4.56e-09,13;CL:0000051,4.56e-09,13;CL:0002031,2.24e-08,25;CL:0000393,4.81e-08,39;CL:0000211,4.81e-08,39;CL:0002319,3.55e-07,43;CL:0000221,5.53e-07,44;CL:0000133,5.53e-07,44;CL:0000738,7.12e-07,17;CL:0002087,7.12e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!6.53e-09!27;UBERON:0000010!8.91e-09!11;UBERON:0002410!2.94e-08!9;UBERON:0005153!4.36e-07!17;UBERON:0002048!5.02e-07!14;UBERON:0000117!5.02e-07!14;UBERON:0000171!5.02e-07!14;UBERON:0000170!5.02e-07!14;UBERON:0005597!5.02e-07!14;UBERON:0000118!5.02e-07!14;UBERON:0000065!8.03e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,5.57e-39,9;UBERON:0000010,1.09e-31,11;UBERON:0000013,3.65e-14,3;UBERON:0000011,4.04e-14,3;UBERON:0010313,7.44e-14,3;UBERON:0002342,7.44e-14,3;UBERON:0002005,7.44e-14,3;UBERON:0005428,7.44e-14,3;UBERON:0005062,7.44e-14,3 | |||
|phase1_expression=0,0,0,0,0,0,0,2.7115897922731,0.563154888606667,0.468129052643987,0.34243593645101,0.239316476986009,2.9104124088305,3.75907730401689,0,0,0.699561878128147,1.10411757875383,1.23402990245165,0.84877930359606,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.65407546914134,0.219686182734472,0.194429899074283,0.55994568650145,0,0.167782606057736,2.17608642603403,2.35265659399725,0,0,0,0.809265843438391,0,0.633831403506179,0.338844532069132,0,0,0.988866362566974,0,0,0.384218305321555,0.518448061542388,0.405017814995072,0.210324961351382,0,0.220868540951614,0.367472397644862,0.383381884072945,0,0,0,0,0,0.274462930807229,0,0,0,0.30559649555362,0.294628585473668,0,0.186399445825301,0.37863096666592,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0.776813650941515,0.148442139064825,0.693941307064543,0,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628271760564322,0.173824320192276,0.255715457330331,0,0.162241263067758,0.407357455401265,0.124406970610093,0,0,0.260240885925407,0.689706313300419,0.360124259610698,0.452114453507145,0.340182495756639,0.896796041993948,0.281105173679186,0,0.646703978798527,0.378212160335639,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.414251545071004,0,0.36012412292203,0.473489471170421,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0.514523061896422,0,0,0,0.464473343720877,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0.203651327845314,0,0.210407459670956,0,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0.744281895337007,0,0,0,0,0.554259570499814,0.189491411770485,0.488894929326078,1.01847051465113,0.469380496577004,0.335012514883631,0.476087281772027,0.390267295715598,1.10344600874334,0.44292937929755,0.797273843287435,0.655453258862952,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0.551873492609465,0,0.35163505977661,0,0,1.89304931649754,1.56175497718655,1.07711698866399,1.19484398976276,1.55959071857676,1.98153571552183,1.21443210502468,1.16902343164525,2.76701444562566,0.642642632843614,0.283880170416537,0,0.162886959353576,0.494910368917606,0,0,0,0.188605079755898,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,0.535106452806212,0,0.608929898229199,0.23467170806371,0,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0.512612642393558,0.412773735926445,0,0,0.410082683163076,0.228778173206523,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.41326727862668,0,0.129614973291793,0,0.56369293868419,0.448549638131936,0,0,0.387479470433193,0,0.469428954583016,0.781226309063701,0.209718688851422,0,1.15212002503146,0.316011120628178,0,0.205421914329655,0,0.179026695667481,0.198681354781265,0.240390899039938,0,0.706765149637033,0.228620419965,0.201652370273681,0.779663045918019,0.192423683280659,0.818138315270983,0,0,0,0,0,0,0.36630324853453,0.214368379079066,0,0,0,0,0.515559547031063,0.685082519770642,0,0,0,0,0,0.103787347584177,0,0.512200817262403,0,0,0.183843508450014,0,0,0,0.505394423527595,0,0.565879024158229,0.37456602987953,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0,0.147198920134397,0,0.354951612318675,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p3@uc007ytn.1 | |||
}} |
Revision as of 05:35, 6 August 2015
Short description: | p3@uc007ytn.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_uc007ytn.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2173 |
Association with transcript: | -4bp_to_uc007ytn.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.57e-39 | 9 |
mature alpha-beta T cell | 3.40e-13 | 9 |
alpha-beta T cell | 3.40e-13 | 9 |
immature T cell | 3.40e-13 | 9 |
mature T cell | 3.40e-13 | 9 |
immature alpha-beta T cell | 3.40e-13 | 9 |
T cell | 9.29e-11 | 11 |
pro-T cell | 9.29e-11 | 11 |
somatic stem cell | 2.77e-10 | 91 |
multi fate stem cell | 2.77e-10 | 91 |
lymphoid lineage restricted progenitor cell | 7.64e-10 | 12 |
CD4-positive, alpha-beta T cell | 8.11e-10 | 8 |
neuron | 9.68e-10 | 33 |
neuronal stem cell | 9.68e-10 | 33 |
neuroblast | 9.68e-10 | 33 |
electrically signaling cell | 9.68e-10 | 33 |
stem cell | 1.75e-09 | 97 |
lymphocyte | 4.56e-09 | 13 |
common lymphoid progenitor | 4.56e-09 | 13 |
hematopoietic lineage restricted progenitor cell | 2.24e-08 | 25 |
electrically responsive cell | 4.81e-08 | 39 |
electrically active cell | 4.81e-08 | 39 |
neural cell | 3.55e-07 | 43 |
ectodermal cell | 5.53e-07 | 44 |
neurectodermal cell | 5.53e-07 | 44 |
leukocyte | 7.12e-07 | 17 |
nongranular leukocyte | 7.12e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 5.57e-39 | 9 |
peripheral nervous system | 1.09e-31 | 11 |
sympathetic nervous system | 3.65e-14 | 3 |
parasympathetic nervous system | 4.04e-14 | 3 |
neural crest-derived structure | 7.44e-14 | 3 |
neural crest | 7.44e-14 | 3 |
enteric nervous system | 7.44e-14 | 3 |
vagal neural crest | 7.44e-14 | 3 |
neural fold | 7.44e-14 | 3 |